mRNA_M-pyrifera_M_contig97301.22407.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97301.22407.1
Unique NamemRNA_M-pyrifera_M_contig97301.22407.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: A0A090AGC6_9GAMM (Energy-dependent translational throttle protein EttA n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AGC6_9GAMM)

HSP 1 Score: 353 bits (905), Expect = 1.230e-116
Identity = 172/236 (72.88%), Postives = 200/236 (84.75%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            VIAVTH RYFLDNVAGWILELDRGRGIP+EGNYSSWLEQKE RLE+EEK ETAR R MK ELEWVRSN KGR +KSKARLARF++L+  + ++R  TQEIYIPPGPRLGD V+E  N++KGF D  LI +F F+LP+GGIVGVIGPNGAGKTTLFRM+  Q+ PD+G+I +G TV++AYVDQSR+ LEG+KTVWE +S GLDNI+V +YE+ SRAY  RFNFKG DQQK VK LSG
Sbjct:  214 VIAVTHDRYFLDNVAGWILELDRGRGIPWEGNYSSWLEQKEQRLEVEEKQETARQRTMKAELEWVRSNPKGRHAKSKARLARFEELANQDIEKRNATQEIYIPPGPRLGDLVVEAVNISKGFDDHLLIENFNFNLPRGGIVGVIGPNGAGKTTLFRMMVGQEQPDNGEIRIGPTVQLAYVDQSRDSLEGEKTVWEVISGGLDNIVVGKYEIPSRAYVGRFNFKGPDQQKRVKELSG 449
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BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: A7BWA7_9GAMM (Energy-dependent translational throttle protein EttA n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7BWA7_9GAMM)

HSP 1 Score: 352 bits (904), Expect = 1.740e-116
Identity = 168/236 (71.19%), Postives = 204/236 (86.44%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            VIAVTH RYFLDNVAGWILELDRG+GIP+EGNYSSWLEQK  RL IEEK E+AR R++K ELEWVRSN KGR +KSKARLARF++L++ + ++R +TQEIYIPPGPRLGD V+E  NL KGFGD  L+ +  F+LPKGGIVG+IGPNGAGKTTLFRM+ +Q+ PD+G++ +G TV++AYVDQSR+ L+GDKT WE +SDGLDNI+V +YE+SSRAY  RFNFKG+DQQK VK+LSG
Sbjct:  214 VIAVTHDRYFLDNVAGWILELDRGQGIPWEGNYSSWLEQKNKRLAIEEKQESARQRSIKAELEWVRSNPKGRHTKSKARLARFEELTQQDIEKRNDTQEIYIPPGPRLGDLVVEAVNLRKGFGDNLLVENLNFNLPKGGIVGIIGPNGAGKTTLFRMMVDQEKPDAGELRVGPTVELAYVDQSRDALDGDKTAWEIISDGLDNIVVGKYEISSRAYVGRFNFKGADQQKFVKDLSG 449
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BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: A0A370DIS8_9GAMM (Energy-dependent translational throttle protein EttA n=7 Tax=Bacteria TaxID=2 RepID=A0A370DIS8_9GAMM)

HSP 1 Score: 352 bits (903), Expect = 2.320e-116
Identity = 171/236 (72.46%), Postives = 202/236 (85.59%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            V+AVTH RYFLDNVAGWILELDRG GIP+EGNYSSWLEQKE RLE+E+K E A+++AMKQELEWVRSN KGR +KSKARL RFD+L   +FQ+R ET EIYIPPGPRLGD VIE E+L K +GDRTL +D  F+LPKGGIVG+IGPNGAGKTTLFRMLT Q+TPD G++ +GD+V+I++VDQSR+ L+ DKTVWE +SDG D I VD+YE  SRAY +RFNFKGSDQQK + +LSG
Sbjct:  212 VVAVTHDRYFLDNVAGWILELDRGHGIPWEGNYSSWLEQKEQRLELEQKQEAAKVKAMKQELEWVRSNPKGRHAKSKARLQRFDELQSQDFQQRNETNEIYIPPGPRLGDLVIEAESLKKSYGDRTLYDDLNFNLPKGGIVGIIGPNGAGKTTLFRMLTGQETPDGGELRIGDSVEISHVDQSRDALDDDKTVWEEISDGQDIITVDRYETQSRAYVSRFNFKGSDQQKRIGDLSG 447
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BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: A0A3C0I1L0_9GAMM (Energy-dependent translational throttle protein EttA n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0I1L0_9GAMM)

HSP 1 Score: 352 bits (903), Expect = 2.390e-116
Identity = 171/236 (72.46%), Postives = 200/236 (84.75%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            VIA+TH RYFLDNVAGWILELDRG GIP+EGNYSSWLEQKE RLE+EEK E+AR R+MK ELEWVRSN KGR +KSKARLARF++LS  +  +R  TQEIYIPPGPRLGD V+E  NL K FGD+ LI++  F+LPKGGIVG+IGPNGAGKTTLFRM+  Q+ PD+G++ +G TV++AYVDQSR+ LEGDKTVWE +SDG DNIIV +YE+ SRAYC RFN KG DQQK VK+LSG
Sbjct:  214 VIAITHDRYFLDNVAGWILELDRGHGIPWEGNYSSWLEQKEKRLELEEKQESARQRSMKAELEWVRSNPKGRHAKSKARLARFEELSNQDIDKRNATQEIYIPPGPRLGDLVVESINLRKSFGDQLLIDNLNFNLPKGGIVGIIGPNGAGKTTLFRMIVGQEQPDNGELRIGPTVELAYVDQSRDSLEGDKTVWEVISDGQDNIIVGKYEIPSRAYCGRFNLKGGDQQKRVKDLSG 449
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BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: A0A431HKX2_9GAMM (Energy-dependent translational throttle protein EttA n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A431HKX2_9GAMM)

HSP 1 Score: 351 bits (901), Expect = 4.510e-116
Identity = 169/236 (71.61%), Postives = 200/236 (84.75%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            V+AVTH RYFLDNVAGWILELDRG GIP+EGNYSSWLEQKE RLE EEK E AR++AMKQELEWVRSN KGR +KSKARLARF++L   EFQ+R ETQE+YIPPGPRLG+ V+E ENL KGFG+R LI+   F LP+GGIVGVIGPNGAGK+TLFRM+  Q+TPDSG + +GDTV++AYVDQSR+ L G  TVW+ +SDG D I +  Y+++SRAYC RFNFKG+DQQK +K+LSG
Sbjct:  212 VVAVTHDRYFLDNVAGWILELDRGHGIPWEGNYSSWLEQKEQRLEREEKQENARIKAMKQELEWVRSNPKGRHAKSKARLARFEELESQEFQKRNETQELYIPPGPRLGELVVEAENLKKGFGERLLIDGLNFRLPRGGIVGVIGPNGAGKSTLFRMICAQETPDSGSLRVGDTVQLAYVDQSRDALTGSNTVWQEISDGQDLIQIGSYQINSRAYCGRFNFKGTDQQKFIKDLSG 447
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BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: UPI0003B531B3 (energy-dependent translational throttle protein EttA n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI0003B531B3)

HSP 1 Score: 351 bits (901), Expect = 4.510e-116
Identity = 174/236 (73.73%), Postives = 200/236 (84.75%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            V+AVTH RYFLDNVAGWILELDRG GIP++GNYSSWLEQKE RLE EEK E+ARMRAMK ELEWVRSN KGR +KSKARLARF++LS  EFQ+R ET+EIYIPPGPRLGD V+E E+L KG+GDR LI+D +F+LP GGIVGVIGPNG GKTTLFRM+  ++TPD+G I +GDTVK+AYVDQSRE L+ DKTVWE +SDGLD I V  Y+  SRAY  RFN KGSDQQK + +LSG
Sbjct:  212 VVAVTHDRYFLDNVAGWILELDRGHGIPWQGNYSSWLEQKERRLETEEKQESARMRAMKAELEWVRSNPKGRHAKSKARLARFEELSSQEFQKRNETREIYIPPGPRLGDVVVEAEHLRKGYGDRLLIDDLSFNLPPGGIVGVIGPNGVGKTTLFRMIAGEETPDAGTIRIGDTVKLAYVDQSREALDPDKTVWEEISDGLDLIEVGTYKTPSRAYVGRFNIKGSDQQKRIGDLSG 447
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BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: W6M886_9GAMM (Energy-dependent translational throttle protein EttA n=9 Tax=Gammaproteobacteria TaxID=1236 RepID=W6M886_9GAMM)

HSP 1 Score: 350 bits (899), Expect = 9.020e-116
Identity = 172/236 (72.88%), Postives = 197/236 (83.47%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            V+AVTH RYFLDNVAGWILELDRGRGIP+EGNYSSWLEQKE RLEIEEK ETA ++AMK ELEWVR+N KGR +KSKAR+ARF++L   EFQ+R ETQE+YIPPGPRLGD V+E   L KGFGDR LI+   F LPKGGIVGVIGPNGAGKTTLFRML  Q+ PD G + +GDTVK+AYVDQSR+ L  DKTVW+ +SDGLD I +  Y+++SRAY  RFNFKG DQQK VK+LSG
Sbjct:  212 VVAVTHDRYFLDNVAGWILELDRGRGIPWEGNYSSWLEQKEQRLEIEEKQETAHIKAMKAELEWVRANPKGRHAKSKARVARFEELESQEFQKRNETQELYIPPGPRLGDLVVEATGLRKGFGDRLLIDGLDFKLPKGGIVGVIGPNGAGKTTLFRMLVGQEQPDGGTLRVGDTVKLAYVDQSRDALAPDKTVWQEISDGLDVIAIGSYQINSRAYVGRFNFKGPDQQKFVKDLSG 447
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BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: UPI0018DB1161 (energy-dependent translational throttle protein EttA n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI0018DB1161)

HSP 1 Score: 350 bits (898), Expect = 1.280e-115
Identity = 172/236 (72.88%), Postives = 200/236 (84.75%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            V+AVTH RYFLDNVAGWILELDRG GIP+EGNYSSWLEQKE RLE+EEK E +R++AMK ELEWVRSN KGR +KSKARLARF++LS  E Q+R ETQEIYIPPGPRLGDKVI+VE+L KGFGDR LI+D +F LP GGIVG+IGPNGAGKTTLFRM+  ++ PD+GKI  G TV++AYVDQ+R+ L+ +KTVWE +SDGLD I V  Y   SRAY +RFNFKGSDQQK + NLSG
Sbjct:  212 VVAVTHDRYFLDNVAGWILELDRGMGIPWEGNYSSWLEQKEKRLELEEKQENSRIKAMKAELEWVRSNPKGRHAKSKARLARFEELSSQEAQKRNETQEIYIPPGPRLGDKVIDVEHLKKGFGDRLLIDDLSFKLPPGGIVGIIGPNGAGKTTLFRMMAGEEQPDAGKIEFGPTVQLAYVDQNRDDLDPNKTVWEEISDGLDTITVGNYTTPSRAYVSRFNFKGSDQQKRIGNLSG 447
[Close]
BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: A0A7C5NJP3_9GAMM (Energy-dependent translational throttle protein EttA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5NJP3_9GAMM)

HSP 1 Score: 350 bits (897), Expect = 1.810e-115
Identity = 172/236 (72.88%), Postives = 198/236 (83.90%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            V+A+TH RYFLDNVAGWILELDRG GIP+EGNYSSWLEQKE RLE+EE+ E+AR RAMK ELEWVRSN KGR +KSKARLARF++L++ E QRR ETQEIYIPPGPRLGD VIE   L KGFGDR LI+   FSLP+GGIVG+IGPNGAGKTTLFRM+T Q+ PD G+I +G+TVKIAYVDQSR+ L+  KTVWE +SDG D I V  Y+ +SR+YCARFNFKG DQQK +  LSG
Sbjct:  212 VVAITHDRYFLDNVAGWILELDRGHGIPWEGNYSSWLEQKEKRLELEERQESARQRAMKAELEWVRSNPKGRHAKSKARLARFEELARQEVQRRNETQEIYIPPGPRLGDLVIEARGLRKGFGDRLLIDGLDFSLPRGGIVGIIGPNGAGKTTLFRMITGQEQPDGGEIRIGETVKIAYVDQSRDALDDGKTVWEEISDGQDIISVGNYQTASRSYCARFNFKGPDQQKRIGELSG 447
[Close]
BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Match: A0A1D8IPN7_9GAMM (Energy-dependent translational throttle protein EttA n=4 Tax=Acidihalobacter TaxID=1765964 RepID=A0A1D8IPN7_9GAMM)

HSP 1 Score: 350 bits (897), Expect = 1.860e-115
Identity = 175/236 (74.15%), Postives = 202/236 (85.59%), Query Frame = 1 
Query:    1 VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKHETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEIYIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAGKTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDGLDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG 708
            V+AVTH RYFLDNVAGWILELDRG GIP+EGNYSSWLEQKE RL  EEK E AR++AM+ ELEWVR+N KGRQ+KSKARL RF++LS  ++Q+R ET+EIYIPPGPRLGDKVIEVENL+K FGDR L    +FSLP+GGIVGVIGPNGAGKTTLFRMLT  + PD+G I++G+TV+IAYVDQSR+ L GDKTVWE LSDG D I V  YEV+SRAY +RFNF+G DQQK VK+LSG
Sbjct:  212 VVAVTHDRYFLDNVAGWILELDRGHGIPWEGNYSSWLEQKERRLAQEEKSEGARVKAMEAELEWVRANPKGRQAKSKARLKRFEELSSSDYQKRSETKEIYIPPGPRLGDKVIEVENLSKSFGDRVLYQGLSFSLPRGGIVGVIGPNGAGKTTLFRMLTGAEQPDAGTISVGETVQIAYVDQSRDALGGDKTVWEELSDGQDIITVGNYEVNSRAYASRFNFRGPDQQKRVKDLSG 447
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97301.22407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A090AGC6_9GAMM1.230e-11672.88Energy-dependent translational throttle protein Et... [more]
A7BWA7_9GAMM1.740e-11671.19Energy-dependent translational throttle protein Et... [more]
A0A370DIS8_9GAMM2.320e-11672.46Energy-dependent translational throttle protein Et... [more]
A0A3C0I1L0_9GAMM2.390e-11672.46Energy-dependent translational throttle protein Et... [more]
A0A431HKX2_9GAMM4.510e-11671.61Energy-dependent translational throttle protein Et... [more]
UPI0003B531B34.510e-11673.73energy-dependent translational throttle protein Et... [more]
W6M886_9GAMM9.020e-11672.88Energy-dependent translational throttle protein Et... [more]
UPI0018DB11611.280e-11572.88energy-dependent translational throttle protein Et... [more]
A0A7C5NJP3_9GAMM1.810e-11572.88Energy-dependent translational throttle protein Et... [more]
A0A1D8IPN7_9GAMM1.860e-11574.15Energy-dependent translational throttle protein Et... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97301contigM-pyrifera_M_contig97301:2..709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score352.4
Seed ortholog evalue1.6e-94
Seed eggNOG ortholog1283300.ATXB01000001_gene1534
Preferred nameyjjK
KEGG koko:K06020
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113
EggNOG free text desc.TIGRFAM ATP-binding cassette protein, ChvD family
EggNOG OGs1MU37@1224,1RPWS@1236,1XE4C@135618,COG0488@1,COG0488@2
EC3.6.3.25
COG Functional cat.S
Best tax levelMethylococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size708
Cds size708
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816889.5702717-CDS-M-pyrifera_M_contig97301:1..7091622816889.5702717-CDS-M-pyrifera_M_contig97301:1..709Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97301 2..709 -
1692278238.5306623-CDS-M-pyrifera_M_contig97301:1..7091692278238.5306623-CDS-M-pyrifera_M_contig97301:1..709Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97301 2..709 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97301.22407.1prot_M-pyrifera_M_contig97301.22407.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97301 2..709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97301.22407.1

>prot_M-pyrifera_M_contig97301.22407.1 ID=prot_M-pyrifera_M_contig97301.22407.1|Name=mRNA_M-pyrifera_M_contig97301.22407.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
VIAVTHYRYFLDNVAGWILELDRGRGIPYEGNYSSWLEQKENRLEIEEKH
ETARMRAMKQELEWVRSNSKGRQSKSKARLARFDDLSKMEFQRRCETQEI
YIPPGPRLGDKVIEVENLNKGFGDRTLINDFTFSLPKGGIVGVIGPNGAG
KTTLFRMLTEQDTPDSGKITLGDTVKIAYVDQSREHLEGDKTVWETLSDG
LDNIIVDQYEVSSRAYCARFNFKGSDQQKLVKNLSG
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mRNA from alignment at M-pyrifera_M_contig97301:2..709-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97301.22407.1 ID=mRNA_M-pyrifera_M_contig97301.22407.1|Name=mRNA_M-pyrifera_M_contig97301.22407.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig97301:2..709- (Macrocystis pyrifera P11B4 male)
GTAATTGCAGTCACCCATTATCGCTACTTCTTAGATAATGTCGCCGGTTG
GATTTTAGAATTAGACCGTGGACGTGGTATTCCTTATGAAGGCAACTATT
CCTCTTGGTTAGAACAGAAAGAAAATCGCCTTGAAATTGAAGAAAAACAC
GAAACTGCTCGCATGCGTGCGATGAAGCAAGAGTTAGAATGGGTTCGTTC
CAACTCAAAAGGTCGTCAATCTAAAAGTAAAGCGCGCTTGGCTCGCTTTG
ATGATCTATCAAAAATGGAATTCCAACGCCGTTGCGAAACCCAAGAAATA
TACATTCCACCAGGACCAAGGTTGGGGGACAAAGTTATTGAAGTGGAAAA
TCTCAATAAAGGCTTTGGCGATCGCACCTTAATTAATGACTTTACGTTTA
GTTTACCCAAAGGTGGTATTGTCGGCGTTATCGGACCTAATGGTGCAGGT
AAAACCACACTGTTCCGCATGTTAACCGAACAAGACACACCTGACAGCGG
CAAAATCACACTTGGTGATACCGTTAAAATTGCTTATGTCGACCAGTCAC
GGGAACATTTAGAGGGCGATAAAACCGTCTGGGAAACATTGTCTGATGGT
TTAGATAACATTATTGTCGATCAATATGAAGTTTCTTCACGGGCCTATTG
TGCGCGTTTCAATTTCAAAGGATCTGATCAACAAAAATTAGTGAAAAACC
TATCCGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97301:2..709-

>mRNA_M-pyrifera_M_contig97301.22407.1 ID=mRNA_M-pyrifera_M_contig97301.22407.1|Name=mRNA_M-pyrifera_M_contig97301.22407.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig97301:2..709- (Macrocystis pyrifera P11B4 male)
GTAATTGCAGTCACCCATTATCGCTACTTCTTAGATAATGTCGCCGGTTG
GATTTTAGAATTAGACCGTGGACGTGGTATTCCTTATGAAGGCAACTATT
CCTCTTGGTTAGAACAGAAAGAAAATCGCCTTGAAATTGAAGAAAAACAC
GAAACTGCTCGCATGCGTGCGATGAAGCAAGAGTTAGAATGGGTTCGTTC
CAACTCAAAAGGTCGTCAATCTAAAAGTAAAGCGCGCTTGGCTCGCTTTG
ATGATCTATCAAAAATGGAATTCCAACGCCGTTGCGAAACCCAAGAAATA
TACATTCCACCAGGACCAAGGTTGGGGGACAAAGTTATTGAAGTGGAAAA
TCTCAATAAAGGCTTTGGCGATCGCACCTTAATTAATGACTTTACGTTTA
GTTTACCCAAAGGTGGTATTGTCGGCGTTATCGGACCTAATGGTGCAGGT
AAAACCACACTGTTCCGCATGTTAACCGAACAAGACACACCTGACAGCGG
CAAAATCACACTTGGTGATACCGTTAAAATTGCTTATGTCGACCAGTCAC
GGGAACATTTAGAGGGCGATAAAACCGTCTGGGAAACATTGTCTGATGGT
TTAGATAACATTATTGTCGATCAATATGAAGTTTCTTCACGGGCCTATTG
TGCGCGTTTCAATTTCAAAGGATCTGATCAACAAAAATTAGTGAAAAACC
TATCCGGTGTAATTGCAGTCACCCATTATCGCTACTTCTTAGATAATGTC
GCCGGTTGGATTTTAGAATTAGACCGTGGACGTGGTATTCCTTATGAAGG
CAACTATTCCTCTTGGTTAGAACAGAAAGAAAATCGCCTTGAAATTGAAG
AAAAACACGAAACTGCTCGCATGCGTGCGATGAAGCAAGAGTTAGAATGG
GTTCGTTCCAACTCAAAAGGTCGTCAATCTAAAAGTAAAGCGCGCTTGGC
TCGCTTTGATGATCTATCAAAAATGGAATTCCAACGCCGTTGCGAAACCC
AAGAAATATACATTCCACCAGGACCAAGGTTGGGGGACAAAGTTATTGAA
GTGGAAAATCTCAATAAAGGCTTTGGCGATCGCACCTTAATTAATGACTT
TACGTTTAGTTTACCCAAAGGTGGTATTGTCGGCGTTATCGGACCTAATG
GTGCAGGTAAAACCACACTGTTCCGCATGTTAACCGAACAAGACACACCT
GACAGCGGCAAAATCACACTTGGTGATACCGTTAAAATTGCTTATGTCGA
CCAGTCACGGGAACATTTAGAGGGCGATAAAACCGTCTGGGAAACATTGT
CTGATGGTTTAGATAACATTATTGTCGATCAATATGAAGTTTCTTCACGG
GCCTATTGTGCGCGTTTCAATTTCAAAGGATCTGATCAACAAAAATTAGT
GAAAAACCTATCCGGT
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