mRNA_M-pyrifera_M_contig97313.22411.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: A0A3D5DD74_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DD74_9GAMM) HSP 1 Score: 387 bits (994), Expect = 1.070e-131 Identity = 166/236 (70.34%), Postives = 203/236 (86.02%), Query Frame = 1 Query: 1 FTAWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEK-RFGWEGMKIASFRGADIKVPGIANLKLFGEFVMERGESELTGADNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYYPSD 705 F+AWRNSA+LRVNT+PVRGD+FWLR+DDDLGD+R+ G+NLETTTK+ FGTLG+MY EI D+ GM++A RGADI+VPG NLKLFGEFVMERG+S+LTG DND NAWY+EGNYRF+ +PW P +++RYSHFSGDE +T +NEEYRG FFTIFKRDWDTWYQGEVTGE HLFNQNQ T++ K+K++PR D ++G WYY H LDTPQYFG PVSDT+W++E+N GVE++PSD Sbjct: 166 FSAWRNSAILRVNTEPVRGDIFWLRSDDDLGDARIAGINLETTTKDIFGTLGLMYLEIFDDNDALALSGMRVAGVRGADIRVPGFDNLKLFGEFVMERGKSDLTGRDNDANAWYVEGNYRFSTVPWNPILYFRYSHFSGDEGDTLENEEYRGSFFTIFKRDWDTWYQGEVTGEFHLFNQNQETKLVKLKIFPRPDWSVGVWYYNHNLDTPQYFGTPVSDTNWSEEVNFGVEHFPSD 401
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: A0A1Z9T670_9PROT (Uncharacterized protein (Fragment) n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1Z9T670_9PROT) HSP 1 Score: 359 bits (921), Expect = 1.450e-122 Identity = 162/234 (69.23%), Postives = 192/234 (82.05%), Query Frame = 1 Query: 1 FTAWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEKRFGWEGMKIASFRGADIKVPGIANLKLFGEFVMERGESELTGADNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYYPS 702 FTAWRNSA++R++T P+R D FWLRTDDDLGD+RVVGVN+ET E GTLG+MY EII + F +GM++AS RGADI+VP + +LKLFGE+V+ERG S+ TG N+GN WYIEGNY F++ PW PT YRY+HFSGDE+ T NEEYRGLFFTIFKRDWDTWYQGEV GE HLFNQNQVTQMAK+KVYP + +LG WYY+H LDT QYFG VSD DWA+E+NLG EY+PS Sbjct: 34 FTAWRNSAIIRIDTSPLRFDGFWLRTDDDLGDARVVGVNVETAENE-LGTLGLMYFEIIQDDNFALDGMRVASIRGADIRVPFLQDLKLFGEYVIERGRSKETGFKNNGNGWYIEGNYAFSSWPWKPTFIYRYAHFSGDESTTNQNEEYRGLFFTIFKRDWDTWYQGEVAGEFHLFNQNQVTQMAKMKVYPGQNWSLGIWYYSHNLDTKQYFGKVVSDLDWAEEVNLGFEYFPS 266
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: A0A523P529_9PROT (Uncharacterized protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P529_9PROT) HSP 1 Score: 251 bits (641), Expect = 3.260e-78 Identity = 112/233 (48.07%), Postives = 158/233 (67.81%), Query Frame = 1 Query: 1 FTAWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEKRFGWEGMKIASFRGADIKVPGIANLKLFGEFVMERGESEL-TGADNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYY 696 F AW+N+A+L+V+ + + D+FWLR+D GD+R+ GVNLE T T G G+MY I D ++G++ + R D+ VP + LKL+GE V++ GE + GADN G WY+E Y +PWT + YRY+HFSGD +T +NE YR LF+ + R+WDT+YQGE+ GE HLFN NQ+TQ K++ +P + +AL +Y+ H+L+ YFG PVS +DWADEINLGVEY+ Sbjct: 181 FDAWKNAAILKVSGERIHTDLFWLRSDGGFGDARLFGVNLENTNT-TLGRYGVMYINIYDGDALSYDGVQAWNVRALDVPVPRMPPLKLYGEVVIQVGEDDDGVGADNAGLGWYLEAAYTLPRLPWTTILTYRYAHFSGDNLDTRNNETYRSLFYGFYAREWDTFYQGEIAGEYHLFNSNQITQFLKLRTFPTAQIALTAYYFQHDLEERHYFGTPVSSSDWADEINLGVEYF 412
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: A0A3D5DD63_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DD63_9GAMM) HSP 1 Score: 239 bits (609), Expect = 1.490e-73 Identity = 112/233 (48.07%), Postives = 148/233 (63.52%), Query Frame = 1 Query: 1 FTAWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEKRFGWEGMKIASFRGADIKVPGIANLKLFGEFVMERGESELTGA-DNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYY 696 F AW+N+AVL+V+ K V D+FWL GDSR+ GVNLE FG G MY +I ++G++ + R D+ VP + LKLF E V++ GE + G DN G WYIE Y IPWT + YRYS FSG+E +T NEEYR L++ + R+WDT+YQGE+ GE HLFN NQ+TQ K + +P AL F+Y+ H+L+ YFG PV+ +DWADEIN GVEY+ Sbjct: 167 FDAWKNAAVLKVSGKHVHTDLFWLTAAGAFGDSRLYGVNLENVQTH-FGRFGAMYIDIYGGNELNFDGIEAWNLRALDVAVPYVPQLKLFAEVVLQLGEDKDGGGQDNKGLGWYIETAYTLDDIPWTTILTYRYSRFSGNELDTLSNEEYRSLYYGFYAREWDTFYQGEIAGEYHLFNSNQITQFLKFRTFPTEQYALTFYYFQHDLEERNYFGTPVTSSDWADEINAGVEYF 398
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: A0A1Z8WX84_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WX84_9GAMM) HSP 1 Score: 216 bits (549), Expect = 1.220e-64 Identity = 106/232 (45.69%), Postives = 143/232 (61.64%), Query Frame = 1 Query: 1 FTAWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEKRFGWEGMKIASFRGADIKVPGIANLKLFGEFVMERG-ESELTGADNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALG-FWYYTHELDTPQYFGAPVSDTDWADEINLGVE 690 F+AWRNS VLR+N + FWLRTD+D D R+VGVN E + +G LG +++ F G++ SFR AD + I LK FGE+V+++G + + G N WYIE Y + P + YRYS+ SGD+ T NE YRGL++TIFKR WDTWYQGE+ GE HLFN NQ+TQM K+K+ P S + +YY HEL+ YFG V+ W+ E+N+G+E Sbjct: 163 FSAWRNSLVLRLNLNQFLTEFFWLRTDNDFRDGRIVGVNFEYLD-DIYGELGFSTVHVLEGDAFNLRGLQAWSFRIADFRPVQINGLKFFGEWVLQKGVDDQGGGRKNQAFGWYIENEYEILFGSYKPIINYRYSNLSGDDLGTEKNEGYRGLYYTIFKRGWDTWYQGEIAGEYHLFNSNQITQMFKLKL-PLSKTSFAVIYYYDHELNEKHYFGQRVNSKKWSSELNVGIE 392
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: Q3A616_SYNC1 (Alginate_exp domain-containing protein n=1 Tax=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) TaxID=338963 RepID=Q3A616_SYNC1) HSP 1 Score: 180 bits (457), Expect = 1.080e-50 Identity = 100/246 (40.65%), Postives = 140/246 (56.91%), Query Frame = 1 Query: 7 AWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEKRF-----------GWEGMKIAS--FRGADIKVPGIANLKLFGEFVMERGESELTGADNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYYPSD 705 ++R +A+L+VNT+PVR D F+L+ D D D+ + GVN+E KE FGTLG + + D F +GM I S F+G + G+ L L GE+ E G AD D +Y+E + F+ +PWTPT+ YRY+ FSGDE +T D E + +F+ F R W T + GEV GE HLFN NQ QM + + P L++G YY +LD FG PV+ ++ADEINL +Y +D Sbjct: 185 SFRETAILKVNTEPVRADFFYLKADKDYADTEMYGVNVEYI-KEGFGTLGASWMTVTDANEFYEDGVTENFYANRDGMDIWSVRFQGNPLTAWGLEELFLAGEYADESGGDR---ADVDAYGYYLEAGWTFSNLPWTPTLSYRYAFFSGDETDTDDYEAFDPMFYG-FLRGWGTHFMGEVVGEYHLFNSNQQIQMVHLNLVPTDKLSVGAIYYNFKLDQNNIFGTPVTSDEYADEINLYADYALND 425
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: A0A1L3GH86_SYNAC (Alginate_exp domain-containing protein n=1 Tax=Syntrophotalea acetylenica TaxID=29542 RepID=A0A1L3GH86_SYNAC) HSP 1 Score: 179 bits (454), Expect = 2.980e-50 Identity = 99/246 (40.24%), Postives = 140/246 (56.91%), Query Frame = 1 Query: 7 AWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEKRF-----------GWEGMKIAS--FRGADIKVPGIANLKLFGEFVMERGESELTGADNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYYPSD 705 ++R +A+L+VNT+PVR D F+L+ D D D+ + GVN+E K+ FGTLG + I D F +GM + S F+G + G+ L L GE+ + G AD D +Y+E + F +PWTPT+ YRY+ FSGD+A+T D E + LF+ F R W T + GEV GE HLFN NQ QM + + P L++G YY +LD FG PV+ ++ADEINL +Y +D Sbjct: 185 SFRETAILKVNTEPVRADFFYLKADKDYADTELYGVNVEYI-KDGFGTLGASWMTITDANAFYEDGVTENFYANRDGMDVWSVRFQGNPLTAWGLEELFLSGEYADQAGGDR---ADVDAYGYYVEAGWTFGNLPWTPTLSYRYAFFSGDDADTSDYESFDPLFYG-FLRGWGTHFMGEVVGEYHLFNSNQQIQMVHLNLVPTDKLSVGAIYYNFKLDKNNIFGTPVTSDEYADEINLYADYALND 425
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: A0A7C6W3V9_9GAMM (Alginate_exp domain-containing protein n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6W3V9_9GAMM) HSP 1 Score: 175 bits (443), Expect = 1.570e-48 Identity = 90/239 (37.66%), Postives = 132/239 (55.23%), Query Frame = 1 Query: 7 AWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEKRFG----WEGMKIASFRGADIKVPGIANLKLFGEFVMERGESELTGADN--DGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYYPSD 705 A++ + ++R+N +PVRGD+F+L+ D D D+ + GVN+E K+ FGT G+ Y ++D R +GM + S +++ P + NL +G +V E G G D D +AWY+E Y FA PW+P + YRY+ FSG + ++ LF+ R W TW QGE+TG LFN NQ M + P L LG YY LD Y+G PVSD + DE+NL ++ +D Sbjct: 204 AFKRAGLVRINAQPVRGDLFYLKADSDQDDTELGGVNVEYVAKD-FGTFGVTYLHVLDSARPSNAGVRDGMNVLSLSVSELTPPAVPNLSFWGGYVAETGN----GRDGKIDADAWYLEARYTFADWPWSPALSYRYAAFSGAGVDDAKRRDFDPLFYGASDRGWGTWVQGEITGNYLLFNSNQRDHMVHLTASPGERLNLGLLYYRFFLDKNNYYGTPVSDDHFNDEVNLYADWTIND 437
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: UPI000360BEE1 (alginate export family protein n=1 Tax=Geopsychrobacter electrodiphilus TaxID=225196 RepID=UPI000360BEE1) HSP 1 Score: 169 bits (428), Expect = 1.410e-46 Identity = 92/238 (38.66%), Postives = 134/238 (56.30%), Query Frame = 1 Query: 16 NSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEIIDEKRFGW------EGMKIASFRGADIKVP--GIANLKLFGEFVMERGESELTGADNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYYPSD 705 N+A++R+NTKPVR D+F+L++D D D+ + G+N+E +T GT+G + + D G +GM + S RG GI +L L E+V E G + + D WY E Y +A+PW+PT+ Y+Y+ FSGD+A T D+E + LF+ F R W T + GE+ GE LFN NQ TQM K+ + P L++G YY LD FG D+A E+NL +Y +D Sbjct: 182 NTAIVRINTKPVRADLFYLKSDADYNDTELYGINVEHIN-DTLGTIGATWMTVTDSNEDGLGYYENRKGMDVYSIRGQGTPFASMGIEDLFLASEYVKEIGGDRV---EKDATGWYAEAGYTVSALPWSPTLSYKYAFFSGDKAGTSDDESFDPLFYG-FSRGWGTHFMGEIVGEYQLFNSNQKTQMLKLNLQPTESLSVGGIYYDFNLDQAAGFG-----NDFATEVNLYADYAVND 409
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Match: UPI0019DF5D73 (hypothetical protein n=1 Tax=Roseovarius sp. SHN287 TaxID=2824121 RepID=UPI0019DF5D73) HSP 1 Score: 164 bits (415), Expect = 1.100e-44 Identity = 92/236 (38.98%), Postives = 135/236 (57.20%), Query Frame = 1 Query: 4 TAWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTLGIMYAEI--IDEKRFGWEGMKIASFRGADIKVPGIANLKLFGEFVMERGESELTGADNDGNAWYIEGNYRFAAIPWTPTVFYRYSHFSGDEANTPDNEEYRGLFFTIFKRDWDTWYQGEVTGEMHLFNQNQVTQMAKIKVYPRSDLALGFWYYTHELDTPQYFGAPVSDTDWADEINLGVEYYPSD 705 TA+RN+ ++R+ + V F+++ D D + V GV+LE TT +G GI+YAEI DE F GM++ S R D+ +P + L L GE+ + G G D D + +Y + +Y FA +P+TPT+ YRYS FSG + + D + + LF+ W TW+QGE+ GE LFN NQ T M + + +G YY +LD YFG PV+ TD+ADEIN V++ +D Sbjct: 178 TAFRNTGIVRLGNEQVGFTGFYVKGDSDNDRAEVGGVDLEFTTD--YGQFGILYAEINDSDEVNFARRGMEMVSLRALDVPIPAVEGLSLSGEYTKQFGGKG--GNDFDAHGYYGQISYSFAGLPFTPTLSYRYSKFSGQDGSA-DIKAFDPLFYGF--DGWGTWFQGEIVGEYLLFNSNQRTHMVHLSGSVSESIGIGAIYYHFDLDKKNYFGIPVTSTDFADEINFYVDWEVND 406 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97313.22411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97313.22411.1 >prot_M-pyrifera_M_contig97313.22411.1 ID=prot_M-pyrifera_M_contig97313.22411.1|Name=mRNA_M-pyrifera_M_contig97313.22411.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp FTAWRNSAVLRVNTKPVRGDVFWLRTDDDLGDSRVVGVNLETTTKETFGTback to top mRNA from alignment at M-pyrifera_M_contig97313:6..710- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97313.22411.1 ID=mRNA_M-pyrifera_M_contig97313.22411.1|Name=mRNA_M-pyrifera_M_contig97313.22411.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=705bp|location=Sequence derived from alignment at M-pyrifera_M_contig97313:6..710- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97313:6..710- >mRNA_M-pyrifera_M_contig97313.22411.1 ID=mRNA_M-pyrifera_M_contig97313.22411.1|Name=mRNA_M-pyrifera_M_contig97313.22411.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1410bp|location=Sequence derived from alignment at M-pyrifera_M_contig97313:6..710- (Macrocystis pyrifera P11B4 male)back to top |