mRNA_M-pyrifera_M_contig96106.22152.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig96106.22152.1
Unique NamemRNA_M-pyrifera_M_contig96106.22152.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A7V1I020_9BACT (Acetolactate synthase large subunit n=2 Tax=root TaxID=1 RepID=A0A7V1I020_9BACT)

HSP 1 Score: 384 bits (985), Expect = 8.440e-129
Identity = 186/240 (77.50%), Postives = 214/240 (89.17%), Query Frame = 1
Query:    4 SKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            S I FITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNL+TGVADANMDNAPVVAIAGQA+TTRLHKESHQVLDLV +FKPISKY+AQI EP I+PE+VRKAFKV+Q EKPG SFI FPENIAE+E+ + +PLKVQ P+ P PP EK+ QA K+ISEAKYP++MAGNGV+R KA  +LV FAEK  IPVA+TFMAKG IP SH  SLG+VGLQS+D+VSCGFD+AD++ICVG+D++E
Sbjct:   37 SHIRFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLITGVADANMDNAPVVAIAGQAATTRLHKESHQVLDLVSLFKPISKYSAQIGEPEIVPEVVRKAFKVAQAEKPGCSFISFPENIAEMEVENAVPLKVQSPSPPVPPAEKIDQAVKIISEAKYPIVMAGNGVVRSKASSQLVSFAEKLRIPVASTFMAKGVIPYSHELSLGSVGLQSKDYVSCGFDRADVVICVGYDIVE 276          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A7Z9UQB2_9GAMM (Acetolactate synthase large subunit n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A7Z9UQB2_9GAMM)

HSP 1 Score: 377 bits (967), Expect = 4.430e-126
Identity = 184/241 (76.35%), Postives = 211/241 (87.55%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            DS I+FITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMD+AP++AIAGQAST RLHKESHQVLDLV +F PISKY+ QI+EP IIPE+VRKAFKV++ EKPG SFIDFPENIAE+ I  K PLKVQ  + P PPR+K+ QAA++IS AK+P+IMAGNGVIR  A D LV FAEK NIPVATTFMAKG +P SH  SLG VGLQ+ D++SCGFD+AD+IICVG+D++E
Sbjct:   36 DSPIKFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDHAPIIAIAGQASTNRLHKESHQVLDLVNLFDPISKYSTQILEPEIIPEVVRKAFKVAEAEKPGCSFIDFPENIAEMTIEGKSPLKVQSASPPVPPRDKMEQAAQIISNAKFPIIMAGNGVIRASASDRLVDFAEKLNIPVATTFMAKGVLPCSHELSLGAVGLQANDYISCGFDRADVIICVGYDIVE 276          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A0A6PJG8_9GAMM (Acetolactate synthase n=1 Tax=Candidatus Thiomargarita nelsonii TaxID=1003181 RepID=A0A0A6PJG8_9GAMM)

HSP 1 Score: 377 bits (967), Expect = 4.430e-126
Identity = 184/241 (76.35%), Postives = 214/241 (88.80%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            DS I+FIT RHEQGAAFMADVYGRLTGKAGVCLATLGPGATNL+TGVADANMD AP+VAIAGQASTTRLHKESHQVL+LV +F+PISKY+ QI+ P IIPEIV KAFKV++ EKPG SF+DFPENIA+++++DK PL+V   TAP PP +K+ QAAKLI+EA YP+IMAGNG+IR +A D LV FAEK NIPVATTFMAKG IP SHP  LG+VGLQS+D+VSCGFD+AD+IIC+GFDM+E
Sbjct:   36 DSPIQFITVRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLITGVADANMDKAPLVAIAGQASTTRLHKESHQVLNLVGLFQPISKYSIQILAPEIIPEIVAKAFKVAEAEKPGCSFMDFPENIADMDVSDKAPLRVLRHTAPVPPEKKIRQAAKLINEASYPIIMAGNGIIRDQASDSLVTFAEKLNIPVATTFMAKGVIPFSHPLCLGSVGLQSKDYVSCGFDRADVIICIGFDMVE 276          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A2E3MJA2_9GAMM (Acetolactate synthase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MJA2_9GAMM)

HSP 1 Score: 369 bits (947), Expect = 4.660e-123
Identity = 186/241 (77.18%), Postives = 207/241 (85.89%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            DSKI FITTRHEQGAAFMADV+GRLTG+AGVCLATLGPGATNLVTGVADAN+D APVVAIAGQA+TTRLHKESHQVLDLVEMFKPI+KY+ QII PSII E+VRKAFKV++TEKPG  FIDFPENIAE++I D  PLKVQ  TAP P + KV QA  +I+ A+YPLIMAGNGVIR  A D L  F EK  IPVATTFMAKG +P S+   LGTVGLQ+ D+VSCGFD+AD+IICVGFDMIE
Sbjct:   36 DSKINFITTRHEQGAAFMADVHGRLTGQAGVCLATLGPGATNLVTGVADANLDRAPVVAIAGQAATTRLHKESHQVLDLVEMFKPITKYSTQIIAPSIINEVVRKAFKVAETEKPGACFIDFPENIAEMDITDSAPLKVQSATAPMPSQHKVAQAVDVIASARYPLIMAGNGVIRQHASDNLRAFVEKTKIPVATTFMAKGTVPFSNELCLGTVGLQANDYVSCGFDRADVIICVGFDMIE 276          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: UPI00102CF5C1 (acetolactate synthase large subunit n=1 Tax=Candidatus Magnetaquicoccus inordinatus TaxID=2496818 RepID=UPI00102CF5C1)

HSP 1 Score: 366 bits (939), Expect = 7.300e-122
Identity = 182/241 (75.52%), Postives = 212/241 (87.97%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            +S I+FIT RHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMD APVVAIAGQA+TTRLHKESHQ LDLV +F+PISKY+ Q+++P+ IPEIVRKAFKV+QTEKPG SFIDFPENIAE+ + DK PLKVQ  + P PP EK+ QAA++I++A++P++MAGNGVIR  A   LV FAEK NIPVATTFMAKGAIP SH  +LG VGLQ+ D+VSCGFD+AD+IICVGFD++E
Sbjct:   36 ESPIQFITVRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDRAPVVAIAGQAATTRLHKESHQALDLVNLFRPISKYSIQVLDPNTIPEIVRKAFKVAQTEKPGCSFIDFPENIAEMMV-DKQPLKVQQHSIPAPPIEKIKQAAQIIADAEFPIVMAGNGVIRANACAMLVDFAEKLNIPVATTFMAKGAIPFSHELALGAVGLQAHDYVSCGFDRADVIICVGFDIVE 275          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A2E2THQ0_9GAMM (Acetolactate synthase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2THQ0_9GAMM)

HSP 1 Score: 366 bits (939), Expect = 7.520e-122
Identity = 178/241 (73.86%), Postives = 209/241 (86.72%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            DSKI FITTRHEQGAAFMAD++GRLTG+AGVCLATLGPGATNLVTGVADAN+D AP+VAIAGQA T RLHKESHQVL+LVE+FKPI+KY+ Q++ P  IPEIVRKAFKVSQTEKPG  FID PENIA++++ ++LPLKVQ  T P PP+ K+ QA  +I +AK+P+IMAGNGV+R KA DEL+  AE+  IPVA TFMAKG IP S+P SLGTVGLQ+ D+VSCGFDKAD+IIC+GFDMIE
Sbjct:   36 DSKINFITTRHEQGAAFMADMHGRLTGQAGVCLATLGPGATNLVTGVADANLDRAPLVAIAGQAGTNRLHKESHQVLNLVELFKPITKYSTQVLIPKNIPEIVRKAFKVSQTEKPGACFIDLPENIAQMDVENELPLKVQSATPPYPPKHKLEQAIDIIRQAKFPVIMAGNGVVRAKAHDELIALAERLKIPVANTFMAKGVIPFSNPYSLGTVGLQAHDYVSCGFDKADVIICIGFDMIE 276          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A523PHZ4_9PROT (Acetolactate synthase large subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PHZ4_9PROT)

HSP 1 Score: 366 bits (939), Expect = 7.520e-122
Identity = 176/241 (73.03%), Postives = 209/241 (86.72%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            DS I+FITTRHEQG AFMAD++GRLTGKAGVCLATLGPGATNLVTGVADANMD AP+VAIAGQ +TTRLHK+SHQ+LDLV +FKPISKY+ QI EP IIPEI+RKAFKVSQ EKPG SFID PENIA++ + D+ PL+VQ P+ P PP EK++QAA  IS AKYPL+M GNGVIR  A ++LVKFAEK N+PVATTFMAKG IP SH  SLG VGLQ+ D+++CGF++AD+IIC+G+D++E
Sbjct:   36 DSSIQFITTRHEQGGAFMADLHGRLTGKAGVCLATLGPGATNLVTGVADANMDLAPIVAIAGQGATTRLHKQSHQILDLVNLFKPISKYSTQIREPEIIPEIIRKAFKVSQAEKPGASFIDLPENIAKMNVADEAPLRVQSPSPPIPPEEKISQAANAISAAKYPLVMVGNGVIRAGASEQLVKFAEKLNLPVATTFMAKGVIPFSHNLSLGAVGLQANDYIACGFNRADVIICMGYDIVE 276          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A800ERA0_9BACT (Acetolactate synthase large subunit (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A800ERA0_9BACT)

HSP 1 Score: 359 bits (922), Expect = 2.280e-121
Identity = 180/241 (74.69%), Postives = 204/241 (84.65%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            DSKI FITTRHEQGAAFMADVYGRLTG+AGVCL+TLGPGATNLVTGVADANMD APVVAIAGQA+TTR+HKESHQ LDLV +F PI+KY+ QI EP I+PE+VRKAFK +  EKPG SFIDFPENIA   +  K PL VQ  T PEPP  KV QAA++I+ A++P+IMAGNGVIR  A ++L  FAEK  IPVATTFMAKGAIP SHP SLGTVGLQ+ D+V CGFD+AD+IICVG+DMIE
Sbjct:   36 DSKIRFITTRHEQGAAFMADVYGRLTGRAGVCLSTLGPGATNLVTGVADANMDRAPVVAIAGQAATTRMHKESHQHLDLVSLFAPITKYSTQIREPEILPEVVRKAFKQALAEKPGASFIDFPENIAGAVVEGKEPLTVQAATTPEPPEAKVEQAAEIITGAQHPIIMAGNGVIRAGASEQLQAFAEKLKIPVATTFMAKGAIPFSHPLSLGTVGLQAHDYVDCGFDEADVIICVGYDMIE 276          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A432ERU7_9GAMM (Acetolactate synthase large subunit (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A432ERU7_9GAMM)

HSP 1 Score: 358 bits (919), Expect = 1.470e-120
Identity = 172/242 (71.07%), Postives = 203/242 (83.88%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEIND-KLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            DSKI F+TTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNL+TG ADANMD +P+V IAGQ ST R+HKESHQ+LDLV +F+PISKY A+I+EP I+PE+VRKAFK +Q EKPG SFI FPENIA   ++D + PLK Q PT   PP EK+ QAA +IS A+YP+IMAGNGV+R +A D L +FAE  NIPV  TFMAKG IP SHP SLG+VGLQ+ D+V+CGFD+AD++ICVGFDM+E
Sbjct:   41 DSKIRFVTTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLITGFADANMDRSPIVGIAGQGSTVRMHKESHQILDLVNLFQPISKYAAEIVEPDIVPEVVRKAFKDAQAEKPGGSFISFPENIAHSPVSDAEKPLKAQSPTTSHPPPEKIAQAAGIISAARYPIIMAGNGVVRARAADALTRFAEALNIPVTQTFMAKGCIPFSHPLSLGSVGLQAHDYVACGFDRADVVICVGFDMVE 282          
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Match: A0A3M0XFS9_9BACT (Acetolactate synthase large subunit n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A3M0XFS9_9BACT)

HSP 1 Score: 361 bits (927), Expect = 4.730e-120
Identity = 176/241 (73.03%), Postives = 210/241 (87.14%), Query Frame = 1
Query:    1 DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADANMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIPEIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPREKVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAKGAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE 723
            +SKI FITTRHEQ AAFMADVYGRLTGKAGVC++TLGPGATNLVTGVADANMD+APVVA+AGQAST RLHKESHQVLDLV+MFKPI+KY+ +I+ P +I EIVRKAFK++Q EKPG SFI+FP+NIA L I++K PLK Q    PEPP E++  A +LIS AK+P+I+AGNGV+R KA+ EL  FAEK NIPVATTFMAKG IP  HP +LGTVGLQSRD+++CGFD+AD+IICVG+D++E
Sbjct:   36 NSKITFITTRHEQSAAFMADVYGRLTGKAGVCMSTLGPGATNLVTGVADANMDHAPVVAVAGQASTDRLHKESHQVLDLVDMFKPITKYSTRIVTPEVINEIVRKAFKLAQGEKPGASFIEFPDNIASLYIDEK-PLKAQAAALPEPPSERLNYAIELISSAKHPIILAGNGVVRTKAWKELTNFAEKLNIPVATTFMAKGVIPFKHPMALGTVGLQSRDYINCGFDRADVIICVGYDLVE 275          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96106.22152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V1I020_9BACT8.440e-12977.50Acetolactate synthase large subunit n=2 Tax=root T... [more]
A0A7Z9UQB2_9GAMM4.430e-12676.35Acetolactate synthase large subunit n=1 Tax=Chroma... [more]
A0A0A6PJG8_9GAMM4.430e-12676.35Acetolactate synthase n=1 Tax=Candidatus Thiomarga... [more]
A0A2E3MJA2_9GAMM4.660e-12377.18Acetolactate synthase n=1 Tax=Legionellales bacter... [more]
UPI00102CF5C17.300e-12275.52acetolactate synthase large subunit n=1 Tax=Candid... [more]
A0A2E2THQ0_9GAMM7.520e-12273.86Acetolactate synthase n=1 Tax=Legionellales bacter... [more]
A0A523PHZ4_9PROT7.520e-12273.03Acetolactate synthase large subunit n=1 Tax=Proteo... [more]
A0A800ERA0_9BACT2.280e-12174.69Acetolactate synthase large subunit (Fragment) n=1... [more]
A0A432ERU7_9GAMM1.470e-12071.07Acetolactate synthase large subunit (Fragment) n=1... [more]
A0A3M0XFS9_9BACT4.730e-12073.03Acetolactate synthase large subunit n=1 Tax=Nitros... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96106contigM-pyrifera_M_contig96106:2..724 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score358.6
Seed ortholog evalue2.3e-96
Seed eggNOG ortholog1123517.JOMR01000001_gene601
Preferred nameilvB
KEGG rclassRC00027,RC00106,RC01192,RC02744,RC02893
KEGG koko:K01652
KEGG ReactionR00006,R00014,R00226,R03050,R04672,R04673,R08648
KEGG Pathwayko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00570
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the TPP enzyme family
EggNOG OGs1MU6U@1224,1RR00@1236,4601B@72273,COG0028@1,COG0028@2
EC2.2.1.6
COG Functional cat.EH
Best tax levelThiotrichales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size723
Cds size723
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816876.3364813-CDS-M-pyrifera_M_contig96106:1..7241622816876.3364813-CDS-M-pyrifera_M_contig96106:1..724Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96106 2..724 +
1692278230.8621547-CDS-M-pyrifera_M_contig96106:1..7241692278230.8621547-CDS-M-pyrifera_M_contig96106:1..724Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96106 2..724 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96106.22152.1prot_M-pyrifera_M_contig96106.22152.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig96106 2..724 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig96106.22152.1

>prot_M-pyrifera_M_contig96106.22152.1 ID=prot_M-pyrifera_M_contig96106.22152.1|Name=mRNA_M-pyrifera_M_contig96106.22152.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
DSKIEFITTRHEQGAAFMADVYGRLTGKAGVCLATLGPGATNLVTGVADA
NMDNAPVVAIAGQASTTRLHKESHQVLDLVEMFKPISKYTAQIIEPSIIP
EIVRKAFKVSQTEKPGVSFIDFPENIAELEINDKLPLKVQGPTAPEPPRE
KVTQAAKLISEAKYPLIMAGNGVIRMKAFDELVKFAEKFNIPVATTFMAK
GAIPSSHPQSLGTVGLQSRDFVSCGFDKADLIICVGFDMIE
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mRNA from alignment at M-pyrifera_M_contig96106:2..724+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig96106.22152.1 ID=mRNA_M-pyrifera_M_contig96106.22152.1|Name=mRNA_M-pyrifera_M_contig96106.22152.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig96106:2..724+ (Macrocystis pyrifera P11B4 male)
GACAGTAAGATTGAATTTATTACCACACGACATGAGCAGGGCGCGGCATT TATGGCCGATGTCTATGGTCGTTTAACTGGTAAAGCTGGAGTTTGCTTGG CAACGCTAGGACCAGGAGCAACAAATTTAGTCACAGGTGTCGCCGATGCC AATATGGATAATGCACCCGTGGTTGCAATCGCAGGACAAGCATCAACGAC ACGCTTACATAAAGAAAGCCACCAAGTGTTAGATCTGGTTGAAATGTTTA AACCAATTTCCAAATACACAGCGCAAATCATCGAACCTTCGATTATTCCT GAAATTGTGCGCAAAGCGTTTAAAGTTTCACAAACTGAAAAACCCGGTGT GAGTTTCATTGATTTTCCAGAAAACATTGCTGAACTTGAAATCAATGATA AATTACCATTGAAAGTACAAGGGCCAACAGCGCCAGAACCACCACGCGAA AAAGTCACACAAGCTGCGAAACTCATCAGCGAAGCAAAATACCCATTGAT TATGGCCGGTAACGGTGTGATTCGGATGAAGGCGTTTGATGAGTTGGTTA AGTTTGCTGAAAAATTTAATATTCCAGTTGCGACAACGTTTATGGCAAAA GGCGCGATTCCATCATCGCACCCACAAAGTCTGGGCACTGTTGGTTTGCA ATCGCGTGATTTCGTCAGCTGTGGATTTGATAAAGCTGATTTAATTATCT GTGTTGGTTTTGACATGATCGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig96106:2..724+

>mRNA_M-pyrifera_M_contig96106.22152.1 ID=mRNA_M-pyrifera_M_contig96106.22152.1|Name=mRNA_M-pyrifera_M_contig96106.22152.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig96106:2..724+ (Macrocystis pyrifera P11B4 male)
GACAGTAAGATTGAATTTATTACCACACGACATGAGCAGGGCGCGGCATT
TATGGCCGATGTCTATGGTCGTTTAACTGGTAAAGCTGGAGTTTGCTTGG
CAACGCTAGGACCAGGAGCAACAAATTTAGTCACAGGTGTCGCCGATGCC
AATATGGATAATGCACCCGTGGTTGCAATCGCAGGACAAGCATCAACGAC
ACGCTTACATAAAGAAAGCCACCAAGTGTTAGATCTGGTTGAAATGTTTA
AACCAATTTCCAAATACACAGCGCAAATCATCGAACCTTCGATTATTCCT
GAAATTGTGCGCAAAGCGTTTAAAGTTTCACAAACTGAAAAACCCGGTGT
GAGTTTCATTGATTTTCCAGAAAACATTGCTGAACTTGAAATCAATGATA
AATTACCATTGAAAGTACAAGGGCCAACAGCGCCAGAACCACCACGCGAA
AAAGTCACACAAGCTGCGAAACTCATCAGCGAAGCAAAATACCCATTGAT
TATGGCCGGTAACGGTGTGATTCGGATGAAGGCGTTTGATGAGTTGGTTA
AGTTTGCTGAAAAATTTAATATTCCAGTTGCGACAACGTTTATGGCAAAA
GGCGCGATTCCATCATCGCACCCACAAAGTCTGGGCACTGTTGGTTTGCA
ATCGCGTGATTTCGTCAGCTGTGGATTTGATAAAGCTGATTTAATTATCT
GTGTTGGTTTTGACATGATCGAAGACAGTAAGATTGAATTTATTACCACA
CGACATGAGCAGGGCGCGGCATTTATGGCCGATGTCTATGGTCGTTTAAC
TGGTAAAGCTGGAGTTTGCTTGGCAACGCTAGGACCAGGAGCAACAAATT
TAGTCACAGGTGTCGCCGATGCCAATATGGATAATGCACCCGTGGTTGCA
ATCGCAGGACAAGCATCAACGACACGCTTACATAAAGAAAGCCACCAAGT
GTTAGATCTGGTTGAAATGTTTAAACCAATTTCCAAATACACAGCGCAAA
TCATCGAACCTTCGATTATTCCTGAAATTGTGCGCAAAGCGTTTAAAGTT
TCACAAACTGAAAAACCCGGTGTGAGTTTCATTGATTTTCCAGAAAACAT
TGCTGAACTTGAAATCAATGATAAATTACCATTGAAAGTACAAGGGCCAA
CAGCGCCAGAACCACCACGCGAAAAAGTCACACAAGCTGCGAAACTCATC
AGCGAAGCAAAATACCCATTGATTATGGCCGGTAACGGTGTGATTCGGAT
GAAGGCGTTTGATGAGTTGGTTAAGTTTGCTGAAAAATTTAATATTCCAG
TTGCGACAACGTTTATGGCAAAAGGCGCGATTCCATCATCGCACCCACAA
AGTCTGGGCACTGTTGGTTTGCAATCGCGTGATTTCGTCAGCTGTGGATT
TGATAAAGCTGATTTAATTATCTGTGTTGGTTTTGACATGATCGAA
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