mRNA_M-pyrifera_M_contig97211.22388.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97211.22388.1
Unique NamemRNA_M-pyrifera_M_contig97211.22388.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: ARP3_DICDI (Actin-related protein 3 n=3 Tax=Dictyosteliaceae TaxID=2058185 RepID=ARP3_DICDI)

HSP 1 Score: 167 bits (423), Expect = 7.830e-48
Identity = 80/123 (65.04%), Postives = 94/123 (76.42%), Query Frame = 1 
Query:    4 SNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            S L AVVIDNGTGYTKMGYAGN +P++IIP+ IA +  K              ++ S K   K ++DLDFFIGDEAIANSKTY M NP+KHGQ+E+WTHMEQ+WEHC+FKYLRCEPEDHYFLL
Sbjct:    5 SGLPAVVIDNGTGYTKMGYAGNNDPSFIIPTTIATQSSKGKQ-----------TAASQK---KGVEDLDFFIGDEAIANSKTYDMTNPVKHGQIENWTHMEQYWEHCVFKYLRCEPEDHYFLL 113
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: F4PRV3_CAVFA (Actin-like protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PRV3_CAVFA)

HSP 1 Score: 162 bits (411), Expect = 4.700e-46
Identity = 79/124 (63.71%), Postives = 93/124 (75.00%), Query Frame = 1 
Query:    1 MSNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            +S L AVVIDNGTGYTKMGYAGN +P++IIPS IA  E K              ++ S K   K ++DLDFFIGDEA AN KTY + NPI+HGQ+++WTHMEQ+WEHCIFKYLRCEPEDHYFLL
Sbjct:    3 LSGLPAVVIDNGTGYTKMGYAGNDDPSFIIPSTIATHESKGKQ-----------TAASMK---KGVEDLDFFIGDEAKANEKTYDINNPIRHGQIQNWTHMEQYWEHCIFKYLRCEPEDHYFLL 112
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: D3BDI4_POLPP (Actin-like protein n=3 Tax=Acytosteliaceae TaxID=2058183 RepID=D3BDI4_POLPP)

HSP 1 Score: 161 bits (407), Expect = 1.730e-45
Identity = 78/123 (63.41%), Postives = 93/123 (75.61%), Query Frame = 1 
Query:    4 SNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            S L AVVIDNGTGYTKMGYAGN +P++IIPS IA +  K              ++ S K   K ++DLDFFIGDEA+ANSKTY + NPI+HGQ+++WTHMEQ+WE CIFKYLRCEPEDHYFLL
Sbjct:    3 SGLPAVVIDNGTGYTKMGYAGNDDPSFIIPSTIATQSSKGKQ-----------TAASMK---KGVEDLDFFIGDEAVANSKTYDITNPIRHGQIQNWTHMEQYWEQCIFKYLRCEPEDHYFLL 111
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: ARP3_ACACA (Actin-related protein 3 n=2 Tax=Acanthamoeba castellanii TaxID=5755 RepID=ARP3_ACACA)

HSP 1 Score: 157 bits (398), Expect = 4.700e-44
Identity = 78/123 (63.41%), Postives = 86/123 (69.92%), Query Frame = 1 
Query:    4 SNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            S L AVVIDNGTGYTKMGYAGN EP YIIP+ IA K                 ++G N      I DLDFFIGDEA  NSK Y +  P++HGQVE+WTHMEQFWEHCIFKYLRCEPEDH+FLL
Sbjct:    4 SGLPAVVIDNGTGYTKMGYAGNTEPQYIIPTAIATKGIAEDPRCRARRWWCPWAAGKN------IADLDFFIGDEAYENSKVYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLL 120
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: A0A151ZS89_9MYCE (Actin-like protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZS89_9MYCE)

HSP 1 Score: 155 bits (392), Expect = 8.160e-43
Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = 1 
Query:    1 MSNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            +S L AV+IDNGTGYTKMG+AGN +PN+IIP+ IA +  K              ++ S K   K ++DLDFFIGDEAIANSKTY +  PI+HGQ+++WT MEQ+WE CIFKYLRCEPEDHYFLL
Sbjct:    4 VSGLPAVIIDNGTGYTKMGFAGNNDPNFIIPTAIATQTSKGKQ-----------TAASQK---KGVEDLDFFIGDEAIANSKTYDLNYPIRHGQIDNWTFMEQYWEQCIFKYLRCEPEDHYFLL 113
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: A0A2P6N340_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N340_9EUKA)

HSP 1 Score: 153 bits (386), Expect = 2.330e-42
Identity = 76/123 (61.79%), Postives = 86/123 (69.92%), Query Frame = 1 
Query:    4 SNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            S L AVVIDNGTGYTKMGYAGN EP YI P+ I  +E K              ++   KG     +DLDF+IGDEA+ANSKTY    P++HGQVE+WTHME FWE CIFKYLRCEPEDHYFLL
Sbjct:    4 SGLPAVVIDNGTGYTKMGYAGNVEPQYITPTTICTQEGKGAQK----------AAAQKKGA----EDLDFYIGDEALANSKTYDTFYPVRHGQVENWTHMEYFWEQCIFKYLRCEPEDHYFLL 112
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: A0A075ASC3_ROZAC (Actin-related protein 3 n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075ASC3_ROZAC)

HSP 1 Score: 151 bits (381), Expect = 7.680e-42
Identity = 73/124 (58.87%), Postives = 91/124 (73.39%), Query Frame = 1 
Query:    1 MSNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            M+ LS VVIDNGTGYTK+G+AGN +P +IIPS IAVKE                ++ S   T K I+DLDF+IGDEA AN KTYS++ P++HGQ+E+W  ME++WE C+FKYLRCEPEDHYFLL
Sbjct:    1 MTKLSPVVIDNGTGYTKLGFAGNSDPQFIIPSAIAVKE----------------TATSINRTRKGIEDLDFYIGDEAFANQKTYSLQYPVRHGQIENWDLMERYWEKCLFKYLRCEPEDHYFLL 108
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: A0A2A6C9G7_PRIPA (Uncharacterized protein n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A2A6C9G7_PRIPA)

HSP 1 Score: 142 bits (357), Expect = 2.430e-41
Identity = 77/126 (61.11%), Postives = 86/126 (68.25%), Query Frame = 1 
Query:    1 MSNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIA-NSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLLV 375
            +  L A VIDNGTGYTK+GYA N EP +IIPS IAVK+K A              SGS   T+  IDDLDFFIGDEA A  +  YS+K PI+HG VE W  ME+FWE CIFKYLR EPEDHYFLLV
Sbjct:    3 LGRLPACVIDNGTGYTKLGYAANSEPQFIIPSAIAVKDKGASSHSSALR------SGS---TVGKIDDLDFFIGDEAFAPTAANYSVKYPIRHGIVEDWDLMERFWEQCIFKYLRAEPEDHYFLLV 119
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: A0A0L0FWY9_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FWY9_9EUKA)

HSP 1 Score: 142 bits (358), Expect = 5.630e-41
Identity = 73/121 (60.33%), Postives = 84/121 (69.42%), Query Frame = 1 
Query:   10 LSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            + A VIDNGTGYTKMGYAGN  P+YI+PS IAVKE K                G++K   K I+DLDF IGDEAIAN KTYS   PI+HG VE+W  ME++WE  IFKY+R EPEDHYFLL
Sbjct:    5 MPACVIDNGTGYTKMGYAGNSVPSYIVPSCIAVKENKV-------------GGGASKLVGKGIEDLDFHIGDEAIANQKTYSAHYPIRHGIVENWDLMERYWEQAIFKYMRAEPEDHYFLL 112
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BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Match: A0A433PZE1_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PZE1_9FUNG)

HSP 1 Score: 149 bits (377), Expect = 6.270e-41
Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 1 
Query:    1 MSNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAXXXXXXXXXXXXXSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTHMEQFWEHCIFKYLRCEPEDHYFLL 372
            MS L  V++DNGTGYTK+GY+GN EP+++ P+ IA +E  +                SN  + + I+DLDFFIG+EAI NSKTY++  PI+HGQ+E+W HME+FWE  IFKYLRCEPEDHYF+L
Sbjct:    1 MSRLPPVIMDNGTGYTKLGYSGNNEPSFVFPTAIATRETHSSTGGGSSLPSKPSFLSSNLASKRGIEDLDFFIGEEAIQNSKTYTLNYPIRHGQIENWDHMERFWEQSIFKYLRCEPEDHYFVL 124
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97211.22388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ARP3_DICDI7.830e-4865.04Actin-related protein 3 n=3 Tax=Dictyosteliaceae T... [more]
F4PRV3_CAVFA4.700e-4663.71Actin-like protein n=1 Tax=Cavenderia fasciculata ... [more]
D3BDI4_POLPP1.730e-4563.41Actin-like protein n=3 Tax=Acytosteliaceae TaxID=2... [more]
ARP3_ACACA4.700e-4463.41Actin-related protein 3 n=2 Tax=Acanthamoeba caste... [more]
A0A151ZS89_9MYCE8.160e-4360.48Actin-like protein n=1 Tax=Tieghemostelium lacteum... [more]
A0A2P6N340_9EUKA2.330e-4261.79Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A075ASC3_ROZAC7.680e-4258.87Actin-related protein 3 n=2 Tax=Rozella allomycis ... [more]
A0A2A6C9G7_PRIPA2.430e-4161.11Uncharacterized protein n=2 Tax=Pristionchus pacif... [more]
A0A0L0FWY9_9EUKA5.630e-4160.33Uncharacterized protein (Fragment) n=1 Tax=Sphaero... [more]
A0A433PZE1_9FUNG6.270e-4154.84Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97211contigM-pyrifera_M_contig97211:153..615 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score168.3
Seed ortholog evalue2.3e-39
Seed eggNOG ortholog44689.DDB0219936
Preferred nameACTR3
KEGG koko:K14398,ko:K18584
KEGG Pathwayko03015,ko04138,ko04530,map03015,map04138,map04530
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000139,GO:0000166,GO:0000278,GO:0000280,GO:0000281,GO:0000768,GO:0000902,GO:0000904,GO:0000910,GO:0000912,GO:0000915,GO:0001558,GO:0001667,GO:0001700,GO:0001726,GO:0001891,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002102,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003006,GO:0003674,GO:0003779,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005794,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005886,GO:0005903,GO:0005911,GO:0005912,GO:0005913,GO:0005938,GO:0006810,GO:0006886,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006949,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007005,GO:0007009,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0007049,GO:0007059,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007369,GO:0007399,GO:0007413,GO:0007417,GO:0007423,GO:0007520,GO:0008037,GO:0008038,GO:0008064,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008154,GO:0008356,GO:0008361,GO:0008582,GO:0008593,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009825,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010001,GO:0010026,GO:0010033,GO:0010035,GO:0010038,GO:0010090,GO:0010243,GO:0010256,GO:0010591,GO:0010592,GO:0010631,GO:0010638,GO:0010646,GO:0010647,GO:0010720,GO:0010721,GO:0010762,GO:0010763,GO:0010769,GO:0010770,GO:0010771,GO:0010975,GO:0010976,GO:0010977,GO:0012505,GO:0012506,GO:0014013,GO:0014015,GO:0014070,GO:0014902,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016331,GO:0016344,GO:0016477,GO:0017076,GO:0019899,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022416,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030037,GO:0030041,GO:0030054,GO:0030055,GO:0030056,GO:0030139,GO:0030154,GO:0030175,GO:0030182,GO:0030308,GO:0030334,GO:0030335,GO:0030479,GO:0030516,GO:0030517,GO:0030554,GO:0030588,GO:0030589,GO:0030659,GO:0030666,GO:0030670,GO:0030707,GO:0030713,GO:0030832,GO:0030833,GO:0030838,GO:0030855,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031143,GO:0031175,GO:0031252,GO:0031334,GO:0031344,GO:0031345,GO:0031346,GO:0031410,GO:0031532,GO:0031982,GO:0031984,GO:0032092,GO:0032153,GO:0032195,GO:0032271,GO:0032273,GO:0032355,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033206,GO:0033993,GO:0034097,GO:0034314,GO:0034341,GO:0034612,GO:0034613,GO:0034622,GO:0035639,GO:0035983,GO:0035984,GO:0036094,GO:0036284,GO:0038093,GO:0038094,GO:0038096,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042063,GO:0042221,GO:0042493,GO:0042692,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043393,GO:0043519,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0044837,GO:0045010,GO:0045087,GO:0045132,GO:0045184,GO:0045202,GO:0045335,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045685,GO:0045687,GO:0045747,GO:0045887,GO:0045926,GO:0045927,GO:0046677,GO:0046683,GO:0046689,GO:0046903,GO:0046907,GO:0048013,GO:0048232,GO:0048285,GO:0048308,GO:0048311,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048640,GO:0048646,GO:0048666,GO:0048699,GO:0048708,GO:0048710,GO:0048711,GO:0048729,GO:0048731,GO:0048771,GO:0048814,GO:0048856,GO:0048869,GO:0048870,GO:0050000,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050771,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051117,GO:0051128,GO:0051129,GO:0051130,GO:0051146,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051258,GO:0051270,GO:0051272,GO:0051285,GO:0051286,GO:0051301,GO:0051303,GO:0051305,GO:0051321,GO:0051489,GO:0051491,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051653,GO:0051656,GO:0051666,GO:0051674,GO:0051704,GO:0051716,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051965,GO:0060076,GO:0060187,GO:0060271,GO:0060284,GO:0060341,GO:0060429,GO:0060491,GO:0060998,GO:0060999,GO:0061001,GO:0061003,GO:0061024,GO:0061061,GO:0061387,GO:0061476,GO:0061564,GO:0061640,GO:0061645,GO:0061825,GO:0061827,GO:0061828,GO:0061830,GO:0061831,GO:0061832,GO:0061843,GO:0061851,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070161,GO:0070201,GO:0070358,GO:0070555,GO:0070727,GO:0070848,GO:0070849,GO:0070887,GO:0070925,GO:0071236,GO:0071310,GO:0071345,GO:0071346,GO:0071347,GO:0071356,GO:0071363,GO:0071364,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071503,GO:0071559,GO:0071560,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072553,GO:0090066,GO:0090087,GO:0090130,GO:0090132,GO:0090313,GO:0090314,GO:0090316,GO:0090527,GO:0090558,GO:0090626,GO:0097159,GO:0097203,GO:0097223,GO:0097320,GO:0097367,GO:0097435,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0098805,GO:0098813,GO:0098858,GO:0098862,GO:0099080,GO:0099081,GO:0099172,GO:0099175,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0106030,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120033,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:0140013,GO:1900006,GO:1901265,GO:1901363,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902407,GO:1902410,GO:1902743,GO:1902745,GO:1902903,GO:1902905,GO:1903046,GO:1903047,GO:1903076,GO:1903078,GO:1903475,GO:1903533,GO:1903827,GO:1903829,GO:1904170,GO:1904171,GO:1904375,GO:1904377,GO:1904396,GO:1904398,GO:1904951,GO:1905475,GO:1905477,GO:1905834,GO:1905835,GO:1905836,GO:1905837,GO:2000026,GO:2000145,GO:2000147,GO:2000249,GO:2000251
EggNOG free text desc.Belongs to the actin family
EggNOG OGs3X8DS@554915,COG5277@1,KOG0678@2759
COG Functional cat.Z
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04131,ko04147,ko04812
Exons2
Model size375
Cds size375
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816888.5776455-CDS-M-pyrifera_M_contig97211:152..1931622816888.5776455-CDS-M-pyrifera_M_contig97211:152..193Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97211 153..193 +
1692278237.8863103-CDS-M-pyrifera_M_contig97211:152..1931692278237.8863103-CDS-M-pyrifera_M_contig97211:152..193Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97211 153..193 +
1622816888.5914555-CDS-M-pyrifera_M_contig97211:281..6151622816888.5914555-CDS-M-pyrifera_M_contig97211:281..615Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97211 282..615 +
1692278237.9004776-CDS-M-pyrifera_M_contig97211:281..6151692278237.9004776-CDS-M-pyrifera_M_contig97211:281..615Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97211 282..615 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97211.22388.1prot_M-pyrifera_M_contig97211.22388.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97211 153..615 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97211.22388.1

>prot_M-pyrifera_M_contig97211.22388.1 ID=prot_M-pyrifera_M_contig97211.22388.1|Name=mRNA_M-pyrifera_M_contig97211.22388.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MSNLSAVVIDNGTGYTKMGYAGNCEPNYIIPSQIAVKEKKAAASGGGAKF
GGASSSGSNKGTIKTIDDLDFFIGDEAIANSKTYSMKNPIKHGQVESWTH
MEQFWEHCIFKYLRCEPEDHYFLLV
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mRNA from alignment at M-pyrifera_M_contig97211:153..615+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97211.22388.1 ID=mRNA_M-pyrifera_M_contig97211.22388.1|Name=mRNA_M-pyrifera_M_contig97211.22388.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=463bp|location=Sequence derived from alignment at M-pyrifera_M_contig97211:153..615+ (Macrocystis pyrifera P11B4 male)
ATGTCGAACCTCAGCGCTGTTGTCATCGACAATGGTACCGGGTGCGTCGC
TACGCTCCTTGGCCTCTCCTGCCGGGCACACAGCTGCCAGTAAGCGACAG
CGGGCTGACACGGCTTCCCCCCTCTACAGATACACCAAGATGGGCTATGC
AGGCAACTGCGAGCCGAACTACATCATCCCGAGCCAGATCGCCGTGAAGG
AGAAGAAGGCCGCTGCCTCTGGCGGTGGTGCCAAGTTTGGTGGTGCCTCT
TCGTCTGGATCCAACAAGGGAACCATCAAGACCATTGACGACCTTGATTT
CTTCATTGGAGACGAGGCGATTGCCAACTCGAAGACCTACTCCATGAAGA
ACCCCATCAAGCACGGACAGGTCGAGAGCTGGACCCACATGGAGCAGTTC
TGGGAGCACTGCATCTTCAAGTACCTCCGCTGTGAGCCTGAGGACCACTA
CTTCCTCCTGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97211:153..615+

>mRNA_M-pyrifera_M_contig97211.22388.1 ID=mRNA_M-pyrifera_M_contig97211.22388.1|Name=mRNA_M-pyrifera_M_contig97211.22388.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig97211:153..615+ (Macrocystis pyrifera P11B4 male)
ATGTCGAACCTCAGCGCTGTTGTCATCGACAATGGTACCGGATGTCGAAC
CTCAGCGCTGTTGTCATCGACAATGGTACCGGATACACCAAGATGGGCTA
TGCAGGCAACTGCGAGCCGAACTACATCATCCCGAGCCAGATCGCCGTGA
AGGAGAAGAAGGCCGCTGCCTCTGGCGGTGGTGCCAAGTTTGGTGGTGCC
TCTTCGTCTGGATCCAACAAGGGAACCATCAAGACCATTGACGACCTTGA
TTTCTTCATTGGAGACGAGGCGATTGCCAACTCGAAGACCTACTCCATGA
AGAACCCCATCAAGCACGGACAGGTCGAGAGCTGGACCCACATGGAGCAG
TTCTGGGAGCACTGCATCTTCAAGTACCTCCGCTGTGAGCCTGAGGACCA
CTACTTCCTCCTGGTGATACACCAAGATGGGCTATGCAGGCAACTGCGAG
CCGAACTACATCATCCCGAGCCAGATCGCCGTGAAGGAGAAGAAGGCCGC
TGCCTCTGGCGGTGGTGCCAAGTTTGGTGGTGCCTCTTCGTCTGGATCCA
ACAAGGGAACCATCAAGACCATTGACGACCTTGATTTCTTCATTGGAGAC
GAGGCGATTGCCAACTCGAAGACCTACTCCATGAAGAACCCCATCAAGCA
CGGACAGGTCGAGAGCTGGACCCACATGGAGCAGTTCTGGGAGCACTGCA
TCTTCAAGTACCTCCGCTGTGAGCCTGAGGACCACTACTTCCTCCTGGTG
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