mRNA_M-pyrifera_M_contig96034.22141.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig96034.22141.1
Unique NamemRNA_M-pyrifera_M_contig96034.22141.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: A0A6B1AYP9_9ACTN (Heat-inducible transcription repressor HrcA n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AYP9_9ACTN)

HSP 1 Score: 317 bits (811), Expect = 2.500e-105
Identity = 173/241 (71.78%), Postives = 200/241 (82.99%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHLRSLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAEGDPLLTAALAALSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            RIPTD+GYRFFVD LR  EP+L+ +D G VR FFA A G LES LARTSDLL SLTDC AVV+GPN   A +RSTQLVDL+SH+ MVVAVMSNGVIEKRTVEVATELTPEIV DAGRRLA  V GK+L ++ ++A+  + DPLL AA+ AL AA   AE+ VGG SRVA+AF+AV+Q+RD+L ILEQQIVVV+LI DVLDRGMRVAIG+ETGVEPLA+CSLVVAPY +EG+  G IGVLGP
Sbjct:   71 RIPTDKGYRFFVDALRKREPSLVAADRGMVRQFFADAHGELESVLARTSDLLISLTDCAAVVVGPNVDIARVRSTQLVDLASHVVMVVAVMSNGVIEKRTVEVATELTPEIVQDAGRRLAETVVGKSLAEIQTQAI--DDDPLLNAAVEALRAASHTAEIVVGGASRVAAAFDAVDQIRDVLAILEQQIVVVSLIRDVLDRGMRVAIGQETGVEPLADCSLVVAPYSLEGETTGMIGVLGP 309          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: A0A2D6UCD1_9ACTN (Heat-inducible transcription repressor HrcA n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UCD1_9ACTN)

HSP 1 Score: 301 bits (772), Expect = 1.750e-99
Identity = 166/241 (68.88%), Postives = 196/241 (81.33%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHLRSLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAEGDPLLTAALAALSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            RIPTD+GYRFFVD LR  +  L  +D   +RDFFA   G LES + RTSD+LTSLTD TAVV+GP+   ATIR  Q+VDL+SHIAMVVAV+SNGVIEKRTVEVATELTPEIV+DA RRL  AV+GK L +L   A     DPLL AA+AALSAAGR AE+YVGG SR+ASAF+A  Q++++L +LE+QIVVV+L+ DVLDRGMRVAIG ETGVEPLA+CSLVVAP+ V+G +AGTIGVLGP
Sbjct:   64 RIPTDRGYRFFVDALRDSQTELATADPSTLRDFFAGTHGQLESMMQRTSDMLTSLTDWTAVVVGPSIDQATIRXVQIVDLASHIAMVVAVLSNGVIEKRTVEVATELTPEIVEDASRRLVQAVEGKTLAELEQAAPDDRPDPLLDAAIAALSAAGRHAELYVGGASRLASAFDAAAQLQEVLALLEEQIVVVSLVRDVLDRGMRVAIGNETGVEPLADCSLVVAPFAVDGISAGTIGVLGP 304          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: A0A3M2FZW2_ACTSX (Heat-inducible transcription repressor HrcA n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FZW2_ACTSX)

HSP 1 Score: 266 bits (680), Expect = 4.070e-85
Identity = 147/243 (60.49%), Postives = 191/243 (78.60%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHLRSLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAEG--DPLLTAALAALSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            R+PT++GYRFFVD LR+ +  L P++   V+ FF A  G LES LARTS+LL+ LTD  AVV+GP A AAT+RS QLVDLSSH+ ++V V+S+GV+EKR +EV  EL+PE+V +A RRL A+V G+ + ++      A G  D LL  AL AL+ A  +AEVYVGG SR+ASAF+AVEQVR++L+ILEQQIVVV+L+ DVLDRG++VAIG ETGVEPL+ECS+VVAP+ VEG+A GT+GV+GP
Sbjct:   94 RVPTEKGYRFFVDRLRASDLRLDPANRRTVKAFFEATHGELESLLARTSELLSRLTDGAAVVVGPPAEAATVRSAQLVDLSSHVVLLVVVLSSGVVEKRAIEVGRELSPEVVAEASRRLDASVRGRRVDEVAPAGASARGSDDVLLQEALRALADAATDAEVYVGGVSRLASAFDAVEQVREVLSILEQQIVVVSLVRDVLDRGLQVAIGGETGVEPLSECSVVVAPFRVEGRAEGTVGVIGP 336          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: A0A7X5WQS1_9ACTN (HrcA domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WQS1_9ACTN)

HSP 1 Score: 258 bits (658), Expect = 7.050e-84
Identity = 147/214 (68.69%), Postives = 174/214 (81.31%), Query Frame = 1
Query:   43 LRSLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAEGDPLLTAALAALSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEV 684
            +R+ EP+L+ +D  RV  FFA A G LES L RTS+LLT+LTD TAVV+GP AGAAT+RS QLVDLSSH AMVVAVMSN V+EKR +EV TELTP++V++AGRRLA AV+G+ L DL +E    + DPL+ AA+ AL A+    EV+VGG SR+A AFEAVEQVRD+L ILEQQIVVV+LI DVLDRGMRVAIG ETGVEPLAECSLVVAPY +
Sbjct:    1 MRADEPSLVAADRTRVSQFFADAHGELESMLTRTSELLTTLTDHTAVVVGPAAGAATVRSVQLVDLSSHTAMVVAVMSNSVVEKRVIEVMTELTPDLVEEAGRRLAVAVEGRTLADLTAEP--GDDDPLVAAAIEALRASLPTGEVFVGGASRMADAFEAVEQVRDVLAILEQQIVVVSLIRDVLDRGMRVAIGGETGVEPLAECSLVVAPYAI 212          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: A0A6B1EBU3_9ACTN (Heat-inducible transcription repressor HrcA n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EBU3_9ACTN)

HSP 1 Score: 239 bits (611), Expect = 4.070e-75
Identity = 137/243 (56.38%), Postives = 177/243 (72.84%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHLR--SLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAEGDPLLTAALAALSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            R+PT +GYRFFVD  R  S  P L P D  +V +FF+ + GG ES L+ T+ LL+ LTD TAVV+ P+  AAT+RS QLVDL++ + MVVAVMSNG IEKRT+EV  + +PE+V DA +RLA  V G+ L D+G        D LL AAL AL  A    EV+VGGTS++A+AF+AVEQ+ ++L +LE+Q+VVVT++  VLDRG+RVAIGEETGV  LA+CSLV+APY  +G   GTIGV+GP
Sbjct:   64 RVPTVKGYRFFVDQWRRRSPSPTLDPVDRQQVNEFFSVSHGGFESILSDTTGLLSDLTDWTAVVVAPSPAAATVRSAQLVDLATGMVMVVAVMSNGAIEKRTIEVPADTSPEVVADASQRLARRVVGRTLADIGD--CDEPDDRLLAAALTALREARAHHEVFVGGTSKLAAAFDAVEQLSEVLGLLEKQLVVVTVMRRVLDRGLRVAIGEETGVPSLADCSLVLAPYSTDGSGGGTIGVIGP 304          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: A0A7K1YVJ2_9ACTN (Heat-inducible transcription repressor HrcA n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YVJ2_9ACTN)

HSP 1 Score: 235 bits (600), Expect = 1.860e-73
Identity = 138/243 (56.79%), Postives = 176/243 (72.43%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHLR--SLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAEGDPLLTAALAALSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            R+PT +GYRFFVD  R  S  P L  +D  +V DFF+ + GG ES L+ T+ LLT LTD TAVV+ P+  AAT+RS QLV+L++   MVVAVMSNGVIEKRT++V  + +PE+V DA  RLA  V+G+ L D+  +      D LL AA+AAL  A    EV+VGGTS++A+AF+AVEQ+ ++L +LEQQ+VVVTL+  V+D G RVAIGEETGV  LAECSLV+APY  EG   GTIGV+GP
Sbjct:   64 RVPTVKGYRFFVDQWRQRSPSPTLDLADRLQVNDFFSVSHGGFESILSDTTGLLTDLTDWTAVVVAPSPAAATVRSAQLVELATGTVMVVAVMSNGVIEKRTLDVPDDTSPEVVADASERLARRVEGRTLADI--DDCDQPDDRLLAAAIAALREARAHHEVFVGGTSKLAAAFDAVEQLSEVLGLLEQQLVVVTLMRRVIDGGRRVAIGEETGVPSLAECSLVLAPYSTEGTDGGTIGVIGP 304          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: A0A7Y2GJE1_9ACTN (Heat-inducible transcription repressor HrcA n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GJE1_9ACTN)

HSP 1 Score: 224 bits (571), Expect = 6.060e-69
Identity = 136/247 (55.06%), Postives = 175/247 (70.85%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHL--RSLEPA-LIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGD---LGSEALGAEGDPLLTAALAALSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            RIPT++GYR FVD +      P  L    +  VR+FF  A G LE+ L+ TS LL+ LT+  AVV+ P   AA IRS QLVDL+  + MVVAV++NGVIEK T+E+ATE++ E+V DAGR +A A  G+ LG    + S ALG   D L+ AA+ ALS       V+V G  RVA +FEAVEQVR +LT+LE+Q+VVV+L+ DVLDRG+++AIG ETGVE LA+C+LVVAPYE+ G+ AGTIGVLGP
Sbjct:   71 RIPTEKGYRSFVDSMIGEGKSPGKLARGQAAAVREFFDQAHGELEAMLSDTSRLLSGLTNYAAVVVAPGVDAAAIRSVQLVDLAPQVVMVVAVLANGVIEKHTIELATEVSAEVVADAGRAVADAFVGQTLGSPVSVESRALGT--DELIDAAIGALSGHESNDIVFVDGRDRVAQSFEAVEQVRHVLTVLERQLVVVSLLRDVLDRGLQIAIGNETGVETLADCALVVAPYEIGGETAGTIGVLGP 315          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: UPI002006B65D (heat-inducible transcriptional repressor HrcA n=1 Tax=Aciditerrimonas ferrireducens TaxID=667306 RepID=UPI002006B65D)

HSP 1 Score: 220 bits (560), Expect = 8.920e-67
Identity = 128/248 (51.61%), Postives = 167/248 (67.34%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHLRSLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAEGDPLL-------TAALAALSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            RIPTD+GYRFFVDHL + + AL  S    VR FFA   G +E  L+RTS LLT LT+   VV+GP    A +RS QLV L+  +A++V V+ +G +EKRT+E A E++   +  A   LA +  G+ LG L  E +G+ GDP++         A+AAL+      +V+VGG+SRVASAF+AVE VR +L ILEQQ+VVV LI +VLDRG+ VAIG E G EPLA C+LVV+P EV+G+  G IGVLGP
Sbjct:   84 RIPTDKGYRFFVDHLATSQGALDESQRQEVRRFFAEVHGEVEELLSRTSGLLTELTNYATVVVGPRHEQAPVRSVQLVGLAPTVALLVVVLGDGAVEKRTLEFAEEVSEAALGGATAHLARSWTGRTLGQLAREGVGSSGDPVVDRIGKAAAEAIAALAEGPEAEQVFVGGSSRVASAFDAVETVRSVLAILEQQLVVVELIEEVLDRGLSVAIGAEHGFEPLASCALVVSPVEVQGETTGVIGVLGP 331          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: UPI001AA01F53 (heat-inducible transcriptional repressor HrcA n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA01F53)

HSP 1 Score: 217 bits (553), Expect = 2.400e-66
Identity = 137/248 (55.24%), Postives = 174/248 (70.16%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHLRSLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAE------GDPLLTAALAALSA-AGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            R+PT++GYRFFVD L S    L  +++ +VR+FFA A G LE  L  TS LL++LT  TAVV+GP   AAT+RS QLV L+  +A+VV V+SNGVIEKRTVE   E   E +  AG+RL   + G  L    S A G E       DP+L AAL +L   A  E EVY+ GTS +A+AF+AV  VR+IL ILEQQ VVV+L+ DVLDRG+ VAIG ETGV+PL++C++VVAPYEV+G+ AG+IGVLGP
Sbjct:   64 RVPTEKGYRFFVDTL-SAPGRLAGAEAQQVRNFFAHAHGELERMLQDTSRLLSNLTAYTAVVVGPPHEAATVRSIQLVSLTPTVALVVVVLSNGVIEKRTVEFDDEADEEALAAAGQRLCEVLVGHPL----SHAAGVELEAPDAADPMLVAALRSLGEEAPEEPEVYLAGTSNMAAAFDAVGTVREILRILEQQFVVVSLLKDVLDRGLSVAIGSETGVQPLSDCAVVVAPYEVDGETAGSIGVLGP 306          
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Match: A0A538LM30_9ACTN (Heat-inducible transcription repressor HrcA n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LM30_9ACTN)

HSP 1 Score: 216 bits (551), Expect = 1.030e-65
Identity = 138/246 (56.10%), Postives = 169/246 (68.70%), Query Frame = 1
Query:    1 RIPTDQGYRFFVDHLRSLEPALIPSDSGRVRDFFAAASGGLESTLARTSDLLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRTVEVATELTPEIVDDAGRRLAAAVDGKALGDLGSE-ALGAEG-DPLLTAALAALSAAGREAE---VYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLDRGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP 723
            RIPTD+GYR+FVD L    P L P+   +VR FFA A G LE  L  TS+LL+ LTD  AVV+ P   AA IRS QLV L+   A++V V+SNG +EKR++EV     PE +  A   L A + G+ALGDLG   A G EG D ++ A+LAAL+      +   VYVGG SR+A+AFEAVE VR +LTILEQQ VVVT++ DVLDRG+ VAIG E GV PLAEC++VVAPY   G+ AGTIGVLGP
Sbjct:   89 RIPTDKGYRYFVDRLSGPGP-LDPARQQQVRKFFAQAHGELEQMLHDTSNLLSQLTDYAAVVVSPGTEAAIIRSVQLVSLAHRAALLVVVLSNGAVEKRSLEVDESTGPERLASATAHLNAHLVGRALGDLGQPLATGDEGTDAVVQASLAALTGPDHSEDPEHVYVGGASRMATAFEAVETVRSVLTILEQQYVVVTMLRDVLDRGLSVAIGTEHGVVPLAECAVVVAPYGGAGEDAGTIGVLGP 333          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96034.22141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B1AYP9_9ACTN2.500e-10571.78Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A2D6UCD1_9ACTN1.750e-9968.88Heat-inducible transcription repressor HrcA n=8 Ta... [more]
A0A3M2FZW2_ACTSX4.070e-8560.49Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A7X5WQS1_9ACTN7.050e-8468.69HrcA domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6B1EBU3_9ACTN4.070e-7556.38Heat-inducible transcription repressor HrcA n=2 Ta... [more]
A0A7K1YVJ2_9ACTN1.860e-7356.79Heat-inducible transcription repressor HrcA n=6 Ta... [more]
A0A7Y2GJE1_9ACTN6.060e-6955.06Heat-inducible transcription repressor HrcA n=1 Ta... [more]
UPI002006B65D8.920e-6751.61heat-inducible transcriptional repressor HrcA n=1 ... [more]
UPI001AA01F532.400e-6655.24heat-inducible transcriptional repressor HrcA n=1 ... [more]
A0A538LM30_9ACTN1.030e-6556.10Heat-inducible transcription repressor HrcA n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96034contigM-pyrifera_M_contig96034:2..724 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score181.8
Seed ortholog evalue3.8e-43
Seed eggNOG ortholog1313172.YM304_21110
Preferred namehrcA
KEGG koko:K03705
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
EggNOG OGs2GKF5@201174,4CN2R@84992,COG1420@1,COG1420@2
COG Functional cat.K
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons1
Model size723
Cds size723
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816875.613599-CDS-M-pyrifera_M_contig96034:1..7241622816875.613599-CDS-M-pyrifera_M_contig96034:1..724Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96034 2..724 -
1692278230.3082423-CDS-M-pyrifera_M_contig96034:1..7241692278230.3082423-CDS-M-pyrifera_M_contig96034:1..724Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96034 2..724 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96034.22141.1prot_M-pyrifera_M_contig96034.22141.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig96034 2..724 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig96034.22141.1

>prot_M-pyrifera_M_contig96034.22141.1 ID=prot_M-pyrifera_M_contig96034.22141.1|Name=mRNA_M-pyrifera_M_contig96034.22141.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
RIPTDQGYRFFVDHLRSLEPALIPSDSGRVRDFFAAASGGLESTLARTSD
LLTSLTDCTAVVIGPNAGAATIRSTQLVDLSSHIAMVVAVMSNGVIEKRT
VEVATELTPEIVDDAGRRLAAAVDGKALGDLGSEALGAEGDPLLTAALAA
LSAAGREAEVYVGGTSRVASAFEAVEQVRDILTILEQQIVVVTLISDVLD
RGMRVAIGEETGVEPLAECSLVVAPYEVEGQAAGTIGVLGP
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mRNA from alignment at M-pyrifera_M_contig96034:2..724-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig96034.22141.1 ID=mRNA_M-pyrifera_M_contig96034.22141.1|Name=mRNA_M-pyrifera_M_contig96034.22141.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig96034:2..724- (Macrocystis pyrifera P11B4 male)
CGGATTCCGACCGATCAGGGGTACCGGTTCTTCGTCGATCACCTGCGTTC GCTCGAACCCGCGCTGATCCCTTCCGACAGTGGGCGGGTCCGCGACTTCT TCGCGGCGGCCAGTGGGGGACTCGAATCGACGCTCGCCCGCACCTCCGAC CTGCTCACCTCGCTCACCGATTGCACCGCCGTCGTGATCGGCCCCAATGC CGGCGCAGCCACCATCCGGTCGACCCAGCTCGTCGATTTGTCGAGCCATA TCGCGATGGTCGTCGCCGTGATGTCCAACGGGGTCATCGAGAAGCGCACC GTGGAGGTGGCGACCGAGCTCACCCCCGAGATCGTCGACGACGCCGGGCG CCGGTTGGCGGCGGCGGTTGACGGCAAGGCCCTCGGCGATCTCGGTTCCG AAGCGCTCGGTGCCGAAGGCGACCCCTTGCTCACCGCGGCGCTCGCCGCA CTCAGCGCAGCCGGCCGCGAGGCCGAGGTTTATGTCGGGGGCACGTCCAG AGTGGCGTCGGCGTTCGAAGCCGTCGAGCAGGTGCGCGACATCCTCACGA TCCTCGAACAGCAGATCGTGGTGGTCACCCTGATCTCCGATGTGCTCGAC CGCGGCATGCGGGTGGCGATCGGGGAGGAGACCGGTGTCGAGCCGCTGGC CGAGTGTTCGCTGGTGGTCGCTCCCTACGAGGTCGAGGGGCAGGCGGCCG GCACCATCGGTGTGCTCGGCCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig96034:2..724-

>mRNA_M-pyrifera_M_contig96034.22141.1 ID=mRNA_M-pyrifera_M_contig96034.22141.1|Name=mRNA_M-pyrifera_M_contig96034.22141.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig96034:2..724- (Macrocystis pyrifera P11B4 male)
CGGATTCCGACCGATCAGGGGTACCGGTTCTTCGTCGATCACCTGCGTTC
GCTCGAACCCGCGCTGATCCCTTCCGACAGTGGGCGGGTCCGCGACTTCT
TCGCGGCGGCCAGTGGGGGACTCGAATCGACGCTCGCCCGCACCTCCGAC
CTGCTCACCTCGCTCACCGATTGCACCGCCGTCGTGATCGGCCCCAATGC
CGGCGCAGCCACCATCCGGTCGACCCAGCTCGTCGATTTGTCGAGCCATA
TCGCGATGGTCGTCGCCGTGATGTCCAACGGGGTCATCGAGAAGCGCACC
GTGGAGGTGGCGACCGAGCTCACCCCCGAGATCGTCGACGACGCCGGGCG
CCGGTTGGCGGCGGCGGTTGACGGCAAGGCCCTCGGCGATCTCGGTTCCG
AAGCGCTCGGTGCCGAAGGCGACCCCTTGCTCACCGCGGCGCTCGCCGCA
CTCAGCGCAGCCGGCCGCGAGGCCGAGGTTTATGTCGGGGGCACGTCCAG
AGTGGCGTCGGCGTTCGAAGCCGTCGAGCAGGTGCGCGACATCCTCACGA
TCCTCGAACAGCAGATCGTGGTGGTCACCCTGATCTCCGATGTGCTCGAC
CGCGGCATGCGGGTGGCGATCGGGGAGGAGACCGGTGTCGAGCCGCTGGC
CGAGTGTTCGCTGGTGGTCGCTCCCTACGAGGTCGAGGGGCAGGCGGCCG
GCACCATCGGTGTGCTCGGCCCCCGGATTCCGACCGATCAGGGGTACCGG
TTCTTCGTCGATCACCTGCGTTCGCTCGAACCCGCGCTGATCCCTTCCGA
CAGTGGGCGGGTCCGCGACTTCTTCGCGGCGGCCAGTGGGGGACTCGAAT
CGACGCTCGCCCGCACCTCCGACCTGCTCACCTCGCTCACCGATTGCACC
GCCGTCGTGATCGGCCCCAATGCCGGCGCAGCCACCATCCGGTCGACCCA
GCTCGTCGATTTGTCGAGCCATATCGCGATGGTCGTCGCCGTGATGTCCA
ACGGGGTCATCGAGAAGCGCACCGTGGAGGTGGCGACCGAGCTCACCCCC
GAGATCGTCGACGACGCCGGGCGCCGGTTGGCGGCGGCGGTTGACGGCAA
GGCCCTCGGCGATCTCGGTTCCGAAGCGCTCGGTGCCGAAGGCGACCCCT
TGCTCACCGCGGCGCTCGCCGCACTCAGCGCAGCCGGCCGCGAGGCCGAG
GTTTATGTCGGGGGCACGTCCAGAGTGGCGTCGGCGTTCGAAGCCGTCGA
GCAGGTGCGCGACATCCTCACGATCCTCGAACAGCAGATCGTGGTGGTCA
CCCTGATCTCCGATGTGCTCGACCGCGGCATGCGGGTGGCGATCGGGGAG
GAGACCGGTGTCGAGCCGCTGGCCGAGTGTTCGCTGGTGGTCGCTCCCTA
CGAGGTCGAGGGGCAGGCGGCCGGCACCATCGGTGTGCTCGGCCCC
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