mRNA_M-pyrifera_M_contig97300.22406.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97300.22406.1
Unique NamemRNA_M-pyrifera_M_contig97300.22406.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: A0A3D1GCY3_9BACT (DEAD/DEAH box helicase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GCY3_9BACT)

HSP 1 Score: 426 bits (1094), Expect = 5.030e-145
Identity = 209/235 (88.94%), Postives = 227/235 (96.60%), Query Frame = 1 
Query:    4 TVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG 708
            TVAVYGGANIS+QIRAL+NGCQVV+GTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQD+LDAIL DTPKEKQTLLFSATMPK IAK+++KYMNNP EI VGERNSGAKNVEHH+YMVHAKDRF+ALKR VDMNPD+YGIIFCRTRRET EI+TKL+KDGYDVDLLNGDLSQ QRD+VMNRFRTK+LQ+LVATDVAARGLDV+ LTHVIN+NLPDDLEVY+HRSGRTGRAG
Sbjct:  103 TVAVYGGANISSQIRALDNGCQVVIGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDELDAILADTPKEKQTLLFSATMPKPIAKMAKKYMNNPDEIEVGERNSGAKNVEHHYYMVHAKDRFQALKRIVDMNPDVYGIIFCRTRRETSEIATKLNKDGYDVDLLNGDLSQAQRDDVMNRFRTKELQLLVATDVAARGLDVDSLTHVINYNLPDDLEVYIHRSGRTGRAG 337
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BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: A0A1B6YDM9_9BACT (DEAD/DEAH box helicase n=6 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A1B6YDM9_9BACT)

HSP 1 Score: 421 bits (1083), Expect = 4.600e-143
Identity = 205/234 (87.61%), Postives = 225/234 (96.15%), Query Frame = 1 
Query:    4 TVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRA 705
            TVAVYGGANISTQI+ALNNGCQVV+GTPGRMLDLI R+KLDVRNV+TLVLDEADEMLNMGFQDDLDAIL DTP+EKQTLLFSATMPK IAK+S KYMNNP+EI VGERN+GAKNVEHH+YMVHAK+RFEALKR VDMNPD+YGIIFCRTRRET EI+ KL+KDGYDVDLLNGDLSQ QRD+VMNRFRTK+L++LVATDVAARGLDVN+LTHVIN+NLPDDLEVY+HRSGRTGRA
Sbjct:  103 TVAVYGGANISTQIKALNNGCQVVIGTPGRMLDLINRKKLDVRNVRTLVLDEADEMLNMGFQDDLDAILADTPREKQTLLFSATMPKAIAKMSAKYMNNPEEIEVGERNAGAKNVEHHYYMVHAKNRFEALKRIVDMNPDVYGIIFCRTRRETSEIAAKLNKDGYDVDLLNGDLSQAQRDDVMNRFRTKELELLVATDVAARGLDVNELTHVINYNLPDDLEVYIHRSGRTGRA 336
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BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: UPI0003639894 (DEAD/DEAH box helicase n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI0003639894)

HSP 1 Score: 417 bits (1073), Expect = 1.130e-141
Identity = 203/231 (87.88%), Postives = 224/231 (96.97%), Query Frame = 1 
Query:    4 TVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRT 696
            TVAVYGGANISTQIRAL+NGCQVV+GTPGRMLDLI+R+KLDVRNV+TLVLDEADEMLNMGFQDDLDAIL DTPKEKQTLLFSATMPK IAK+++KYMNNP+EI VGERNSGAKNVEHH+YMVHAKDRFEALKR  DMNPDIYGI+FCRTRRET EI++KL+KDGY+VDLLNGDLSQ QRD+VMNRFRTK+LQ+LVATDVAARGLDVN+LTHVIN+NLPDDLEVY+HRSGRT
Sbjct:  103 TVAVYGGANISTQIRALDNGCQVVIGTPGRMLDLIRRKKLDVRNVRTLVLDEADEMLNMGFQDDLDAILADTPKEKQTLLFSATMPKAIAKMAKKYMNNPEEIEVGERNSGAKNVEHHYYMVHAKDRFEALKRVTDMNPDIYGIVFCRTRRETAEIASKLNKDGYNVDLLNGDLSQAQRDDVMNRFRTKELQLLVATDVAARGLDVNELTHVINYNLPDDLEVYIHRSGRT 333
[Close]
BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: A0A3M8FQI8_9BACT (DEAD/DEAH box helicase n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8FQI8_9BACT)

HSP 1 Score: 404 bits (1038), Expect = 9.980e-137
Identity = 200/236 (84.75%), Postives = 221/236 (93.64%), Query Frame = 1 
Query:    1 TTVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG 708
            TTVAVYGGANISTQI+AL NGCQVVVGTPGR LDLIKR +LDV  +KTLVLDEADEMLNMGFQ++LDAILE+TP  K+T LFSATMPK IAK+++KYM++P+EI VGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNP IYGIIFCRTR ET EIS+KL++DGYDVD LNGDLSQ QRD+VMNRFRTK+LQ+LVATDVAARGLDV++LTHVINFNLPDDLEVYVHRSGRTGRAG
Sbjct:  102 TTVAVYGGANISTQIKALKNGCQVVVGTPGRTLDLIKRNQLDVSEIKTLVLDEADEMLNMGFQEELDAILENTPSNKRTFLFSATMPKPIAKMAKKYMSDPEEIEVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPKIYGIIFCRTRYETAEISSKLTRDGYDVDFLNGDLSQAQRDDVMNRFRTKELQLLVATDVAARGLDVDNLTHVINFNLPDDLEVYVHRSGRTGRAG 337
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BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: A0A2D8CHC3_9BACT (DEAD/DEAH box helicase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CHC3_9BACT)

HSP 1 Score: 397 bits (1021), Expect = 1.410e-133
Identity = 193/235 (82.13%), Postives = 220/235 (93.62%), Query Frame = 1 
Query:    4 TVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG 708
            TVAVYGGANISTQIRALN G QVV+GTPGRMLDLI+RRKLDV NV++L+LDEADEMLNMGFQDDLDAIL DTPKEKQTLLFSATMPK I+K++ KYMNNP+EI V  RNSGA NVEHH+YMV+AKDR++ALKR  D+NPD+YGIIFCRTRRET E+++KLSK+GY+ DLLNGDLSQ QRDEVMNRFR+K+LQ+LVATDVAARGLDV++LTHVIN+NLPDDLEVY+HRSGRTGRAG
Sbjct:  103 TVAVYGGANISTQIRALNKGTQVVIGTPGRMLDLIRRRKLDVTNVRSLILDEADEMLNMGFQDDLDAILHDTPKEKQTLLFSATMPKQISKMAHKYMNNPEEIQVNARNSGALNVEHHYYMVNAKDRYDALKRIADVNPDVYGIIFCRTRRETSEVASKLSKEGYNADLLNGDLSQSQRDEVMNRFRSKELQLLVATDVAARGLDVDNLTHVINYNLPDDLEVYIHRSGRTGRAG 337
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BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: A0A521EB73_9BACT (ATP-dependent RNA helicase DeaD n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521EB73_9BACT)

HSP 1 Score: 395 bits (1015), Expect = 8.680e-133
Identity = 193/235 (82.13%), Postives = 219/235 (93.19%), Query Frame = 1 
Query:    4 TVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG 708
            TVAVYGGANISTQIRALNNG QVV+GTPGRMLDLI+R KLDV NV++LVLDEADEMLNMGFQ+DLDAIL DTPKEKQTLLFSATMP  I+K++ KYMNNP+EI V  RNSGA NVEHH+YMVHA+DR+EALKR  D+NPDIYGIIFCRTRRET E+++KLSK+GY+ DLLNGDLSQ QRDEVM+RFR+K+LQ+LVATDVAARGLDV++LTHVIN+NLPDDLEVY+HRSGRTGRAG
Sbjct:  103 TVAVYGGANISTQIRALNNGVQVVIGTPGRMLDLIRRGKLDVTNVRSLVLDEADEMLNMGFQEDLDAILHDTPKEKQTLLFSATMPNQISKMAHKYMNNPEEIQVNARNSGALNVEHHYYMVHARDRYEALKRIADVNPDIYGIIFCRTRRETSEVASKLSKEGYNADLLNGDLSQNQRDEVMDRFRSKELQLLVATDVAARGLDVDNLTHVINYNLPDDLEVYIHRSGRTGRAG 337
[Close]
BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: A0A6A8Q973_9BACT (DEAD/DEAH box helicase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q973_9BACT)

HSP 1 Score: 391 bits (1005), Expect = 2.020e-131
Identity = 190/235 (80.85%), Postives = 218/235 (92.77%), Query Frame = 1 
Query:    4 TVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG 708
            T+AVYGG NIS+QIRAL  GCQ+VVGTPGRMLDLI+RRKL+V NV++LVLDEADEMLNMGFQ+DLDAIL+DTPKEKQTLLFSATMP+ IA++S+KYMNNP EI VG RNS A+NVEHH+YMV AKDR+EA+KR  D+NPDIYGIIFCRTRRET  +++KLSKDGY+ DLLNGDLSQGQRDEVM RFR+K+LQ+LVATDVAARGLDV+ LTHVIN+NLPDDLEVY+HRSGRTGRAG
Sbjct:  102 TLAVYGGTNISSQIRALKKGCQIVVGTPGRMLDLIRRRKLNVTNVRSLVLDEADEMLNMGFQEDLDAILKDTPKEKQTLLFSATMPRQIARMSKKYMNNPNEIEVGARNSAAQNVEHHYYMVKAKDRYEAIKRIADVNPDIYGIIFCRTRRETATVASKLSKDGYNADLLNGDLSQGQRDEVMGRFRSKELQLLVATDVAARGLDVDSLTHVINYNLPDDLEVYIHRSGRTGRAG 336
[Close]
BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: UPI000CD8D2E5 (DEAD/DEAH box helicase n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD8D2E5)

HSP 1 Score: 387 bits (993), Expect = 1.990e-129
Identity = 190/236 (80.51%), Postives = 218/236 (92.37%), Query Frame = 1 
Query:    1 TTVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG 708
            +TVAVYGGANISTQIRAL  G QVV+GTPGRMLDLI+R KLDV NV++L+LDEADEMLNMGFQDDLDAIL DTPKEKQTLLFSATMPK I+K+++KYM++P+EI V  RNSGA NVEHHFYMV+AKDR++ALKR  D+NPDIYGIIFCRTRRET +I++KLSK+GY+ DLLNGDLSQ QRDEVMNRFR+ +LQ+LVATDVAARGLDV+ LTHVIN+NLPDDLEVY+HRSGRTGRAG
Sbjct:  102 STVAVYGGANISTQIRALKRGTQVVIGTPGRMLDLIRRGKLDVTNVRSLILDEADEMLNMGFQDDLDAILHDTPKEKQTLLFSATMPKQISKMARKYMHDPEEIQVNARNSGALNVEHHFYMVNAKDRYDALKRIADVNPDIYGIIFCRTRRETADIASKLSKEGYNADLLNGDLSQNQRDEVMNRFRSGELQLLVATDVAARGLDVDSLTHVINYNLPDDLEVYIHRSGRTGRAG 337
[Close]
BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: A0A2D9FY01_9BACT (DEAD/DEAH box helicase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FY01_9BACT)

HSP 1 Score: 385 bits (990), Expect = 1.180e-128
Identity = 189/235 (80.43%), Postives = 214/235 (91.06%), Query Frame = 1 
Query:    4 TVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG 708
            T+AVYGG NISTQIR L NG QVV+GTPGRMLDLI+RRKLDV NV++LVLDEADEMLNMGFQ+DLDAIL DTPKEKQTLLFSATMP  I+KI+ KYMNNP+EI V  RNSGA NVEHHFYMV AK+R++ALKR  D+NPDIYGIIFCRTRRET +I++KL+K+GY+ DLLNGDLSQ QRDEVMNRFR+ +LQ+LVATDVAARGLDV+ LTHVIN+NLPDDLEVY+HRSGRTGRAG
Sbjct:  103 TLAVYGGTNISTQIRGLKNGAQVVIGTPGRMLDLIRRRKLDVTNVRSLVLDEADEMLNMGFQEDLDAILRDTPKEKQTLLFSATMPNQISKIANKYMNNPEEIQVSARNSGALNVEHHFYMVQAKNRYDALKRIADVNPDIYGIIFCRTRRETADIASKLTKEGYNADLLNGDLSQSQRDEVMNRFRSGELQLLVATDVAARGLDVDSLTHVINYNLPDDLEVYIHRSGRTGRAG 337
[Close]
BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Match: UPI0003647A42 (DEAD/DEAH box helicase n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI0003647A42)

HSP 1 Score: 380 bits (976), Expect = 8.720e-127
Identity = 187/235 (79.57%), Postives = 211/235 (89.79%), Query Frame = 1 
Query:    4 TVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLVLDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNNPQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRTRRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDVAARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG 708
            T+AVYGG +I +QI AL  G QVV+GTPGRMLDLIKR KLDV NV++LVLDEADEMLNMGFQDDLDAIL DTPKEKQTLLFSATMP  I+KI++KYMNNP+EI V  RNSGA NVEHH+YMV A+DR++ALKR VD+NPDIYGIIFCRTRRET +I+  L+KDGYDVD LNGDLSQ QRD+VMNRFRT +LQ+LVATDVAARGLDV+ LTHVIN+NLPDDLEVY+HRSGRTGRAG
Sbjct:  103 TLAVYGGTSIGSQISALKRGVQVVIGTPGRMLDLIKRGKLDVTNVRSLVLDEADEMLNMGFQDDLDAILHDTPKEKQTLLFSATMPNQISKIARKYMNNPEEIQVSARNSGALNVEHHYYMVQARDRYDALKRVVDVNPDIYGIIFCRTRRETSDIAASLAKDGYDVDWLNGDLSQSQRDDVMNRFRTGELQLLVATDVAARGLDVDSLTHVINYNLPDDLEVYIHRSGRTGRAG 337
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97300.22406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D1GCY3_9BACT5.030e-14588.94DEAD/DEAH box helicase n=1 Tax=Balneolaceae bacter... [more]
A0A1B6YDM9_9BACT4.600e-14387.61DEAD/DEAH box helicase n=6 Tax=Bacteroidetes/Chlor... [more]
UPI00036398941.130e-14187.88DEAD/DEAH box helicase n=1 Tax=Balneola vulgaris T... [more]
A0A3M8FQI8_9BACT9.980e-13784.75DEAD/DEAH box helicase n=1 Tax=Balneola sp. TaxID=... [more]
A0A2D8CHC3_9BACT1.410e-13382.13DEAD/DEAH box helicase n=2 Tax=Balneolaceae TaxID=... [more]
A0A521EB73_9BACT8.680e-13382.13ATP-dependent RNA helicase DeaD n=1 Tax=Gracilimon... [more]
A0A6A8Q973_9BACT2.020e-13180.85DEAD/DEAH box helicase n=1 Tax=Balneolaceae bacter... [more]
UPI000CD8D2E51.990e-12980.51DEAD/DEAH box helicase n=1 Tax=Gracilimonas amylol... [more]
A0A2D9FY01_9BACT1.180e-12880.43DEAD/DEAH box helicase n=2 Tax=Balneolaceae TaxID=... [more]
UPI0003647A428.720e-12779.57DEAD/DEAH box helicase n=1 Tax=Gracilimonas tropic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97300contigM-pyrifera_M_contig97300:2..709 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score421.0
Seed ortholog evalue3.6e-115
Seed eggNOG ortholog1121104.AQXH01000002_gene627
Preferred namedeaD
KEGG koko:K05592
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.Belongs to the DEAD box helicase family
EggNOG OGs1IQEP@117747,4NEJV@976,COG0513@1,COG0513@2
EC3.6.4.13
COG Functional cat.L
Best tax levelSphingobacteriia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03019
Exons1
Model size708
Cds size708
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816889.5341253-CDS-M-pyrifera_M_contig97300:1..7091622816889.5341253-CDS-M-pyrifera_M_contig97300:1..709Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97300 2..709 +
1692278238.5165987-CDS-M-pyrifera_M_contig97300:1..7091692278238.5165987-CDS-M-pyrifera_M_contig97300:1..709Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97300 2..709 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97300.22406.1prot_M-pyrifera_M_contig97300.22406.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97300 2..709 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97300.22406.1

>prot_M-pyrifera_M_contig97300.22406.1 ID=prot_M-pyrifera_M_contig97300.22406.1|Name=mRNA_M-pyrifera_M_contig97300.22406.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
TTVAVYGGANISTQIRALNNGCQVVVGTPGRMLDLIKRRKLDVRNVKTLV
LDEADEMLNMGFQDDLDAILEDTPKEKQTLLFSATMPKGIAKISQKYMNN
PQEISVGERNSGAKNVEHHFYMVHAKDRFEALKRTVDMNPDIYGIIFCRT
RRETQEISTKLSKDGYDVDLLNGDLSQGQRDEVMNRFRTKDLQILVATDV
AARGLDVNDLTHVINFNLPDDLEVYVHRSGRTGRAG
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mRNA from alignment at M-pyrifera_M_contig97300:2..709+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97300.22406.1 ID=mRNA_M-pyrifera_M_contig97300.22406.1|Name=mRNA_M-pyrifera_M_contig97300.22406.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig97300:2..709+ (Macrocystis pyrifera P11B4 male)
ACAACTGTAGCCGTTTACGGTGGAGCCAATATATCTACACAAATACGAGC
ACTGAATAATGGATGCCAAGTTGTAGTAGGTACTCCTGGTAGAATGCTCG
ATCTCATCAAAAGAAGAAAATTAGACGTGAGAAACGTCAAAACGTTAGTA
CTTGATGAAGCCGATGAAATGTTGAACATGGGTTTTCAGGATGATCTAGA
TGCTATTTTAGAGGATACTCCTAAGGAAAAACAAACGTTGCTTTTTTCTG
CAACGATGCCAAAAGGGATCGCTAAGATCTCTCAGAAATACATGAATAAT
CCGCAAGAAATTTCTGTAGGAGAGCGAAACTCAGGCGCTAAGAATGTAGA
ACATCACTTTTATATGGTGCACGCAAAAGATCGATTTGAAGCCTTAAAGC
GTACTGTAGATATGAATCCTGATATTTATGGGATCATCTTTTGTAGAACG
CGAAGAGAGACTCAGGAGATATCTACCAAGCTTAGCAAAGATGGCTATGA
TGTTGATTTATTGAACGGTGATTTATCACAAGGTCAACGTGACGAAGTGA
TGAACAGATTTAGAACCAAAGATCTTCAAATTTTAGTTGCTACCGATGTT
GCTGCACGTGGTCTTGATGTAAACGATTTAACCCACGTAATAAATTTTAA
CCTCCCAGATGACTTAGAAGTTTATGTGCATCGAAGTGGAAGAACAGGGC
GTGCAGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97300:2..709+

>mRNA_M-pyrifera_M_contig97300.22406.1 ID=mRNA_M-pyrifera_M_contig97300.22406.1|Name=mRNA_M-pyrifera_M_contig97300.22406.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig97300:2..709+ (Macrocystis pyrifera P11B4 male)
ACAACTGTAGCCGTTTACGGTGGAGCCAATATATCTACACAAATACGAGC
ACTGAATAATGGATGCCAAGTTGTAGTAGGTACTCCTGGTAGAATGCTCG
ATCTCATCAAAAGAAGAAAATTAGACGTGAGAAACGTCAAAACGTTAGTA
CTTGATGAAGCCGATGAAATGTTGAACATGGGTTTTCAGGATGATCTAGA
TGCTATTTTAGAGGATACTCCTAAGGAAAAACAAACGTTGCTTTTTTCTG
CAACGATGCCAAAAGGGATCGCTAAGATCTCTCAGAAATACATGAATAAT
CCGCAAGAAATTTCTGTAGGAGAGCGAAACTCAGGCGCTAAGAATGTAGA
ACATCACTTTTATATGGTGCACGCAAAAGATCGATTTGAAGCCTTAAAGC
GTACTGTAGATATGAATCCTGATATTTATGGGATCATCTTTTGTAGAACG
CGAAGAGAGACTCAGGAGATATCTACCAAGCTTAGCAAAGATGGCTATGA
TGTTGATTTATTGAACGGTGATTTATCACAAGGTCAACGTGACGAAGTGA
TGAACAGATTTAGAACCAAAGATCTTCAAATTTTAGTTGCTACCGATGTT
GCTGCACGTGGTCTTGATGTAAACGATTTAACCCACGTAATAAATTTTAA
CCTCCCAGATGACTTAGAAGTTTATGTGCATCGAAGTGGAAGAACAGGGC
GTGCAGGAACAACTGTAGCCGTTTACGGTGGAGCCAATATATCTACACAA
ATACGAGCACTGAATAATGGATGCCAAGTTGTAGTAGGTACTCCTGGTAG
AATGCTCGATCTCATCAAAAGAAGAAAATTAGACGTGAGAAACGTCAAAA
CGTTAGTACTTGATGAAGCCGATGAAATGTTGAACATGGGTTTTCAGGAT
GATCTAGATGCTATTTTAGAGGATACTCCTAAGGAAAAACAAACGTTGCT
TTTTTCTGCAACGATGCCAAAAGGGATCGCTAAGATCTCTCAGAAATACA
TGAATAATCCGCAAGAAATTTCTGTAGGAGAGCGAAACTCAGGCGCTAAG
AATGTAGAACATCACTTTTATATGGTGCACGCAAAAGATCGATTTGAAGC
CTTAAAGCGTACTGTAGATATGAATCCTGATATTTATGGGATCATCTTTT
GTAGAACGCGAAGAGAGACTCAGGAGATATCTACCAAGCTTAGCAAAGAT
GGCTATGATGTTGATTTATTGAACGGTGATTTATCACAAGGTCAACGTGA
CGAAGTGATGAACAGATTTAGAACCAAAGATCTTCAAATTTTAGTTGCTA
CCGATGTTGCTGCACGTGGTCTTGATGTAAACGATTTAACCCACGTAATA
AATTTTAACCTCCCAGATGACTTAGAAGTTTATGTGCATCGAAGTGGAAG
AACAGGGCGTGCAGGA
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