|
Homology
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: D7G419_ECTSI (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G419_ECTSI) HSP 1 Score: 438 bits (1126), Expect = 2.500e-149 Identity = 194/229 (84.72%), Postives = 207/229 (90.39%), Query Frame = 1
Query: 1 QAMDVEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPLPYMGGEQPGAPVNPNNPPLG 687
QAMD+EWTTYSGNAVSGTATFVHWPYRAARWMGD++R G Y +KN+SAI TL+ ++TMVDLYANETAVMGLQPVNEPWQFTP+DWLKDFYWD YHIVREQAPHWLFLMHDSF+FDV WGDFMKNCPTIGLDTHIYQAW+ PG QA YL SACDAK NI AMEE GMPVI+GEWSLATDNCAMWLNGFQDNLPGFPQ C VRCPLPYMGGEQPGAPVNPN PP+G
Sbjct: 211 QAMDIEWTTYSGNAVSGTATFVHWPYRAARWMGDWDRAAGEYTSKNESAIEFTLKVIQTMVDLYANETAVMGLQPVNEPWQFTPIDWLKDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLASACDAKNNIMAMEERGMPVIIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVG 439
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: A0A836CHB0_9STRA (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB0_9STRA) HSP 1 Score: 340 bits (873), Expect = 3.150e-111 Identity = 150/230 (65.22%), Postives = 179/230 (77.83%), Query Frame = 1
Query: 1 QAMDVEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPLPYMG-GEQPGAPVNPNNPPLG 687
+++++EWTT+S V+G ATFVHWPYR+A WMG F+ T TY KN++ + HTL ++ MVD+Y +V+G++PVNEPWQFTP+ WLK+FYW+ Y IVRE P WLFLMHD+F FDV IWGDFM NCP IGLDTHIY AW P QASYL ACD K + AME+ GMPV+VGE+SLATDNCAMWLNGF DNLPGFP+VQC Y CPLPY G G PGAPVNPN+PP G
Sbjct: 232 RSLNLEWTTFSSTKVAGAATFVHWPYRSANWMGTFDPHTATYVDKNEAHLQHTLDVIRIMVDMYKFVPSVIGIEPVNEPWQFTPVKWLKEFYWEGYQIVRETVPQWLFLMHDAFMFDVNIWGDFMLNCPNIGLDTHIYHAWLDPMPQASYLSYACDVKNALVAMEKKGMPVVVGEYSLATDNCAMWLNGFNDNLPGFPRVQCTYTPCPLPYTGAGVIPGAPVNPNSPPQG 461
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: A0A7S2R252_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R252_9STRA) HSP 1 Score: 286 bits (733), Expect = 1.230e-92 Identity = 125/221 (56.56%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 1 QAMDVEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPLPYMGGEQPGAPV 663
Q +EWT+ +G TF HWP R+A WMGDF+RET +Y N I H L ++ +VD Y N AV+GL+PVNEPWQFTPL LK FYW+ Y IV+ AP+W +++HDSF FD WG FM+ CP LDTHIYQAW P A+ + AC K+ I ME+A P+IVGEWSLATDNCAMWLNGF DNLPGFP++ C+YV C PYMG EQPG P+
Sbjct: 194 QCQGMEWTSQLNTEPAGLVTFEHWPIRSANWMGDFDRETTSYTNINYKQIQHALDTIQVIVDKYKNHPAVLGLEPVNEPWQFTPLKELKKFYWEGYLIVKNLAPYWKYIIHDSFRFDPETWGGFMRGCPDRALDTHIYQAWKNPAARTFFYEDACQQKQMIVTMEKAFGPIIVGEWSLATDNCAMWLNGFNDNLPGFPRLPCKYVECAKPYMGPEQPGTPL 414
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: A0A7S1ZG04_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZG04_9STRA) HSP 1 Score: 289 bits (740), Expect = 2.500e-90 Identity = 126/226 (55.75%), Postives = 160/226 (70.80%), Query Frame = 1
Query: 1 QAMDVEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPLPYMGGEQPGAPVNPNNP 678
Q+ D EWT+ +G TF HW R+A WMG+F+RET Y + N I H L+ ++ +V++Y AV+GL+PVNEPWQ+TP+D LK +YW+ Y IV++ AP+W ++MHDSF FDVGIWG FM CP LDTHIYQAW P ++ S+ +AC K I ME A PVIVGEWSLATDNCAMWLNGF DNL GFP++ C++V+C PYMG EQPG PV+P P
Sbjct: 209 QSQDFEWTSALNTEPAGLVTFQHWGIRSAAWMGEFDRETIEYTSTNYENIEHALETIQEIVNMYKGHPAVLGLEPVNEPWQYTPIDELKQYYWEGYLIVKKDAPYWKYIMHDSFRFDVGIWGGFMAGCPDRALDTHIYQAWQDPASRISFYNNACAQKSAIAKMEAAFGPVIVGEWSLATDNCAMWLNGFNDNLSGFPRLPCKFVKCADPYMGTEQPGTPVDPGKP 434
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: A0A1E7FG06_9STRA (Exo-1,3-beta-glucanase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FG06_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.350e-88 Identity = 124/226 (54.87%), Postives = 155/226 (68.58%), Query Frame = 1
Query: 1 QAMDVEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPLPYMGGEQPGAPVNPNNP 678
QAM +WTT + TF HWP R A+W+G F+++T +Y + N I H L ++ MVD+Y + AV G++PVNEPWQ+TP+ LK FYW+ Y IV+ AP+W ++MHDSF D IWG FM CP LDTHIYQAW P ++ + AC K+ I AME+A PVIVGEWSLATDNCAMWLNGF DNLPGFP+ C+Y+ C PYMG EQPGAPV+P P
Sbjct: 221 QAMGFQWTTALNQEFTSDHTFEHWPIRDAKWIGTFDQDTASYSSINYENIQHALDVIQIMVDMYRSHPAVQGIEPVNEPWQYTPITTLKRFYWEGYLIVKRSAPYWKYVMHDSFRLDPNIWGGFMAGCPERALDTHIYQAWKDPDSRIGFFKDACSNKQAILAMEQAFGPVIVGEWSLATDNCAMWLNGFNDNLPGFPRSPCKYIPCSAPYMGDEQPGAPVDPTKP 446
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: B7GA46_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GA46_PHATC) HSP 1 Score: 276 bits (706), Expect = 3.090e-87 Identity = 120/226 (53.10%), Postives = 153/226 (67.70%), Query Frame = 1
Query: 1 QAMDVEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPLPYMGGEQPGAPVNPNNP 678
+ M WT+ + SG TF HWP R+A W+GDF+ +T +Y + N + I H+L+ V +V YA AV+GL+P+NEPWQ+TP+D LK FYW+ Y IV+ +AP W ++MHD F F WG FM+ CP LDTHIYQAW P ++ + AC K NI ME A PVIVGEWSLATDNCAMWLNGF DNLPGFP++ C++ C PYMG QPG PV+P+ P
Sbjct: 103 KTMGFRWTSNLNSEFSGLTTFEHWPIRSAAWVGDFDPQTASYSSINYANIQHSLKVVLDVVTRYAEHPAVLGLEPLNEPWQYTPIDTLKRFYWEGYLIVKLKAPFWKYVMHDGFRFGPDFWGGFMEGCPERALDTHIYQAWRDPDSRIGFFTDACQQKSNIATMERAFGPVIVGEWSLATDNCAMWLNGFNDNLPGFPRLPCKFTPCAEPYMGPGQPGTPVDPSKP 328
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: A0A0P1AIM8_PLAHL (Exo--beta-glucanase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIM8_PLAHL) HSP 1 Score: 280 bits (717), Expect = 3.870e-87 Identity = 122/224 (54.46%), Postives = 154/224 (68.75%), Query Frame = 1
Query: 13 VEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPL--PYMGGEQPGAPVNPNNP 678
V+WT+ + GT TF HWP R+A W G+FN T TYD+ N + + H+L V +VD YA+ A++GL+PVNEPW+ TP+D LKD+YW SY V+ +APHW F++HDSF F V W FM+ CP I LDTHIYQAW++PG Y +AC K + ME A MPVIVGEWSL TDNCAMWLNGF DNLPGFP +QC +CP+ Y+G E PG P++ P
Sbjct: 230 VKWTSRASTRPVGTTTFEHWPVRSAGWAGEFNATTNTYDSINYNHLNHSLTTVALIVDRYADHPAIIGLEPVNEPWELTPIDLLKDYYWKSYKRVKARAPHWKFVLHDSFRFGVQYWSQFMRGCPDIALDTHIYQAWHSPGTSEDYFSNACQQKYTLAEMENALMPVIVGEWSLGTDNCAMWLNGFNDNLPGFPNIQCRSTKCPVYSTYLGLEFPGTPLDTTRP 453
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: H3G8U3_PHYRM (X8 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3G8U3_PHYRM) HSP 1 Score: 276 bits (706), Expect = 9.600e-87 Identity = 119/220 (54.09%), Postives = 150/220 (68.18%), Query Frame = 1
Query: 13 VEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPL--PYMGGEQPGAPVN 666
V+WT+ + GT TF HWP R+A W G+F+ T TY + N + H+L V +VD YA+ A++GL+PVNEPW+ TP+D LKD+YW SY V+ +APHW F++HDSF F V W FM CP I LDTHIYQAWN PG ++ Y +AC K + ME A MPVIVGEWSL TDNCAMWLNGF DNLPGFP +QC +CP+ Y+G PG P++
Sbjct: 106 VKWTSTASTRPIGTTTFEHWPVRSAGWAGEFDPATNTYKSINYEHLNHSLSTVAAIVDRYASHPAIIGLEPVNEPWELTPIDLLKDYYWKSYKRVKARAPHWKFVLHDSFRFGVQYWSQFMSGCPDIALDTHIYQAWNAPGTRSDYFANACQQKYMVAEMENAMMPVIVGEWSLGTDNCAMWLNGFNDNLPGFPNIQCRMTKCPVRSTYLGEGFPGTPLD 325
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: A0A484E6I4_BRELC (X8 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6I4_BRELC) HSP 1 Score: 277 bits (708), Expect = 1.140e-86 Identity = 120/227 (52.86%), Postives = 153/227 (67.40%), Query Frame = 1
Query: 4 AMDVEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPLP--YMGGEQPGAPVNPNNP 678
A V+WT+ + GT TF HW R+A W G+F+ T +Y + N + H+L+ V +VD YA+ A++GL+PVNEPW+ TP+D LK++YW SY V+ +APHW F++HDSF F V W FM+ CP I LDTHIYQAWN+PG Y +AC K I ME A MPVIVGEWSL TDNCAMWLNGF DNLPGFP VQC+ +CP+ Y+G PG P++ P
Sbjct: 136 ASSVKWTSIASTRPVGTTTFEHWTVRSAEWAGEFDPVTNSYKSINYEHLNHSLRTVAAIVDRYAHHPAIIGLEPVNEPWELTPIDLLKEYYWKSYKRVKARAPHWKFVLHDSFRFGVAYWSQFMRGCPDIALDTHIYQAWNSPGTSTDYFSNACQQKYTIAEMENAMMPVIVGEWSLGTDNCAMWLNGFNDNLPGFPTVQCQTTKCPIQSTYLGNNFPGTPLDTTRP 362
BLAST of mRNA_M-pyrifera_M_contig9727.22401.1 vs. uniprot
Match: W2RBF6_PHYPN (X8 domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2RBF6_PHYPN) HSP 1 Score: 278 bits (710), Expect = 4.400e-86 Identity = 121/220 (55.00%), Postives = 151/220 (68.64%), Query Frame = 1
Query: 13 VEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAHTLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQAPHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLVSACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQCEYVRCPL--PYMGGEQPGAPVN 666
V+WT+ + GT TF HWP R+A W G+F+ T TY + N + H+L V +VD YAN A++GL+PVNEPW+ TP+D LKD+YW SY V+ +APHW F++HDSF F V W FM+ CP I LDTHIYQAWN PG ++ Y +AC K I ME A MPVIVGEWSL TDNCAMWLNGF DNLPGFP +QC +CP+ Y+G PG P++
Sbjct: 232 VKWTSIASTRPIGTTTFEHWPLRSAGWAGEFDPATNTYKSINYEHLNHSLATVAVIVDRYANHPAIIGLEPVNEPWELTPIDLLKDYYWKSYKRVKARAPHWKFVLHDSFRFGVQYWSQFMRGCPDIALDTHIYQAWNAPGTRSDYFSNACQQKYMIADMENAMMPVIVGEWSLGTDNCAMWLNGFNDNLPGFPNIQCRMTQCPVHSTYLGQGFPGTPLD 451
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 434.5 |
Seed ortholog evalue | 3.1e-119 |
Seed eggNOG ortholog | 2880.D7G419 |
KEGG rclass | RC00467 |
KEGG ko | ko:K01210 |
KEGG Reaction | R00308,R03115 |
KEGG Pathway | ko00500,map00500 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000272,GO:0003674,GO:0003824,GO:0004338,GO:0004553,GO:0005575,GO:0005576,GO:0005623,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0008422,GO:0009056,GO:0009057,GO:0009251,GO:0009986,GO:0009987,GO:0015926,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0071704,GO:1901575 |
EggNOG free text desc. | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
EggNOG OGs | 2QPYU@2759,COG2730@1 |
EC | 3.2.1.58 |
COG Functional cat. | G |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000 |
Exons | 6 |
Model size | 687 |
Cds size | 681 |
Stop | 0 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816889.1226597-CDS-M-pyrifera_M_contig9727:480..570 | 1622816889.1226597-CDS-M-pyrifera_M_contig9727:480..570 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 481..570 - |
1692278238.1895382-CDS-M-pyrifera_M_contig9727:480..570 | 1692278238.1895382-CDS-M-pyrifera_M_contig9727:480..570 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 481..570 - |
1622816889.134168-CDS-M-pyrifera_M_contig9727:1635..1715 | 1622816889.134168-CDS-M-pyrifera_M_contig9727:1635..1715 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 1636..1715 - |
1692278238.206599-CDS-M-pyrifera_M_contig9727:1635..1715 | 1692278238.206599-CDS-M-pyrifera_M_contig9727:1635..1715 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 1636..1715 - |
1622816889.1453583-CDS-M-pyrifera_M_contig9727:3329..3429 | 1622816889.1453583-CDS-M-pyrifera_M_contig9727:3329..3429 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 3330..3429 - |
1692278238.219599-CDS-M-pyrifera_M_contig9727:3329..3429 | 1692278238.219599-CDS-M-pyrifera_M_contig9727:3329..3429 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 3330..3429 - |
1622816889.15715-CDS-M-pyrifera_M_contig9727:4060..4210 | 1622816889.15715-CDS-M-pyrifera_M_contig9727:4060..4210 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 4061..4210 - |
1692278238.2301157-CDS-M-pyrifera_M_contig9727:4060..4210 | 1692278238.2301157-CDS-M-pyrifera_M_contig9727:4060..4210 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 4061..4210 - |
1622816889.1696596-CDS-M-pyrifera_M_contig9727:5063..5183 | 1622816889.1696596-CDS-M-pyrifera_M_contig9727:5063..5183 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 5064..5183 - |
1692278238.2408578-CDS-M-pyrifera_M_contig9727:5063..5183 | 1692278238.2408578-CDS-M-pyrifera_M_contig9727:5063..5183 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 5064..5183 - |
1622816889.1815617-CDS-M-pyrifera_M_contig9727:8817..8958 | 1622816889.1815617-CDS-M-pyrifera_M_contig9727:8817..8958 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 8818..8958 - |
1692278238.2518024-CDS-M-pyrifera_M_contig9727:8817..8958 | 1692278238.2518024-CDS-M-pyrifera_M_contig9727:8817..8958 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9727 8818..8958 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816889.1928287-UTR-M-pyrifera_M_contig9727:8958..8964 | 1622816889.1928287-UTR-M-pyrifera_M_contig9727:8958..8964 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig9727 8959..8964 - |
1692278238.2677252-UTR-M-pyrifera_M_contig9727:8958..8964 | 1692278238.2677252-UTR-M-pyrifera_M_contig9727:8958..8964 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig9727 8959..8964 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9727.22401.1 >prot_M-pyrifera_M_contig9727.22401.1 ID=prot_M-pyrifera_M_contig9727.22401.1|Name=mRNA_M-pyrifera_M_contig9727.22401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp
MDVEWTTYSGNAVSGTATFVHWPYRAARWMGDFNRETGTYDAKNQSAIAH TLQAVKTMVDLYANETAVMGLQPVNEPWQFTPLDWLKDFYWDSYHIVREQ APHWLFLMHDSFHFDVGIWGDFMKNCPTIGLDTHIYQAWNTPGAQASYLV SACDAKKNIQAMEEAGMPVIVGEWSLATDNCAMWLNGFQDNLPGFPQVQC EYVRCPLPYMGGEQPGAPVNPNNPPLG back to topmRNA from alignment at M-pyrifera_M_contig9727:481..8964- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig9727.22401.1 ID=mRNA_M-pyrifera_M_contig9727.22401.1|Name=mRNA_M-pyrifera_M_contig9727.22401.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8484bp|location=Sequence derived from alignment at M-pyrifera_M_contig9727:481..8964- (Macrocystis pyrifera P11B4 male) CAGGCCATGGACGTGGAGTGGACAACTTATTCTGGTAATGCGGTTTCGGG
AACGGCAACGTTTGTTCATTGGCCCTACCGCGCCGCCCGATGGATGGGCG
ATTTCAATCGAGAAACGGGGACGTACGACGCCAAGAATCAGTCTGCGGTA
TGTGCCGCGCCTAAGAGGTGTTGGTGTTGTTGGTGGTAGTGGTAGTGGTA
GTGGTGATGGCGATTGCGTTGTTAGTTGTTCTTGTTGTTGGTGTTGGTGG
TGGCGCTCTTTTGTTGCTTTTGTTGTCGATGTTGCTGTTGCGGTTGTGGT
TCTTGCTGTTGTTTTTCCTCTTCTTGACCCTGTTGCGCCGCCCGATGGAG
GGCGACTTCAACCGAGACACGGGAAAGTATGACTCGAATGACATTTCTGC
GGTATGTATGTGCCAGGTATATATGTGCCGTGTGTCAAGGCTTCATAGGC
GCGCTGCAGTCGCTCCGGTTGAGTATTTGGGCATGCGATTGCTACGGTGC
CAAAAAGAGCAGAAAGATCGAATGACAAACGCTTCTTTTTTTTTTTTGTA
GACATCTGTCTCCCGTTTGCGTTATATATACAACAGCCGCAACAAATCGC
TCTCAGATTTCTTTGCACCGGCGGGTGACTCGGCAAGAGATTTGCGGAGC
ACTGCCTCCTGAAGGGGGGCGTTCGCGTTTCCCGCTTCATACGAGTCTTC
CGTCGGTGGCGGGACCTGGCCTGCTCTTTTCGAGGCAATGCCCCGATTAG
TGCCGAAGCCGAATCGAAGTCACGCAGCAGTATGCGTTTGGCAGGGCTCT
CCACGGATCATGACCCGACATGCGGGTCGGGTCAGGAGGTCTTCAACATC
TCACGGTTCGGTTCGGGTCGGGTCGCGTCGCGTTGGATCGGATCGTGCGG
GGTCGGGTCGGGTCAGGAGGTCTTCAAAATCTCACTCGTCGGTTCTTGGT
CGGGTCAGGTGACCCGAACCGACCCGCGAGGTTTGATCCGACCGGTGAAA
CAGCCCTGGTGTCTTGTTGTTTAGAAAGACAGAAGAGATGACCTACTGTG
CTACGTAGTCAGCGCTGACTTACTAATAGTACTGTCTTAGCGCTGACTTA
CGACTGTCTTAGCACTGGAGTGGTACCCGACACGCGCTGTGTCTGGAGTA
GAAATTAGTATTACGGGGGGCCATGGTAAATAGGACCTACGGTACACACA
AAAACCTATATTTTAACCTATTTTACCAACCATATTTGGTCCTATTTACT
ATGGCCCCCGGTGATAGCATTTTTGCACCGAAACATTTGCCAATGACAGG
GTTCTTTCCTCAAGTGAGAGCAAACACTACCCAACGTCACTGGGAATACT
AGTTTATTAATACCTGGTAGTAGTTCGCTATGTTATTCGAACAACACGTA
TGATTGGCGCCCGTGTTAAAAAAATGCATTTTATGGGAAGAGATATAGAG
CTTCTACACTATAATCAGGTGAGAAGCTCATAAAAAGTTGTTGATGTACA
CTCCTACCGTGGCGTACGTCAGACGTGGTAGTGCTGTATGTTCAGTAGCC
TTTCCCTTCTGATGAAAAATACCGGGTGTGTCGTAGATCTACAGCACGGT
AGGTTATCGCTGAATATGTGGACTACCGTTGTATGTGACAAAAGGTTTTG
CCTTCTAATGAACATACCAGGTCTTGTCCCACGTAAACAGCACAGTAGGT
TATCACTGACCAAGTAGCCTACTGTTGGGTGTCAGTAGGTTTTCCTTTCT
AACGAACAAACCAGGTACTATGTCGTACGTATGCGGCACAGTATCCTAGG
TTATCGCAGACGAGGACATCGCTGACCAAGTAGCCTACTTTAAGTAGGTT
TTCCCTCGTAACGAACATACCAGGTATGTCGTAGATGGCATGGCAGGTCA
TCGCTTCAAACCAACAGATGCCGCTTACCTCAAACGAAGATACGCAGCAG
CAGCAGCAGCGCCGTCGCTTGCGAGACAATGCAATCGCTGTCTGTCGACC
ACCCAAACCTTAACCCCCCCCCCGTTTATATATGGTAAGGCACCCACGAG
GCAGTTACATAGTACACCTATTGCTGCCTCCGGATCTGACCACACCAGAA
AATAAAGCATTTCATTGACGCTGTAATATATATGCAAGGTAATCCGCTCA
GAAGCGGCTCTTAGTAGGATGCAGCTCACCCTTCAAGCGACTCGCCCAAC
ACCTCACGGCGCTTCGCGCTTGGTGCAAGCAATGTCTGCCTGGTCGGTGA
AAACCCGACGTGCTCCGTCCCGGCATTGTAGAGATGCGAGGGTCTATGGT
CATACCACTACCCATCGGCCGTGCATGACAATGAGTACACCCCCCCTGTA
TATCTGTATATAGGTTGGTTTGGCAACGGTTGGCAACGACACTGTAAAAC
ATACCGCTCACTACGTAGGCTAGACAACCAGGGTACCGTTTTTTCTTTTT
GGTGATCGGTCACGGCTGGCAATCGAGTCATGGATCATTTGTGCGGTGGA
GAACCTTTCCTCCGCACAAGGGGAATGGTCACATCGCGCAGTGTTTATGG
TAAGGCACCCACGATGCAATTACATACAGGTAATATCCCCGTTGCTGTCT
CTGGACGAGGCCACACCGGAAAATAAATTAACTCACTGAAGCTGTCATCC
ATGTGTAAATCCACCTTACAAGCGGTTCTTAGTATGCGACTCGCCGAACA
CCTCACGGCGCTTGCTTCGCGCTTGGTGCAAGCAGTGTCTGCCTTATGGG
TGACAAGCCGACATGCTCCATCCCGGCATTTTCGGGGTGCGAGGGTCTAT
GGTCATACGACTACGGCCATGCATGATATCGAGTACACCCCCCTCTCCCC
CCCTCCTCTTCGCGTTTGCGCTTCGCATTGTGCTTCGCGTTGCGCTTCGC
GTTGGCGCTTCGTGTTGGTGTTTTGCGTTGTGCTTCGTGCTGATGCTTCG
CGTTGCGCTTCGTGTTGGTGTTTTGCGGTGTGTTCCGCGTTGTGTTTCGC
GTTGCGTGCTGCCGCCACGTCGCGCTCTCGCATCAGATGGTACAGAAAAT
AGTGATGTAATCGCCACCTGTCGACCCAAAGCTTCCACATGTCTGACAGA
TCATCTGCAGATAGATCAGATGGATCCTATCGTGCCGTTATGATATGAGA
TACTGTGCAGGATCTATTTGTCACGGTACAGATCCGATCCAGGAAACGTA
TGCCATAGATCACGCAGATCTATACGGCTTTCACCCTGACCCTAGCCTCA
GATCAGGACAGTGCCAGCTGCCCCAAAAGAGAACGTGACCTACAGCAGAC
CACGAAACAGATCAAGAAATTAGGCTGCCCTGATACACAACACGAGCTAG
ACTAGACATATCAGGCATGTATCTTCCTTGAAACATGCTAAGGTATAAAA
GTACGCCATCTTTTTCTGGGTGTACTGACTTGATGATAGTATAGGAGCTC
TATACCCCACCCGAAACGCCGATCTTGAGAAAAATGTAAGGGCGATGGTT
GACGAATAATCCCATGTCCTAAGTAAACAAACCAACATTAAAAAAAATGT
TGCAATAAAATTATAAATAAATGTCATTCTGACGATTTCGGGTTGAGGAG
ACACTTGATTCAGAAAACGTTTTTTAGTTAGAAAGTTCTACCCTTTTATT
GATGCACTTGTCCCCTGACGGATTTAGATCGTTCGCCAAGTGGCGAAGAT
ATGATCTGTGTTGATCTGTCCGATGTGAAAGACCTTCCCCTTTCCCCCCT
CTTCTCGTTGCGCTTGGGTGCTGTCGCTCAGATCGCGCACACGTTGCAGG
CGGTGAAGACGATGGTGGACCTCTACGCGAACGAAACCGCGGTCATGGGC
CTCCAACCCGTCAACGAGCCGTGGCAGTTCACCCCCCTTGACTGGCTCAA
GGTGCGCCCGCTCTTAGCGTTTATGAACTTGAAAAACAGACAAGAAGAAA
AGATAAGCCACGCCTCAGCTGTCCCAGCTGCCTTTTGTGAGATCGGAGAT
TTTAGTCGAAACTCTCGGCTTTGCAAGCCAGCCGGGTGTGATGCTTCGAT
CGTGCCCGCTTTGTCTGTCGCCGGCGCGGTCTTCCGCAGTGTCGCGGTGC
TTCACGAGTTGGCCCGGCCTCGACTAAATGGTTGAGAGTCGACCTTCACC
CCTCACTACGTTTTCATTCCGAATCAAAATCCGAGAAAATTCCCACGCAC
TCGGGGTTAGAGTTTGTGTTTACAGTGGTGTAGACGCGTGCTGGGACACG
GGTAACACTTTTTGTCAGAAATGTTTTCTGAATGACGGGGACTCAATCGC
CGGAATGTCGGTATTTTTTTTTTTGCAATATTAGAGAGTTTGCGAAAAAC
AATCTTCCGAAATTTGCTTCCCTTCCGCTAAAAAAAGTAGATTCCCTTCC
CACCAAAATCTTGGTTTGTTTGCGGACGAGGTGAACTAAATCCTGCAGGC
GACGCCTTCGAAGTTGAGGAGGGGAGTGGGGATGTGCGGCAACGCGTGCG
GCCAACCAAAAAAGATAACAAGAAAAAAAAAACTGCGTGCGAGTAGCAAC
GGCAGCCTAGCATCGGAAAAAAAAACGAAACCCACTCTATTTCGCTCATT
TTCACTTTTTAGGAATAATCGACCCCAAATGCAGGATTTTCGGTGTGACA
ATTCTATACCACATCGTGCGAGAGAACAGGCGCCTTGCTCACTCACTGGC
TCTTCCTCGCTATTTTTTTTTTCTGTCTTGGGGGGTGATCGGCCGCGAAT
GCAGGATTTTTACTGGGACAGCTACCACATCGTGAGAGAACAGGCGCCTC
ACTGGCTCTTCCTCATGCACGACTCCTTCCACTTTGACGTCGGCATCTGG
GGAGACTTCATGAAGAACTGTCCGACGATCGGTCTCGACACCCACATCTA
TCAGGTGAAATCAATCATCGTCGGGTTTTTTGTTCTTGTGTTTGTCTTTT
TTCTTCCCATTTTTTTCTCTTCGCCCCTCTTTTCTCTCTCCCTACCAGTC
GTAACCCAGATCCAGGGTGACATACAGTAGCAGGTCTCCTCCCGCCCCTC
CCGCCTGCGTGCCTTGCGTTTTTTTTTAATCGCGAGAAGTTTTGAGCCCT
TACTTCCCTGGTCGCTCGCATCGCTACCTTTTCGTAGCGTCCGCAAAAAA
ATTAAGCAGTAGTTGCGAGGTTCGGAGTTCTCTTTATTTTCGGTGTGGCT
CGTAGGTAGACGGTGCGATGCAATGCTTGAAGGTACAGGCGTTCCCCCAT
GACACCATCTAGATATGTGCCAGGAAACGATGCTTTAGAATACCCCATAA
ATGTGTAGGTGGTGCGATGCATTGCTGGAAGGTGTACGACACCGTAAAAA
TGGGTGTCGGGATGCAATGGTTGGAGAAGGTGTCTTGGCGTGTGTGACCG
CTCCCGCACCCCCGCCGTCGCGTCGCTGTCCCTGAGCGCGTCGTATACAC
TCGTCGCTCTCCCCTCCGCGAAAAACGCCCTCCCGCCTCTCCTCGCGCAT
GCGGTGCTGGTACCCGCGCCGGTGCATGGCCACAGGCGTGGAACACGCCC
GGGGCTCAGGCGAGCTACCTGGTCAGCGCTTGCGACGCTAAGAAAAACAT
CCAAGCGATGGAAGAGGCCGGCATGCCTGTTATCGGTGAGACCCCCCCCC
CTATCCCCTATCCCCCTCCCTCTCCCCTCCTCCCCCCCCCGTCCCCTCCT
TCCCTCCCTCCCCTCCAGGCCTCCCCGCCCCTCCCCCCCAGCCCCCCCCC
GATTCCTCCTGCCCCCTCGCATCTGGGCTTTCTATTGCCTTACAACCATC
TCGTGTCAGGGCTCGGGGGGTAGAGCAGGGTTCTAGGCGAGATGTCGCTC
TTTGAGGGCCGTCAACGCCTTTAGAACTGCGCCTATCACAATATTACTTG
GAATCATTACTACTTGGAATCATTGGAGTTATTAACTGGGCCTGTATACG
CACGAATGGTGCAGGGTAATCTGTTCACACGTTTTTGTGGACAACGAACT
ACTTGGAAACACAGCAGTAGTTTTGGAACCTCCACGCTCGTTTTTTGTTG
TGGACGGATGATTTGGAGTTTCTTTTTTGCAGGAGCGTTTTTGCGCGCAG
TTGGAGCGTGAAACCTGCACACCTACATCGTACGTACGCTTTTGGGGACA
ATTTTTAATGGATTTAATGTTGGAGCGGCTGCACCCACTTTTTTGTCGGG
TGGGGGGAGGGATAAATTACTCCGAAGAATTCAAAATGTTTTAGATTTAC
GAAAATACGTGTGAAACAAAAAAACATGGAATAACTGTCTCGCAAGTTGT
ACAGGATATAGGTACTGGCGGCAACGGGAGGGTATTTATTACCTGCACCG
ACTTTTTTTGAGGACAAATGACTTGGACTTACAGTACTTGCAATACTTGG
GAGTAGGTCTAGACTATTTCGGAGGGCCATAGTAAATAGCACCTACAATA
AAAAAAAAAATCTATATATTTCCCTGTTTTTACTAACAAAATTTGGTCCC
ATTTACTACGGCCCCCCGTAATAGTGCCACGGTAGAGTGTATTGTGTGTA
TATACGTACGTCGTAAATATAATAATATGAAGTATTGTACGTATCTGGTG
TACTATGTAAAGGAAATCCTGAAAAATACATACGCTCGCGAGACACGGCT
TGAGCACGGCCTAGGTTGCTCCTGGTATCGACACGGTCGGGGTCGGCGAG
CACTCGGCGAGCACGATGAGGTAAGTAGCGCATCGCCAGGTGCACCTCGT
CGCGAGGTATCGCGAAAACGGCCCAAGACTACGGTTGAGAGAAGCCGAGG
GATGTCCCTGGCGGCACAGATCCGACCCGGAAAACTAGTCCTAGATCATG
CAGATCATACGGGTCCCCCCCGGCAACGTGCGATAGATCATGCAGATCAT
ACAGATCATACAGATCTTACAGATCATACAGATCTTACAGATCAAGGATA
TGTCTATCTTCCCCGAAAGATGTAGATCATGATCTGTACCAGGTATTTGA
TATGGACATGATCTGTAGATGATCTATCCCTGTTGTCGAACATGGACAAA
GTCGAAAATCTTTCAGTCATCTTCGGCGCATGTGACGTTCGGCATGCAAC
GCACCGCCTCTCGATTGGTTGAATGCAACATCTGCCGCGTCTTGACTGAT
TTTTTCGTTTCCGAACCCCATCCGTCGCCCGCTGGCCGCCCCATGCCCCA
TTTTGCCCTGCGAAATCATCTTTTGTGCTGGACGTTGTGTTGTGTGCAGT
GGGAGAATGGTCGCTGGCTACGGACAACTGCGCCATGTGGCTCAACGGAT
TCCAGGATAACTTGCCTGGCTTCCCGCAGGTACAGCAGTAGGGGTCGCGG
TTCAAGAGCTATAGGTATCGGTTTAAGAGAAGTACTACTGTAGTCTAATA
TCGTGGCTCAATAGGCCTGGCACGGGGACACTAGAAACTACACGTGTGCA
TTCCGGTGCAACGTTCCCTTCGGATTTCACCGGGGAAAATTGCCGAAACG
GAATGACTTGACTGTGGTACAACATCGCCCACACAAAGGAAGAGCAGCCT
ATCACCCACCTGCAGGGGTGTGTCCGAAGTGCAGTATGAGGAGGTTCAAG
GCGGACGCGTATCATGATAACGCTGCTCCATGTCATTCCGCACGCTCATC
CTTCGACGCTTGAATGATGAGCACGCTTTCTCTTTCGGCTTTGGTTGCTA
TGCCTTGGCCCCTGCCCGGTTTATGAACCTCTTGGGACATTAGAGGGCAA
AAAATGACGACCAAAAGTGACTATTACTACAGCGACGGCCACTGCGCGAT
TGGAGGGTGATACTATTAATAGTAGTAGTTATCGGTGTCCGAGTTACCAT
GATTGAAAGGAAGGAGTCGTACGGCACGGGTGCAAGATTACCCCACCCCT
ACCCCTACCCCTACTGCTGGGCTGGGCTGGGCGCTCCTGCTACTCGCAGA
TGGTTGAGAACACCAAAGTTACCAACCATTGTTTGGTCGCTATCTTGAAC
ACCCAAAGTGCCTAGGAGAAAGTCGGGTTTTAACAAAGGAGGTTAAGCAG
GCCTTGACACCTCTCCCTCTCTCAAGGCGTCACTGACCCCCGCCAACATA
TATTCTGGAAAAATAAAACAAAAAACTACTACGAACTGTTTGTAGCATTG
GCCTCGCCCAAACCAATACCGCGCTATCCGAAAATGTAGGCACCTTTTGA
ATATTCGTATTGATACACAAACGGCCATTACATTTTACGTACAGAATAGT
TTGTACCTGGTACATATAAACATGCTTAGTTTTTTCAGTGCCAGGACGCA
GCCAGCTCCTCTACGAGTACGGGGTTGGGCCTTCAGTTTGTTGACGGAGG
GCTGAAAATATGTGCTGTCGTGATTTTTTCACCGCCCGTTCCAGGTCCAG
TGCGAGTATGTACGATGCCCCCTGCCGTATATGGGCGGAGAGCAGCCCGG
AGCCCCGGTGAACCCGAACAATCCTCCCCTCGGT back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig9727:481..8964- >mRNA_M-pyrifera_M_contig9727.22401.1 ID=mRNA_M-pyrifera_M_contig9727.22401.1|Name=mRNA_M-pyrifera_M_contig9727.22401.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1362bp|location=Sequence derived from alignment at M-pyrifera_M_contig9727:481..8964- (Macrocystis pyrifera P11B4 male) ATGGACGTGGAGTGGACAACTTATTCTGGTAATGCGGTTTCGGGAACGGC AACGTTTGTTCATTGGCCCTACCGCGCCGCCCGATGGATGGGCGATTTCA ATCGAGAAACGGGGACGTACGACGCCAAGAATCAGTCTGCGATGGACGTG GAGTGGACAACTTATTCTGGTAATGCGGTTTCGGGAACGGCAACGTTTGT TCATTGGCCCTACCGCGCCGCCCGATGGATGGGCGATTTCAATCGAGAAA CGGGGACGTACGACGCCAAGAATCAGTCTGCGATCGCGCACACGTTGCAG GCGGTGAAGACGATGGTGGACCTCTACGCGAACGAAACCGCGGTCATGGG CCTCCAACCCGTCAACGAGCCGTGGCAGTTCACCCCCCTTGACTGGCTCA AGATCGCGCACACGTTGCAGGCGGTGAAGACGATGGTGGACCTCTACGCG AACGAAACCGCGGTCATGGGCCTCCAACCCGTCAACGAGCCGTGGCAGTT CACCCCCCTTGACTGGCTCAAGGATTTTTACTGGGACAGCTACCACATCG TGAGAGAACAGGCGCCTCACTGGCTCTTCCTCATGCACGACTCCTTCCAC TTTGACGTCGGCATCTGGGGAGACTTCATGAAGAACTGTCCGACGATCGG TCTCGACACCCACATCTATCAGGATTTTTACTGGGACAGCTACCACATCG TGAGAGAACAGGCGCCTCACTGGCTCTTCCTCATGCACGACTCCTTCCAC TTTGACGTCGGCATCTGGGGAGACTTCATGAAGAACTGTCCGACGATCGG TCTCGACACCCACATCTATCAGGCGTGGAACACGCCCGGGGCTCAGGCGA GCTACCTGGTCAGCGCTTGCGACGCTAAGAAAAACATCCAAGCGATGGAA GAGGCCGGCATGCCTGTTATCGGCGTGGAACACGCCCGGGGCTCAGGCGA GCTACCTGGTCAGCGCTTGCGACGCTAAGAAAAACATCCAAGCGATGGAA GAGGCCGGCATGCCTGTTATCGTGGGAGAATGGTCGCTGGCTACGGACAA CTGCGCCATGTGGCTCAACGGATTCCAGGATAACTTGCCTGGCTTCCCGC AGTGGGAGAATGGTCGCTGGCTACGGACAACTGCGCCATGTGGCTCAACG GATTCCAGGATAACTTGCCTGGCTTCCCGCAGGTCCAGTGCGAGTATGTA CGATGCCCCCTGCCGTATATGGGCGGAGAGCAGCCCGGAGCCCCGGTGAA CCCGAACAATCCTCCCCTCGGTGTCCAGTGCGAGTATGTACGATGCCCCC TGCCGTATATGGGCGGAGAGCAGCCCGGAGCCCCGGTGAACCCGAACAAT CCTCCCCTCGGT back to top
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