mRNA_M-pyrifera_M_contig96182.22166.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A521RF85_9GAMM (Histone deacetylase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RF85_9GAMM) HSP 1 Score: 303 bits (775), Expect = 1.090e-100 Identity = 138/203 (67.98%), Postives = 165/203 (81.28%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAELKRAAD 609 I+NGFAL+RPPGHHAE + ALGFCLFNNVAILARYLQR +G DK+ I+DWDVHHGNGTQHTFE DPSVLY+STHQYPYYPGTGA SE G GRGKG +NCP+ A S D YE+AF E+IIPA+ A+ PE I+ISAGFDAHRDDPL ++ L+T + WM+ERV+E+AD+ GR++S+LEGGYNL L C+ HL +L AD Sbjct: 116 INNGFALIRPPGHHAERDMALGFCLFNNVAILARYLQRHYGLDKLVILDWDVHHGNGTQHTFEEDPSVLYISTHQYPYYPGTGAYSETGIGRGKGATLNCPLPAHSGDVEYEMAFREKIIPAIHAFRPECIIISAGFDAHRDDPLGQMHLTTGFYGWMTERVVELADYSCAGRIISVLEGGYNLQALPRCIEQHLTKLAGIAD 318
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A1G0K152_9GAMM (Hist_deacetyl domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K152_9GAMM) HSP 1 Score: 301 bits (771), Expect = 4.140e-100 Identity = 136/198 (68.69%), Postives = 165/198 (83.33%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAEL 594 + NGFAL+RPPGHHAE + ALGFCLFNNVAILAR+LQ+ HG +K+ I+DWDVHHGNGTQHTFE DPSVLYVSTHQYP+YPGTGA E G GRGKG +NCPM AGS + YE AFM+ I+P + A+ P+ +++SAGFDAHRDDP+A+I+LSTA + WM+ER+LE AD AGGR++S+LEGGYNL RL +CVA HL L Sbjct: 113 LRNGFALLRPPGHHAEKDMALGFCLFNNVAILARHLQKHHGLEKVLILDWDVHHGNGTQHTFEDDPSVLYVSTHQYPFYPGTGAWYEDGVGRGKGATLNCPMAAGSGNHDYEQAFMDHILPRINAFRPQFVILSAGFDAHRDDPMAQIELSTAFYGWMTERMLESADQHAGGRIVSVLEGGYNLQRLPECVAVHLQSL 310
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A1G0G8Y2_9GAMM (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G8Y2_9GAMM) HSP 1 Score: 297 bits (761), Expect = 6.230e-100 Identity = 140/204 (68.63%), Postives = 162/204 (79.41%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAELKRAADA 612 IHNGFAL+RPPGHHAE++ ALGFCLFNNVAILARYLQ QHG DKI I+DWDVHHGNGTQH FE PSVLY+S HQYP+YPGTGA +E G GRG G +NCPM AGSTD+ YE AFM RI+P ++A+ PE IL+SAGFDAH+ DPLA+I LST F WM+ER++E A H GR+LSLLEGGYNL L C+ HL L A +A Sbjct: 23 IHNGFALLRPPGHHAENSRALGFCLFNNVAILARYLQLQHGLDKILILDWDVHHGNGTQHIFEEYPSVLYISIHQYPFYPGTGAYTETGIGRGAGATLNCPMPAGSTDTDYEHAFMARILPKIDAFKPEAILVSAGFDAHKSDPLAQICLSTEFFGWMTERLMEKAAHHCEGRILSLLEGGYNLEMLPRCIGTHLRVLSGAGNA 226
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A2E8YAS7_9GAMM (Histone deacetylase n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E8YAS7_9GAMM) HSP 1 Score: 300 bits (768), Expect = 1.530e-99 Identity = 138/198 (69.70%), Postives = 161/198 (81.31%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAEL 594 I NGFAL+RPPGHHAE ++ALGFCLFNNVA+LARYLQ+ HG K+ IVDWDVHHGNGTQHTFE DPSVLY+STHQYPYYPGTGA E GEGRG GT +NCPM AG+TD YE AF E+I+P ++ + PEV+LISAGFDAHR DPLA++ LST + WM+ R+LE AD AGGRV+SLLEGGY+L L C A H+ L Sbjct: 113 IDNGFALMRPPGHHAETSTALGFCLFNNVAVLARYLQQHHGLSKVLIVDWDVHHGNGTQHTFEQDPSVLYISTHQYPYYPGTGAYFESGEGRGVGTTLNCPMAAGATDQDYERAFREQIMPKIDEFKPEVVLISAGFDAHRSDPLAQVNLSTEMYEWMTLRLLEAADAHAGGRVISLLEGGYDLQALAKCTALHVQTL 310
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A381RZ90_9ZZZZ (Hist_deacetyl domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381RZ90_9ZZZZ) HSP 1 Score: 296 bits (757), Expect = 6.290e-98 Identity = 134/198 (67.68%), Postives = 160/198 (80.81%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAEL 594 + NGFALVRPPGHHAE N+ALGFCLFNNVAI ARYLQRQHG DKI I+DWDVHHGNGTQH FE DPSV Y+S HQYP+YPGTGAASE G GRG G +NCPM AGS+D Y+ AF ++I+P + + PEV+L+SAGFDAH+ DPL I L+T + WM+ER+LEIAD AGGR++S+LEGGY+L L D V+ HL+ L Sbjct: 113 VDNGFALVRPPGHHAEKNTALGFCLFNNVAIAARYLQRQHGLDKILILDWDVHHGNGTQHAFEDDPSVYYISLHQYPHYPGTGAASETGFGRGSGATLNCPMAAGSSDGEYQQAFKQKILPGIHEFRPEVVLVSAGFDAHQADPLGAINLTTGCYGWMTERLLEIADQYAGGRLISMLEGGYDLDALADSVSEHLSTL 310
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A1G1IVY9_9BACT (Hist_deacetyl domain-containing protein n=1 Tax=Omnitrophica bacterium GWA2_52_12 TaxID=1801816 RepID=A0A1G1IVY9_9BACT) HSP 1 Score: 292 bits (748), Expect = 1.200e-96 Identity = 139/200 (69.50%), Postives = 161/200 (80.50%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAELKR 600 I NGFAL+RPPGHHAE + A+GFCLFNNVAILARYLQ+ HG +KIAI+DWDVHHGNGTQH+FE DPSV Y+S HQ+P+YPGTG A+E G GRGKG +NCPMRAG+ D YE AF +I+PALE Y P+ ILISAGFDAHR DPL +I LST + WM+ERVLEIA + GR+LSLLEGGY+LT L CVA HL L R Sbjct: 113 IQNGFALLRPPGHHAERDLAMGFCLFNNVAILARYLQQHHGLEKIAILDWDVHHGNGTQHSFEEDPSVFYISLHQFPFYPGTGRAAENGAGRGKGYTLNCPMRAGAGDWDYEQAFSLQILPALENYKPDAILISAGFDAHRVDPLGQINLSTEFYGWMTERVLEIAARHSRGRILSLLEGGYDLTALPLCVAKHLNMLMR 312
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A1G0JPX9_9GAMM (Hist_deacetyl domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JPX9_9GAMM) HSP 1 Score: 290 bits (743), Expect = 6.460e-96 Identity = 134/198 (67.68%), Postives = 160/198 (80.81%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAEL 594 + NGFAL+RPPGHHAE+ ALGFCLFNNVAILARYLQ+QHG DKI I+DWDVHHGNGTQHTFE DPSVLY+STHQYPYYPGTGA E G GRG+GT +NCPM AGS D YE AF+++I+P ++ + PE+I+ISAGFDAH +DPL I LST + WM+ ++E AD+ A GR++SLLEGGYNL L C+A HL L Sbjct: 113 LDNGFALIRPPGHHAENTMALGFCLFNNVAILARYLQQQHGLDKIMILDWDVHHGNGTQHTFEDDPSVLYISTHQYPYYPGTGAWFETGTGRGEGTTLNCPMAAGSGDLEYEAAFVKKILPKIDQFRPEIIIISAGFDAHVNDPLGNINLSTEFYGWMTRVLMEKADNYAKGRLISLLEGGYNLKMLPRCIAEHLKVL 310
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A1Z8V5Y7_9PROT (Hist_deacetyl domain-containing protein n=6 Tax=Proteobacteria TaxID=1224 RepID=A0A1Z8V5Y7_9PROT) HSP 1 Score: 290 bits (741), Expect = 1.530e-95 Identity = 132/199 (66.33%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAELK 597 + NGFALVRPPGHHAEHN+ALGFCLFNN+AI ARYLQ QHG +KI IVDWDVHHGNGTQH FE DPSV YVSTHQYP+YPGTGA SE G G GKG +NCPM AG+ + Y AF E I+PA++A+ P++ILISAGFDAH+ DPL I L+T ++WM+ R++E ADH GR+LS+LEGGY+L L VA H+ LK Sbjct: 113 VDNGFALVRPPGHHAEHNAALGFCLFNNIAIAARYLQDQHGLEKILIVDWDVHHGNGTQHLFEEDPSVFYVSTHQYPHYPGTGAYSETGTGAGKGATLNCPMNAGAGNETYTQAFTETILPAIDAFGPDMILISAGFDAHQADPLGSINLTTEHYAWMTRRLMECADHHCNGRILSVLEGGYDLDALALSVAVHIGTLK 311
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A1S9D2P8_9GAMM (Histone deacetylase-like amidohydrolase n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9D2P8_9GAMM) HSP 1 Score: 289 bits (739), Expect = 3.980e-95 Identity = 133/198 (67.17%), Postives = 158/198 (79.80%), Query Frame = 1 Query: 1 IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAEL 594 I NGFA++RPPGHHAEH ALGFCLFNNVAILARYLQ+++G DK+ I+DWDVHHGNGTQH+F +DPSV YVS HQYP+YPGTGA +E G G G GT +NCPM AG+TD Y AF + I+P + A+ PE ILISAGFDAHRDDPLAE+ L+T F WMS+R+LE AD A GR+++LLEGGYNL L C+A HL L Sbjct: 113 IENGFAMLRPPGHHAEHAMALGFCLFNNVAILARYLQKRYGIDKVLILDWDVHHGNGTQHSFYTDPSVFYVSLHQYPFYPGTGAWTETGSGAGAGTTLNCPMAAGATDGDYHAAFRKHILPKINAFKPEFILISAGFDAHRDDPLAEVCLTTECFRWMSQRMLEAADQHAEGRLIALLEGGYNLRALPLCIAEHLKVL 310
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Match: A0A3D2VBM2_9GAMM (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D2VBM2_9GAMM) HSP 1 Score: 285 bits (728), Expect = 4.650e-95 Identity = 129/201 (64.18%), Postives = 157/201 (78.11%), Query Frame = 1 Query: 7 NGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWDVHHGNGTQHTFESDPSVLYVSTHQYPYYPGTGAASERGEGRGKGTIVNCPMRAGSTDSAYELAFMERIIPALEAYAPEVILISAGFDAHRDDPLAEIKLSTAAFSWMSERVLEIADHRAGGRVLSLLEGGYNLTRLGDCVAAHLAELKRAAD 609 NGFALVRPPGHHAEHN+ALGFCLFNN+AI ARYLQ QH +KI IVDWDVHHGNGTQH FE DPSV YVSTHQYP+YPGTG+ SE G G GKG +NCPM+AG+ + Y F ++I+PA+E + P++ILISAGFDAH+ DPL I L+T +SWM++R++E AD GR+LS+LEGGY+L L VA+H+ LK D Sbjct: 14 NGFALVRPPGHHAEHNAALGFCLFNNIAIAARYLQNQHDLEKILIVDWDVHHGNGTQHLFEEDPSVFYVSTHQYPHYPGTGSYSETGSGAGKGATLNCPMKAGANNETYTEVFTKKILPAVELFKPDIILISAGFDAHQADPLGGINLTTEYYSWMTQRLMECADRHCSGRILSILEGGYDLDALALSVASHIKTLKHCND 214 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96182.22166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig96182.22166.1 >prot_M-pyrifera_M_contig96182.22166.1 ID=prot_M-pyrifera_M_contig96182.22166.1|Name=mRNA_M-pyrifera_M_contig96182.22166.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=205bp IHNGFALVRPPGHHAEHNSALGFCLFNNVAILARYLQRQHGFDKIAIVDWback to top mRNA from alignment at M-pyrifera_M_contig96182:2..616+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig96182.22166.1 ID=mRNA_M-pyrifera_M_contig96182.22166.1|Name=mRNA_M-pyrifera_M_contig96182.22166.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=615bp|location=Sequence derived from alignment at M-pyrifera_M_contig96182:2..616+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig96182:2..616+ >mRNA_M-pyrifera_M_contig96182.22166.1 ID=mRNA_M-pyrifera_M_contig96182.22166.1|Name=mRNA_M-pyrifera_M_contig96182.22166.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig96182:2..616+ (Macrocystis pyrifera P11B4 male)back to top |