mRNA_M-pyrifera_M_contig96116.22156.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig96116.22156.1
Unique NamemRNA_M-pyrifera_M_contig96116.22156.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A517PTI4_9PLAN (Periplasmic serine endoprotease DegP n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PTI4_9PLAN)

HSP 1 Score: 456 bits (1174), Expect = 6.030e-158
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQRESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQPM 723
            GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQRESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQPM
Sbjct:  181 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQRESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQPM 421          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A517QBA8_9PLAN (Periplasmic serine endoprotease DegP n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QBA8_9PLAN)

HSP 1 Score: 412 bits (1060), Expect = 1.070e-140
Identity = 217/241 (90.04%), Postives = 229/241 (95.02%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQRESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQPM 723
            GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLV+HVF QL+KYGQVYRAYLGVQLDPEFSIGTATRL MDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDV+DQNHLINLVSLTPI+ RVSVVLLR+GR+VNVMVELANRRILDELERKQ+E+QQSSRR G SA+PMSF ++KH S T+ L GL VQ M
Sbjct:  178 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVRHVFNQLVKYGQVYRAYLGVQLDPEFSIGTATRLKMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVMDQNHLINLVSLTPIDQRVSVVLLRNGRRVNVMVELANRRILDELERKQKETQQSSRRIGPSADPMSFQRIKHESKTDALQGLRVQAM 418          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A518IGV3_9PLAN (Periplasmic serine endoprotease DegP n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A518IGV3_9PLAN)

HSP 1 Score: 400 bits (1029), Expect = 5.840e-136
Identity = 213/241 (88.38%), Postives = 226/241 (93.78%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQRESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQPM 723
            GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLV+HVF QL+KYGQVYRAYLGVQLDPEFS+ TA RL MDRVRGARVVKVISNTPASRANLKYDD+ILSFGGIDVLDQNHLINLVSLT I++RVSVVLLR+GRKVNVMVELANR+ILDELERKQ+ESQQSSRRF T AEPMSF KVK++ A + L GL +  M
Sbjct:  180 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVRHVFNQLVKYGQVYRAYLGVQLDPEFSVATAGRLKMDRVRGARVVKVISNTPASRANLKYDDVILSFGGIDVLDQNHLINLVSLTAIDNRVSVVLLRNGRKVNVMVELANRQILDELERKQKESQQSSRRFRTPAEPMSFQKVKYSEAQDILTGLQLYGM 420          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A517VI53_9PLAN (Periplasmic serine endoprotease DegP n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VI53_9PLAN)

HSP 1 Score: 398 bits (1023), Expect = 4.740e-135
Identity = 215/241 (89.21%), Postives = 226/241 (93.78%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQRESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQPM 723
            GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLV+HVF QL+KYGQVYRAYLGVQLDPEFSI TA RL MDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPI++RVSVVLLR GRKVNVMVELANRRILDELERKQ+E+QQS RR GTSA PMSF K+K+ +A + L+GL V  M
Sbjct:  181 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVRHVFNQLVKYGQVYRAYLGVQLDPEFSIATAGRLKMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIDNRVSVVLLRSGRKVNVMVELANRRILDELERKQKETQQS-RRPGTSAAPMSFQKMKNTTANDVLSGLQVHAM 420          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A517VTQ5_9PLAN (Periplasmic serine endoprotease DegP n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VTQ5_9PLAN)

HSP 1 Score: 380 bits (976), Expect = 7.450e-128
Identity = 203/240 (84.58%), Postives = 217/240 (90.42%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQ-RESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQ 717
            GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLV+HVF QL+KYGQVYRAYLGVQLDPEFSI TA RL MDRVRGARVVKVISNTPASRANLKYDDIILSF GIDVLDQNHLINLVSLTPI+ R +VVLLR+GRK+NVMVELANR+ILDELERKQ RES+QSS R G +AEP SF ++K+ +         +Q
Sbjct:  180 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVRHVFNQLVKYGQVYRAYLGVQLDPEFSIATANRLKMDRVRGARVVKVISNTPASRANLKYDDIILSFAGIDVLDQNHLINLVSLTPIDKRANVVLLRNGRKINVMVELANRKILDELERKQKRESEQSSIRIGPTAEPTSFQRIKNDNENHQAVATDLQ 419          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A350KE90_9PLAN (Peptidase S1 (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KE90_9PLAN)

HSP 1 Score: 299 bits (765), Expect = 3.060e-99
Identity = 161/187 (86.10%), Postives = 172/187 (91.98%), Query Frame = 1
Query:  163 IIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQRESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQPM 723
            IIGINTAIASNSGGNDGIGFSIPSKLV+HVF QL+KYGQVYRAYLGVQLDPEFSI TA RL MDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPI++RVSVVLLR GRKVNVMVELANRRILDELERKQ+E+QQS RR GTSA PMSF K+K+ +A + L+GL V  M
Sbjct:    1 IIGINTAIASNSGGNDGIGFSIPSKLVRHVFNQLVKYGQVYRAYLGVQLDPEFSIATAGRLKMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIDNRVSVVLLRSGRKVNVMVELANRRILDELERKQKETQQS-RRPGTSAAPMSFQKIKNTTANDVLSGLQVHAM 186          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: UPI001EE7FDEC (trypsin-like peptidase domain-containing protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE7FDEC)

HSP 1 Score: 259 bits (663), Expect = 3.570e-82
Identity = 132/201 (65.67%), Postives = 168/201 (83.58%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERK 603
            GLS+SVT GIISAKGRRSL+LG  S+V+NQ+FLQTDAAINPGNSGGPLIDL G++IGINTAIASNSGGN+GIGFSIPS LV++V  QL+ +G+V RAYLGV+LDP+F + TA ++ +DRVRGARVV V  NTPASR+ L  DD+IL FGG++VLD+NHLINLVSLT ++  V  ++LR+G++  + V L +R   D+LE++
Sbjct:  182 GLSQSVTFGIISAKGRRSLRLGESSDVINQDFLQTDAAINPGNSGGPLIDLSGRVIGINTAIASNSGGNEGIGFSIPSNLVRYVTEQLISHGKVRRAYLGVKLDPDFDLETAQKMGLDRVRGARVVDVYKNTPASRSGLIIDDVILYFGGVEVLDENHLINLVSLTSVQTSVQAIILRNGKRQTIPVVLGDR---DDLEQR 379          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A517R0M1_9BACT (Periplasmic serine endoprotease DegP n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517R0M1_9BACT)

HSP 1 Score: 258 bits (658), Expect = 1.600e-81
Identity = 132/197 (67.01%), Postives = 164/197 (83.25%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDE 591
            GLS+SVTLGI+SAKGRRSL+LGS S VLN++F+QTDAAINPGNSGGPL+DL G++IGINTAIASNSGGN+GIGFSIPS L + V  QL+ +G+V R++LGV+LDP+F+  TA R N+DRVRGARVV V  NTPA++A L+ DD+IL FG IDV D+NHLINLVSLTP+  R+ + + RDGR + + VELA+R  L E
Sbjct:  186 GLSQSVTLGIVSAKGRRSLELGSDSGVLNKDFIQTDAAINPGNSGGPLVDLRGRVIGINTAIASNSGGNEGIGFSIPSNLARRVVDQLVTHGRVNRSFLGVKLDPDFNPETARRFNLDRVRGARVVLVYDNTPAAKARLQRDDVILRFGEIDVQDENHLINLVSLTPVGKRIDLKVYRDGRMMTLRVELADRASLAE 382          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A5C5XNJ6_9PLAN (Periplasmic serine endoprotease DegP n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A5C5XNJ6_9PLAN)

HSP 1 Score: 255 bits (651), Expect = 2.230e-80
Identity = 132/197 (67.01%), Postives = 161/197 (81.73%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDE 591
            GLS+SVT GIISAKGRRSL+LG  S+V+NQ+FLQTDAAINPGNSGGPLIDL G+IIGINTAIASNSGGN+GIGFSIPS LV++V  QL+  G V RAYLGV+LDP+F   TA +L +DRVRGARVV V  +TPASR+ L  DD+IL FGG++VLD+NHLINLVSLT +   V  ++LR G++  + V L +R +LD+
Sbjct:  181 GLSQSVTFGIISAKGRRSLRLGESSDVINQDFLQTDAAINPGNSGGPLIDLSGRIIGINTAIASNSGGNEGIGFSIPSNLVRYVTEQLVVNGTVKRAYLGVKLDPDFDEETAQKLGLDRVRGARVVDVYKDTPASRSGLMIDDVILYFGGVEVLDENHLINLVSLTSVNTSVKTIVLRKGKRQTLPVVLGDRSVLDQ 377          
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Match: A0A4P5XNV9_9BACT (Serine protease n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A4P5XNV9_9BACT)

HSP 1 Score: 255 bits (652), Expect = 2.980e-80
Identity = 137/223 (61.43%), Postives = 174/223 (78.03%), Query Frame = 1
Query:    1 GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLIDLEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLGVQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGGIDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELERKQRESQQSSRRFGTSAEPMSFHK 669
            GLS+SVT GIISAK RRSL+LG    VLNQ+F+QTDAAINPGNSGGPLIDL G+++GINTAIASNSGGN+GIGFSIPS LV  V  QLL+YG+VYRAYLGV+LDP+F I  A  L +DR RGARV+ +  NTPA+RA L+ DD+ILSF GID+LD+NHLIN+VSL+P+  +V +++LR G K  + V+L++R + ++ +      QQS  +  T  EPM+F K
Sbjct:  169 GLSQSVTFGIISAKSRRSLKLGD-KGVLNQDFIQTDAAINPGNSGGPLIDLNGRVVGINTAIASNSGGNEGIGFSIPSNLVSRVVDQLLEYGKVYRAYLGVKLDPDFDITKARALKLDRARGARVMSIYPNTPAARAKLQKDDVILSFDGIDILDENHLINVVSLSPVGKKVRLMVLRRGEKFPIQVDLSDRSVAED-DSTPAVPQQS--KADTPVEPMNFSK 387          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96116.22156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PTI4_9PLAN6.030e-158100.00Periplasmic serine endoprotease DegP n=6 Tax=Gimes... [more]
A0A517QBA8_9PLAN1.070e-14090.04Periplasmic serine endoprotease DegP n=2 Tax=Gimes... [more]
A0A518IGV3_9PLAN5.840e-13688.38Periplasmic serine endoprotease DegP n=3 Tax=Planc... [more]
A0A517VI53_9PLAN4.740e-13589.21Periplasmic serine endoprotease DegP n=9 Tax=Planc... [more]
A0A517VTQ5_9PLAN7.450e-12884.58Periplasmic serine endoprotease DegP n=2 Tax=Gimes... [more]
A0A350KE90_9PLAN3.060e-9986.10Peptidase S1 (Fragment) n=1 Tax=Planctomycetaceae ... [more]
UPI001EE7FDEC3.570e-8265.67trypsin-like peptidase domain-containing protein n... [more]
A0A517R0M1_9BACT1.600e-8167.01Periplasmic serine endoprotease DegP n=1 Tax=Planc... [more]
A0A5C5XNJ6_9PLAN2.230e-8067.01Periplasmic serine endoprotease DegP n=2 Tax=Planc... [more]
A0A4P5XNV9_9BACT2.980e-8061.43Serine protease n=2 Tax=Planctomycetes TaxID=20368... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96116contigM-pyrifera_M_contig96116:2..724 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score402.1
Seed ortholog evalue1.8e-109
Seed eggNOG ortholog344747.PM8797T_22228
KEGG koko:K04771
KEGG Pathwayko01503,ko02020,map01503,map02020
KEGG ModuleM00728
Hectar predicted targeting categoryother localisation
EggNOG free text desc.typically periplasmic contain C-terminal PDZ domain
EggNOG OGs2IYMV@203682,COG0265@1,COG0265@2
EC3.4.21.107
COG Functional cat.O
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03110
Exons1
Model size723
Cds size723
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816876.4728568-CDS-M-pyrifera_M_contig96116:1..7241622816876.4728568-CDS-M-pyrifera_M_contig96116:1..724Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96116 2..724 +
1692278230.92095-CDS-M-pyrifera_M_contig96116:1..7241692278230.92095-CDS-M-pyrifera_M_contig96116:1..724Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96116 2..724 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96116.22156.1prot_M-pyrifera_M_contig96116.22156.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig96116 2..724 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig96116.22156.1

>prot_M-pyrifera_M_contig96116.22156.1 ID=prot_M-pyrifera_M_contig96116.22156.1|Name=mRNA_M-pyrifera_M_contig96116.22156.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
GLSESVTLGIISAKGRRSLQLGSGSEVLNQNFLQTDAAINPGNSGGPLID
LEGKIIGINTAIASNSGGNDGIGFSIPSKLVQHVFTQLLKYGQVYRAYLG
VQLDPEFSIGTATRLNMDRVRGARVVKVISNTPASRANLKYDDIILSFGG
IDVLDQNHLINLVSLTPIEHRVSVVLLRDGRKVNVMVELANRRILDELER
KQRESQQSSRRFGTSAEPMSFHKVKHASATEDLAGLGVQPM
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mRNA from alignment at M-pyrifera_M_contig96116:2..724+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig96116.22156.1 ID=mRNA_M-pyrifera_M_contig96116.22156.1|Name=mRNA_M-pyrifera_M_contig96116.22156.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig96116:2..724+ (Macrocystis pyrifera P11B4 male)
GGTCTGAGCGAATCGGTGACTCTGGGTATTATCAGCGCCAAAGGACGCCG TTCTCTGCAACTGGGAAGCGGATCAGAGGTACTGAACCAGAACTTCCTGC AGACTGACGCCGCCATCAACCCGGGAAACAGTGGCGGTCCACTGATCGAC CTCGAAGGTAAAATTATCGGGATCAATACTGCAATCGCTTCCAACAGTGG TGGTAACGACGGAATCGGATTCAGTATCCCCAGCAAGCTGGTACAACACG TCTTTACACAGCTCCTGAAGTACGGGCAGGTCTATCGCGCTTACCTGGGT GTCCAGCTCGATCCGGAATTCAGTATCGGGACGGCAACCCGATTGAACAT GGACCGTGTGCGTGGTGCCCGTGTGGTCAAAGTAATTTCTAACACGCCGG CTTCCCGCGCCAACCTGAAATACGATGACATCATTCTCAGTTTCGGCGGT ATTGACGTTCTGGATCAGAACCACCTGATCAACCTGGTCTCCCTGACGCC GATCGAGCATCGTGTGAGTGTCGTTCTGCTGAGAGATGGCCGTAAGGTCA ACGTGATGGTGGAACTGGCGAACCGCCGGATTCTGGACGAACTGGAACGC AAACAGCGCGAATCACAACAGTCATCCCGACGCTTTGGTACCTCTGCTGA GCCGATGAGCTTCCACAAAGTCAAACACGCATCCGCCACAGAGGATCTGG CCGGACTGGGGGTTCAGCCCATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig96116:2..724+

>mRNA_M-pyrifera_M_contig96116.22156.1 ID=mRNA_M-pyrifera_M_contig96116.22156.1|Name=mRNA_M-pyrifera_M_contig96116.22156.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig96116:2..724+ (Macrocystis pyrifera P11B4 male)
GGTCTGAGCGAATCGGTGACTCTGGGTATTATCAGCGCCAAAGGACGCCG
TTCTCTGCAACTGGGAAGCGGATCAGAGGTACTGAACCAGAACTTCCTGC
AGACTGACGCCGCCATCAACCCGGGAAACAGTGGCGGTCCACTGATCGAC
CTCGAAGGTAAAATTATCGGGATCAATACTGCAATCGCTTCCAACAGTGG
TGGTAACGACGGAATCGGATTCAGTATCCCCAGCAAGCTGGTACAACACG
TCTTTACACAGCTCCTGAAGTACGGGCAGGTCTATCGCGCTTACCTGGGT
GTCCAGCTCGATCCGGAATTCAGTATCGGGACGGCAACCCGATTGAACAT
GGACCGTGTGCGTGGTGCCCGTGTGGTCAAAGTAATTTCTAACACGCCGG
CTTCCCGCGCCAACCTGAAATACGATGACATCATTCTCAGTTTCGGCGGT
ATTGACGTTCTGGATCAGAACCACCTGATCAACCTGGTCTCCCTGACGCC
GATCGAGCATCGTGTGAGTGTCGTTCTGCTGAGAGATGGCCGTAAGGTCA
ACGTGATGGTGGAACTGGCGAACCGCCGGATTCTGGACGAACTGGAACGC
AAACAGCGCGAATCACAACAGTCATCCCGACGCTTTGGTACCTCTGCTGA
GCCGATGAGCTTCCACAAAGTCAAACACGCATCCGCCACAGAGGATCTGG
CCGGACTGGGGGTTCAGCCCATGGGTCTGAGCGAATCGGTGACTCTGGGT
ATTATCAGCGCCAAAGGACGCCGTTCTCTGCAACTGGGAAGCGGATCAGA
GGTACTGAACCAGAACTTCCTGCAGACTGACGCCGCCATCAACCCGGGAA
ACAGTGGCGGTCCACTGATCGACCTCGAAGGTAAAATTATCGGGATCAAT
ACTGCAATCGCTTCCAACAGTGGTGGTAACGACGGAATCGGATTCAGTAT
CCCCAGCAAGCTGGTACAACACGTCTTTACACAGCTCCTGAAGTACGGGC
AGGTCTATCGCGCTTACCTGGGTGTCCAGCTCGATCCGGAATTCAGTATC
GGGACGGCAACCCGATTGAACATGGACCGTGTGCGTGGTGCCCGTGTGGT
CAAAGTAATTTCTAACACGCCGGCTTCCCGCGCCAACCTGAAATACGATG
ACATCATTCTCAGTTTCGGCGGTATTGACGTTCTGGATCAGAACCACCTG
ATCAACCTGGTCTCCCTGACGCCGATCGAGCATCGTGTGAGTGTCGTTCT
GCTGAGAGATGGCCGTAAGGTCAACGTGATGGTGGAACTGGCGAACCGCC
GGATTCTGGACGAACTGGAACGCAAACAGCGCGAATCACAACAGTCATCC
CGACGCTTTGGTACCTCTGCTGAGCCGATGAGCTTCCACAAAGTCAAACA
CGCATCCGCCACAGAGGATCTGGCCGGACTGGGGGTTCAGCCCATG
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