mRNA_M-pyrifera_M_contig97220.22392.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A0A6I6ACH3_9PLAN (ABC transporter permease subunit n=9 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ACH3_9PLAN) HSP 1 Score: 437 bits (1123), Expect = 5.770e-146 Identity = 234/236 (99.15%), Postives = 234/236 (99.15%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWGFWGVGLLLPFMLHPLSLELSASL 708 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAG LYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLF PSWGFWGVGLLLPFMLHPLSLELSASL Sbjct: 416 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGTLYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFLPSWGFWGVGLLLPFMLHPLSLELSASL 651
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A0A518A0F9_9PLAN (ABC-2 family transporter protein n=5 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A0F9_9PLAN) HSP 1 Score: 413 bits (1061), Expect = 1.400e-136 Identity = 221/236 (93.64%), Postives = 229/236 (97.03%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWGFWGVGLLLPFMLHPLSLELSASL 708 LIPLSALFSALCL+LATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLS VNAGALYVYAIPVLV+SIGYSLLALWWAIDQFQREDVLFREAERFE+GLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFA++NT+R+AILTAPES RAVRSM LLMIQQLAIIATPALIMGIMLTTSVRKTFRL+ P GFWGVGLLLPFMLHPLSLELS SL Sbjct: 425 LIPLSALFSALCLALATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSTVNAGALYVYAIPVLVTSIGYSLLALWWAIDQFQREDVLFREAERFEVGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFALINTIREAILTAPESQRAVRSMLLLMIQQLAIIATPALIMGIMLTTSVRKTFRLYLPRLGFWGVGLLLPFMLHPLSLELSLSL 660
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A0A517R9D9_9PLAN (ABC-2 family transporter protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517R9D9_9PLAN) HSP 1 Score: 386 bits (992), Expect = 8.450e-127 Identity = 205/236 (86.86%), Postives = 221/236 (93.64%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWGFWGVGLLLPFMLHPLSLELSASL 708 LIPLSALFSALCL+LATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYS+MP+VGVALLLKGMLLS+VNAG LYVYAIPVLV+S+GYSLLALWWAIDQFQREDVLFREAERFE+GLWLKHLMRTKDALPSFAEAGFCFV+IMLLQF VMNTM DAI A ++ R +R MQLLMIQQLAIIATPAL+MGIMLTTS+RKTFRL+FPS GF VG +LPF LHPLSLEL+ SL Sbjct: 376 LIPLSALFSALCLALATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSLMPVVGVALLLKGMLLSSVNAGILYVYAIPVLVTSVGYSLLALWWAIDQFQREDVLFREAERFEVGLWLKHLMRTKDALPSFAEAGFCFVLIMLLQFGVMNTMGDAIRMATDAERPLRMMQLLMIQQLAIIATPALMMGIMLTTSMRKTFRLYFPSLGFLAVGFILPFALHPLSLELAVSL 611
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A0A517WTI5_9PLAN (ABC-2 family transporter protein n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WTI5_9PLAN) HSP 1 Score: 380 bits (976), Expect = 2.030e-124 Identity = 203/236 (86.02%), Postives = 220/236 (93.22%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWGFWGVGLLLPFMLHPLSLELSASL 708 LIPLSALFSALCL+ ATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYS+MP+VGVALLLKGMLLS+VNAG LYVYAIPVLV+SIGYSLLALWWAIDQFQREDVLFREAERFELGLWL+HL++TKD+LPSFAEAGFCFVIIMLLQF VMN+M AI +A E+ R +R MQLLMIQQLAIIATPALIMGIMLTTSVRKTFRL+ PS GF VG+ LPF+LHPLSLEL+ SL Sbjct: 379 LIPLSALFSALCLAFATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSLMPVVGVALLLKGMLLSSVNAGILYVYAIPVLVTSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLRHLLKTKDSLPSFAEAGFCFVIIMLLQFGVMNSMSAAIQSATEAERPLRMMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLYLPSLGFLAVGISLPFILHPLSLELAVSL 614
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A6C9N2_9PLAN (Probable sodium extrusion protein NatB n=12 Tax=Planctomycetaceae TaxID=126 RepID=A6C9N2_9PLAN) HSP 1 Score: 377 bits (968), Expect = 3.770e-123 Identity = 202/236 (85.59%), Postives = 215/236 (91.10%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWGFWGVGLLLPFMLHPLSLELSASL 708 LIPLS LFSALCLSLATFARSSKEGQYYLTPLLMVT+GLTVFCLSPAVEIN FYS+MP+VGVALLLK MLLS VNAG LYVYAIPVLV+SIGYSLLALWWAIDQFQREDVLFREAERFE+GLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAI A + R R MQLLMIQQLAIIATPAL+MGIMLTTS+RKTFRL+ P +GFW V ++L F LHPLS EL +SL Sbjct: 385 LIPLSGLFSALCLSLATFARSSKEGQYYLTPLLMVTIGLTVFCLSPAVEINPFYSLMPVVGVALLLKAMLLSTVNAGILYVYAIPVLVTSIGYSLLALWWAIDQFQREDVLFREAERFEVGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAIQMATSAERPTRMMQLLMIQQLAIIATPALMMGIMLTTSMRKTFRLYLPRFGFWIVAIVLAFALHPLSQELVSSL 620
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A0A2D6SWX8_9PLAN (CPBP family intramembrane metalloprotease domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SWX8_9PLAN) HSP 1 Score: 303 bits (777), Expect = 1.560e-94 Identity = 158/236 (66.95%), Postives = 193/236 (81.78%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWGFWGVGLLLPFMLHPLSLELSASL 708 L+PL+ FSALCL+LATFARS+KEGQYYLTPLLMVTLGLTVFCLSPAVEI FYS+MP+VG+ALLLKGMLLS+ + +LY+YAIPVL++S+GYSLLALWWAI+QF+REDVLFREAERFELGLW++HL+R K++ PSF E GFCFV++MLLQF M M D I +P R +++LM+QQL IIA+PAL MG+MLTTS+ +T +L P +G LPF LHPLSLE+ A L Sbjct: 428 LVPLAGFFSALCLALATFARSTKEGQYYLTPLLMVTLGLTVFCLSPAVEITPFYSVMPVVGIALLLKGMLLSSGGSTSLYLYAIPVLITSVGYSLLALWWAIEQFKREDVLFREAERFELGLWVRHLLRDKESTPSFTEGGFCFVMVMLLQFVFMKYMGDTIANSPAGARGSVMLKMLMVQQLVIIASPALFMGMMLTTSLVRTLQLRMPKIRHLLLGAALPFALHPLSLEMLAKL 663
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A0A3C0AIE4_9PLAN (CPBP family intramembrane metalloprotease domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AIE4_9PLAN) HSP 1 Score: 296 bits (757), Expect = 1.710e-94 Identity = 153/170 (90.00%), Postives = 161/170 (94.71%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMR 510 LIPL+ALFSALCLSLATFARSSKEGQYYLTPLLMVT+GLTVFCLSPAVEIN FYS+MP+VGVALLLKGMLLS VNAG LYVYAIPVL++SIGYSLLALWWAIDQFQREDVLFREAERFE+GLWLKHLMRTKD LPSFAEAGFCFVIIMLLQFAVMNTMRDAI A + R Sbjct: 377 LIPLAALFSALCLSLATFARSSKEGQYYLTPLLMVTIGLTVFCLSPAVEINPFYSLMPVVGVALLLKGMLLSTVNAGILYVYAIPVLITSIGYSLLALWWAIDQFQREDVLFREAERFEVGLWLKHLMRTKDLLPSFAEAGFCFVIIMLLQFAVMNTMRDAIQMATTAER 546
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: UPI00198BA011 (CPBP family intramembrane metalloprotease n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI00198BA011) HSP 1 Score: 303 bits (775), Expect = 2.950e-94 Identity = 162/238 (68.07%), Postives = 199/238 (83.61%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWG--FWGVGLLLPFMLHPLSLELSASL 708 L+PL++LFSALCL+LATFA+SSKEGQYYLTPLLMVT+GLTVFC SPAVEI FYS+MP++G ALLLKG+L + + +YVYAIPVL++SIGYSLLALWWAI+QF E+VLFREAERF+L LW+KHL+R K+ PSFAEAGFCFV+I+LLQF M M+ A+ A + RA+ SMQLLMIQQ+A+IATPAL+MG+MLTTS+R+TF L +P +G W V LLPF LHPL++EL SL Sbjct: 403 LLPLASLFSALCLALATFAKSSKEGQYYLTPLLMVTMGLTVFCASPAVEIEPFYSVMPVMGPALLLKGLLKATGPSTEIYVYAIPVLLTSIGYSLLALWWAIEQFASEEVLFREAERFDLRLWVKHLLRDKELTPSFAEAGFCFVLILLLQFLSMKAMQTAMAGAKDDNRALLSMQLLMIQQIALIATPALMMGVMLTTSLRRTFSLRWPGYGRLMWAV--LLPFALHPLTVELQMSL 638
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A0A3L7PGC2_9BACT (CPBP family intramembrane metalloprotease (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PGC2_9BACT) HSP 1 Score: 293 bits (749), Expect = 6.730e-91 Identity = 154/236 (65.25%), Postives = 193/236 (81.78%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWGFWGVGLLLPFMLHPLSLELSASL 708 L+PL++LFSALCL+LATFA+SSKEGQYYLTPLLMVT+GLTVFC SPA EI FYS++P++G ALLLKG+L + + +Y Y IPVLV+SIGYSLLALWWAIDQF E+VLFREAERF+L LW+KHL+R K+ P+FAE GFCF++I+LLQFA M +M+ A++ A R + +MQLL+IQQ+A+IATPAL+MG+MLTTSVR+TF L +P G LLPF LHPL++EL SL Sbjct: 385 LLPLASLFSALCLALATFAKSSKEGQYYLTPLLMVTMGLTVFCSSPASEIEPFYSVLPVMGPALLLKGLLKATGPSRDIYFYVIPVLVTSIGYSLLALWWAIDQFGSEEVLFREAERFDLRLWVKHLLRDKEPTPTFAEGGFCFLLILLLQFATMKSMQSAMVGASPESRGLLTMQLLVIQQIALIATPALMMGVMLTTSVRRTFSLRWPGTGRLAWAALLPFALHPLTVELQMSL 620
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Match: A0A7C4LN82_9PLAN (CPBP family intramembrane metalloprotease n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4LN82_9PLAN) HSP 1 Score: 289 bits (740), Expect = 1.800e-89 Identity = 152/231 (65.80%), Postives = 188/231 (81.39%), Query Frame = 1 Query: 1 LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEINAFYSMMPIVGVALLLKGMLLSAVNAGALYVYAIPVLVSSIGYSLLALWWAIDQFQREDVLFREAERFELGLWLKHLMRTKDALPSFAEAGFCFVIIMLLQFAVMNTMRDAILTAPESMRAVRSMQLLMIQQLAIIATPALIMGIMLTTSVRKTFRLFFPSWGFWGVGLLLPFMLHPLSLE 693 L+PL+ALFSALCL+ A FARS+KEGQYYLTPLLMVTLGLT+FCLSPAVE+ FYS++PI+G ALLLKG+LL+ AG LY+YA+PVL++S+GYSLLALWWAIDQF EDVLFR AERFE+ LWL+HL+R K+ PSFAEA FCFV+IMLLQFA + M+ + A + R++ +QLL+IQQL IATPA++MG+MLTTSVR+TF+L +P W + L LHPLSLE Sbjct: 368 LLPLAALFSALCLAFAMFARSTKEGQYYLTPLLMVTLGLTMFCLSPAVEMQPFYSVVPIMGPALLLKGLLLANHQAGELYLYAVPVLIASLGYSLLALWWAIDQFGSEDVLFRAAERFEVRLWLRHLLRHKEPTPSFAEALFCFVLIMLLQFAALKAMQTPLRQAAAADRSLLMLQLLIIQQLVFIATPAMLMGVMLTTSVRETFQLRWPEWRHLAAAVCLAAALHPLSLE 598 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97220.22392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97220.22392.1 >prot_M-pyrifera_M_contig97220.22392.1 ID=prot_M-pyrifera_M_contig97220.22392.1|Name=mRNA_M-pyrifera_M_contig97220.22392.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp LIPLSALFSALCLSLATFARSSKEGQYYLTPLLMVTLGLTVFCLSPAVEIback to top mRNA from alignment at M-pyrifera_M_contig97220:3..710- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97220.22392.1 ID=mRNA_M-pyrifera_M_contig97220.22392.1|Name=mRNA_M-pyrifera_M_contig97220.22392.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig97220:3..710- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97220:3..710- >mRNA_M-pyrifera_M_contig97220.22392.1 ID=mRNA_M-pyrifera_M_contig97220.22392.1|Name=mRNA_M-pyrifera_M_contig97220.22392.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig97220:3..710- (Macrocystis pyrifera P11B4 male)back to top |