mRNA_M-pyrifera_M_contig9600.22130.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI) HSP 1 Score: 193 bits (490), Expect = 9.630e-53 Identity = 123/261 (47.13%), Postives = 145/261 (55.56%), Query Frame = 1
Query: 13 ELYPRCNREDHVKKKNCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASETHPESSAST-----PGDTGCASPPP--PGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRPSAGLGSNLGSGTGGAWAGAREEGGEGAQGVAGGGEPTGGRGFPENLVAGTLG---------------------AAGDTEAGGTEVVTRE--NDDDKIMEELQRVFGHMQEGVAKVYDPARFASLLGIDNGIQQDPQ 705
+LYPRC REDHV+KKNC NNPRCLYGLGEGKEGIWS KPAL+ ALG D+SG +K +P+ T ++A+ PGD PPP P GL+NLGATCYLNSQLQALFAN+ FR GV++WRPS GGEG G G AAG+ G + V E + D+ IM ELQ VFGHMQEG++KVYDPA F +LL +D G QQDPQ
Sbjct: 5 DLYPRCTREDHVRKKNCSNNPRCLYGLGEGKEGIWSRKPALIAALGEDMSGMVKELPSESTRAATAAAGGSSAGPGDAVVPFPPPRMQRQPTGLKNLGATCYLNSQLQALFANKAFRDGVFSWRPSV-----------------PAAGGEGGSSARGSGANXXXXXXXXXXXXXXXXXXXXXXXXATWVXXXXXXXXRAAGE----GVDSVDLEVASSDNAIMRELQMVFGHMQEGISKVYDPAGFPALLRMDTGSQQDPQ 244
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: A0A5D6XMC9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMC9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 9.310e-20 Identity = 56/124 (45.16%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 22 PRCNREDHVKKK--------NCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAV-PASETHPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRP 366
P C DH +KK NC NP CL+GLGE +EG+W+ + + LG D L+AV P + S++S+P AS P GLRNLGATCYLNS LQ LF N FR VY W P
Sbjct: 38 PACRLVDHHRKKSKSAAALRNCAENPNCLFGLGEHQEGVWAKPKLVQRLLGDDPREQLRAVYPDAPRRKNSASSSPAAESGASL----LPCGLRNLGATCYLNSMLQTLFTNVAFREAVYRWEP 157
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: A0A1V9ZY32_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY32_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.890e-18 Identity = 55/121 (45.45%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 31 NREDHVKKK--------NCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASETHPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRPS 369
N+ VKKK NC NP CLYGLGE EGIW S P L+KALG D S +++ +E + E S P GLRNLGATCY+NS +Q LF + FRR V+ W PS
Sbjct: 28 NKRLAVKKKGKAARRLGNCSENPNCLYGLGEYTEGIWKSVPELLKALGEDPSLSIR----TEINQEKST----------------PCGLRNLGATCYVNSMVQVLFMDLAFRRAVHEWEPS 128
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: G4ZAZ0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZAZ0_PHYSP) HSP 1 Score: 94.4 bits (233), Expect = 1.970e-18 Identity = 55/132 (41.67%), Postives = 65/132 (49.24%), Query Frame = 1
Query: 1 MYDPELY--PRCNREDHVKKK--------NCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASETHPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRP 366
+ DP L P C DH KK+ NC +NP CLYGLGE +G+W + L++ GPD + +G A P P GLRNLGATCYLNS LQ LF N FRR VY W P
Sbjct: 69 LADPYLLQAPPCRLSDHHKKRGRAASALRNCADNPNCLYGLGERLKGVWRRESLLLRVFGPDPRARRRG-----------------SGRAGRP---MPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYGWEP 180
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: A0A024U320_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U320_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.190e-17 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 22 PRCNREDHVKKKNCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASETHPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRP 366
PR R+ ++NC++NP CL+GLGE +GIW + P+++ LGPD S L++ P SE E + + + G P GLRNLGATCY+NS +Q LF FRR V+ W P
Sbjct: 61 PRAARQ----RRNCQDNPNCLFGLGEYADGIWKTNPSVLADLGPDPSTMLRS-PVSE---EDTNNNHDENGAR-------PCGLRNLGATCYVNSMVQCLFMTMSFRRAVHEWEP 160
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: A0A6A3WD98_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WD98_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.230e-17 Identity = 53/132 (40.15%), Postives = 66/132 (50.00%), Query Frame = 1
Query: 1 MYDPELY--PRCNREDHVKKK--------NCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASETHPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRP 366
+ DP L P C DH +++ NC +NP CLYGLGE ++G+W + L++ GPD + +G A P P GLRNLGATCYLNS LQ LF N FRR VY W P
Sbjct: 18 LADPYLLQAPPCRLSDHHRRRGKAASALRNCADNPNCLYGLGERQKGVWRRESLLLRVFGPDPRARRRG-----------------SGRAGRP---TPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEP 129
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: A0A662WKV4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKV4_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.740e-17 Identity = 52/124 (41.94%), Postives = 59/124 (47.58%), Query Frame = 1
Query: 22 PRCNREDHVKKK---------NCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASETHPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRP 366
P C DH +KK NCE NP CL+GLGE ++GIW SK + + G D + T C P GLRNLGATCYLNS LQ LF N FRR VY W P
Sbjct: 138 PPCRFSDHHRKKSKAAAGVLRNCEGNPNCLFGLGERQKGIWQSKQLIRRVFGDDPRERQRI-----------------TACDGAL---LPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEP 241
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: A0A662X1Q3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1Q3_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.830e-17 Identity = 50/122 (40.98%), Postives = 59/122 (48.36%), Query Frame = 1
Query: 28 CNREDHVKKK---------NCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASETHPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRP 366
C DH +KK NCE+NP CL+GLGE ++GIW SK + + G D ++V P GLRNLGATCYLNS LQ LF N FRR VY W P
Sbjct: 379 CRFSDHHRKKSKAAAGVLRNCESNPNCLFGLGERQKGIWQSKQLIRRVFGDDPRERQRSVARDGVL--------------------LPCGLRNLGATCYLNSMLQCLFVNLPFRRAVYEWEP 480
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: A0A485KRV7_9STRA (Aste57867_10741 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRV7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 7.400e-17 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 52 KKNCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASETHPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRP 366
++NC +NP CL+GLGE +GIW S P+++ LGPD S L+ P+ + + + + P GLRNLGATCY+NS +Q LF N FRR V+ W P
Sbjct: 106 RRNCVDNPNCLFGLGEHTDGIWKSTPSVLADLGPDPSENLRC-PSDDNNNAIAVAR--------------PCGLRNLGATCYVNSMVQCLFMNLSFRRAVHEWEP 195
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Match: A0A397B363_9STRA (USP domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B363_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.160e-16 Identity = 49/121 (40.50%), Postives = 63/121 (52.07%), Query Frame = 1
Query: 10 PELYPRCNREDHVKKKNCENNPRCLYGLGEGKEGIWSSKPALVKALGPDISGTLKAVPASET--HPESSASTPGDTGCASPPPPGFPAGLRNLGATCYLNSQLQALFANRGFRRGVYAWRP 366
P PR R+ K NC +NP CL+G GE +G W S P+ + +GPD S L+ +T H +A+ P GLRNLGATCY+NS +Q LF N FRR V+ W P
Sbjct: 59 PTKKPRAARQ----KPNCHDNPNCLFGFGEYADGNWKSTPSALVDIGPDPSDMLRTPLDDDTSIHNNGNAAV-------------RPCGLRNLGATCYVNSMVQCLFMNLSFRRAVHEWEP 162 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9600.22130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9600.22130.1 >prot_M-pyrifera_M_contig9600.22130.1 ID=prot_M-pyrifera_M_contig9600.22130.1|Name=mRNA_M-pyrifera_M_contig9600.22130.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp MYDPELYPRCNREDHVKKKNCENNPRCLYGLGEGKEGIWSSKPALVKALGback to top mRNA from alignment at M-pyrifera_M_contig9600:676..3337- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9600.22130.1 ID=mRNA_M-pyrifera_M_contig9600.22130.1|Name=mRNA_M-pyrifera_M_contig9600.22130.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2662bp|location=Sequence derived from alignment at M-pyrifera_M_contig9600:676..3337- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9600:676..3337- >mRNA_M-pyrifera_M_contig9600.22130.1 ID=mRNA_M-pyrifera_M_contig9600.22130.1|Name=mRNA_M-pyrifera_M_contig9600.22130.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig9600:676..3337- (Macrocystis pyrifera P11B4 male)back to top |