mRNA_M-pyrifera_M_contig95837.22095.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: A0A2E2ZRB7_SPHSX (Uncharacterized protein n=1 Tax=Sphingomonas sp. TaxID=28214 RepID=A0A2E2ZRB7_SPHSX) HSP 1 Score: 164 bits (414), Expect = 1.280e-48 Identity = 84/164 (51.22%), Postives = 116/164 (70.73%), Query Frame = 1
Query: 1 AATLVICSTLAVGSTASAQLSPYAQGPQFQTMVRGIPSTCRSHDNMQ-VAFYSDISLNNIGIATRINGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQCALS 489
AA +C+T ++ QLS YA GPQ+Q VRG+P CR++ N Q VA +SD +L+++GIA+R G P I++NP++ ++SDLV V+W AHECAHHAL P N+E+ ADC AI+++ G++ QL AFS EL+NLPG + GHLPGP+RA+ IA CALS
Sbjct: 13 AALAALCATAWAPPASAQQLSRYAIGPQYQVSVRGVPMNCRAYGNGQYVAIFSDPALDDVGIASRYVGQPYIVLNPDVMARYSDLVAVFWFAHECAHHALGPM-NSESNADCFAIRRMRDLGIIRRREQLLAFSQELRNLPGTAM-GHLPGPLRAQHIAACALS 174
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: A0A7Z0HCX2_9GAMM (Uncharacterized protein n=1 Tax=Psychrobacter sp. BI730 TaxID=2705463 RepID=A0A7Z0HCX2_9GAMM) HSP 1 Score: 162 bits (410), Expect = 3.460e-48 Identity = 82/163 (50.31%), Postives = 106/163 (65.03%), Query Frame = 1
Query: 1 AATLVICSTLAVGSTASAQLSPYAQGPQFQTMVRGIPSTCRSHDNMQVAFYSDISLNNIGIATRINGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQCALS 489
A T ++CS + V T QGP +Q VRG+P C ++ VA + + LNNIG+A NG P+I++NP +++Q+S++V WW AHECAHHAL PQ NNET ADC A++QLVQ G++ QL AFS EL LPG S GHLPGP RA+ I CALS
Sbjct: 9 AVTALLCSQVTVAQT---------QGPMYQINVRGLPMNCTAYSGQPVAIFLNSQLNNIGMANYHNGAPVIMLNPRVASQYSNMVAQWWFAHECAHHALPPQLNNETSADCYAVQQLVQKGVIRRREQLIAFSRELWALPG-SPMGHLPGPYRAQNIINCALS 161
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: UPI0011AB7140 (hypothetical protein n=1 Tax=Sphingosinithalassobacter portus TaxID=2676234 RepID=UPI0011AB7140) HSP 1 Score: 159 bits (403), Expect = 5.950e-47 Identity = 79/146 (54.11%), Postives = 104/146 (71.23%), Query Frame = 1
Query: 55 QLSPYAQGPQFQTMVRGIPSTCRSHDNMQ-VAFYSDISLNNIGIATRINGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQCALS 489
QLS YA GPQ+Q VRG+P CR++ Q VA +SD L+++GIA+ P I++NPN+ ++SDLV VWW AHECAHHAL P N+E+ ADC AI+++ G++ QL AFS EL+NLPG + GHLPGP+RA+ IA CALS
Sbjct: 31 QLSRYAMGPQYQVSVRGLPMNCRAYRTGQYVAIFSDPMLDDVGIASSYGNQPYIVLNPNVMARYSDLVAVWWFAHECAHHALGPM-NSESNADCFAIRRMRDLGIIRRREQLIAFSQELRNLPGTAM-GHLPGPLRAQHIAACALS 174
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: A0A7W9A1C7_9CAUL (Uncharacterized protein n=1 Tax=Brevundimonas halotolerans TaxID=69670 RepID=A0A7W9A1C7_9CAUL) HSP 1 Score: 138 bits (348), Expect = 1.090e-38 Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 76 GPQFQTMVRGIPSTCRSHDNMQVAFYSDISLNNIGIATRI-NGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQCALS 489
G +Q + G+P +C S+ V Y LNN+GIATR+ NG PII+MNP++ +F LV VWW AHEC HHAL P YN+ET ADC ++ L G + N L AF+ +L +LPG S GHLPGP RA+ + C+L+
Sbjct: 33 GGMWQVYIAGVPLSCASYYGEPVRIYMTRDLNNVGIATRVQNGQPIIVMNPDVLARFQPLVQVWWFAHECGHHALGP-YNSETNADCWGVRVLRDQGFIRNVYDLQAFAYDLSSLPG-SAVGHLPGPQRAQNVINCSLT 169
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: UPI000F6573FC (hypothetical protein n=1 Tax=Brevundimonas fluminis TaxID=2487274 RepID=UPI000F6573FC) HSP 1 Score: 137 bits (344), Expect = 3.910e-38 Identity = 71/139 (51.08%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 76 GPQFQTMVRGIPSTCRSHDNMQVAFYSDISLNNIGIATRIN-GNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQCALS 489
G +Q V G+P +C H V Y LNN+GIA R G PI+++NP++ +FS V VWW AHEC HHAL P YN+ET ADC +K + Q GLL + QL+ F+ EL +LPG S GHLPGP RAR IA CAL+
Sbjct: 29 GGMWQVNVAGVPLSCVDHYGTPVRIYVTNGLNNVGIAARTQQGQPIVVLNPDVFARFSPTVQVWWFAHECGHHALGP-YNSETNADCWGVKVMRQQGLLHSYWQLDQFARELASLPG-SPVGHLPGPARARNIANCALT 165
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: UPI001BD912AD (hypothetical protein n=1 Tax=Curvibacter sp. CHRR-16 TaxID=2835872 RepID=UPI001BD912AD) HSP 1 Score: 121 bits (304), Expect = 2.730e-32 Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 1
Query: 109 PSTCRSHDNMQVAFYSDISLNNIGIA-TRINGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQC 480
P C S + V + D +LNN+G+A T NG PII++NPN+ + V +W AHECAHHAL+P N+E ADC AIK + G++SN Q+ + LPGN TGHLPGP RA+ + C
Sbjct: 21 PLPCSSFSGIPVPYIPDPTLNNVGVAHTMQNGQPIIVINPNVVGPLPEYVRQFWYAHECAHHALHPMQNSEVNADCYAIKAIRNIGIISNPQQIGVLLNYISTLPGNIMTGHLPGPARAQNLYAC 145
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: UPI0003809D6B (hypothetical protein n=3 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI0003809D6B) HSP 1 Score: 112 bits (279), Expect = 1.620e-28 Identity = 56/125 (44.80%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 109 PSTCRSHDNMQVAFYSDISLNNIGIAT-RINGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQC 480
P C +++ + V + ++ LNN+G+A +NG PII +NPN+ NQ V +W AHECAHHAL+PQ N+E ADC AIK + G++ N Q+ + LPG S GHLPGP RA+ I C
Sbjct: 23 PLPCTAYNGVPVQYIANPQLNNVGMANVMMNGQPIIQLNPNVINQLPYQVRQFWYAHECAHHALFPQQNSEVNADCWAIKTIRNLGIIQNQQQITQLLNYIFTLPG-SMQGHLPGPARAQNIYWC 146
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: A0A0F6RBG8_9GAMM (Uncharacterized protein n=1 Tax=Kangiella geojedonensis TaxID=914150 RepID=A0A0F6RBG8_9GAMM) HSP 1 Score: 107 bits (266), Expect = 1.560e-26 Identity = 53/126 (42.06%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 109 PSTCRSHDNMQVAFYSDISLNNIGIA--TRINGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQC 480
P C++ + V +Y++ +L+N+G+A TR NG II +NPN+ + V +W AHECAHHAL+P N+E ADC AIK L G++ +Q++ + LPG+ TGHLPGP RA + C
Sbjct: 23 PLPCKAFNGQPVPYYANPNLSNVGVAHMTR-NGQRIIQINPNVVGPLPEYVRQFWYAHECAHHALHPAQNSEVAADCYAIKNLRNIGVIRFRNQVSGLLNYISTLPGSVQTGHLPGPARANNLYAC 147
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: UPI001C909991 (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001C909991) HSP 1 Score: 97.8 bits (242), Expect = 1.500e-23 Identity = 47/96 (48.96%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 193 INGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALYPQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQC 480
++G PII +NPN+ NQ V +W AHECAHHAL+PQ N+E ADC AIK + G++ N Q+ + LPG S GHLPGP RA+ I C
Sbjct: 2 MDGQPIIQLNPNVINQLPYQVRQFWYAHECAHHALFPQQNSEVNADCWAIKTIRNLGIIQNQQQITQLLNYISTLPG-SMQGHLPGPARAQNIYWC 96
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Match: UPI001FBADCDE (hypothetical protein n=1 Tax=Acinetobacter sp. NyZ410 TaxID=2929509 RepID=UPI001FBADCDE) HSP 1 Score: 98.6 bits (244), Expect = 4.330e-23 Identity = 63/148 (42.57%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 43 TASAQLSPYAQGPQFQTMVRGIPSTCRSHDNMQVAFYSDISLNNIGIATRINGNPIIIMNPNISNQFSDLVTVWWVAHECAHHALY--PQYNNETRADCLAIKQLVQYGLLSNASQLNAFSIELQNLPGNSTTGHLPGPMRARAIAQC 480
T SA+ +PY + + G P TC ++ V Y + +L ++G+A N P I++NPN+ N FS L+ V+W+AHEC H + P N E ADC AIKQL L N SQLN + E L G S +GHL GP RA+ IAQC
Sbjct: 21 TTSARSNPY-----YSLNLLGQPWTCSLNNGQLVPIYLNPNLPDVGMAK--NYPPQIVLNPNVMNNFSPLMQVFWLAHECVHATNFQPPGMNPEIDADCKAIKQLKNLNL--NPSQLNQIAYETLPLTG-SHSGHLAGPYRAQLIAQC 158 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95837.22095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95837.22095.1 >prot_M-pyrifera_M_contig95837.22095.1 ID=prot_M-pyrifera_M_contig95837.22095.1|Name=mRNA_M-pyrifera_M_contig95837.22095.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp AATLVICSTLAVGSTASAQLSPYAQGPQFQTMVRGIPSTCRSHDNMQVAFback to top mRNA from alignment at M-pyrifera_M_contig95837:5..496+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95837.22095.1 ID=mRNA_M-pyrifera_M_contig95837.22095.1|Name=mRNA_M-pyrifera_M_contig95837.22095.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig95837:5..496+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95837:5..496+ >mRNA_M-pyrifera_M_contig95837.22095.1 ID=mRNA_M-pyrifera_M_contig95837.22095.1|Name=mRNA_M-pyrifera_M_contig95837.22095.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig95837:5..496+ (Macrocystis pyrifera P11B4 male)back to top |