mRNA_M-pyrifera_M_contig95708.22070.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: L8HC75_ACACA (C2 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HC75_ACACA) HSP 1 Score: 81.3 bits (199), Expect = 2.410e-15 Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRVLEGTKGFLAKHGIIFEVPDRDEDIQS----------GDGTVPYASLAYHKKWENTLGAPTITSVEIEGADDREMLSMPLVIGSLVRHI 387 PPV+ L +YG NL TE+GY++ K + G + LD S SKA+R ++GF K GI++E P + I GDGTV YASL + +W N + P + E+EGA+ R++L+ L L+ +I Sbjct: 870 PPVDRLYAIYGVNLETEIGYVF------KRDAAG---CIVLDDSISKAQRTQLESEGFAVKKGIVWETPRTKQGIVRELTGVDAHICGDGTVTYASLNHCARWRNEI--PKLKIEELEGAEHRQVLANRLFFKKLIEYI 997
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: L8GQ15_ACACA (C2 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQ15_ACACA) HSP 1 Score: 74.3 bits (181), Expect = 6.360e-13 Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRVLEGTKGFLAKHGIIFEVPDRDEDI----------QSGDGTVPYASLAYHKKWENTLGAPTITSVEIEGADDREMLSMPLVIGSLVRHI 387 PPV L +YG NL TE+GY+ FK+ K + L LD + +K L+ GF+ K GI++E + I GDGTV Y+SL + +W N + P +T E++GA+ RE+L+ L ++ ++ Sbjct: 775 PPVRRLYAIYGINLDTEIGYV---FKREKSGS------LALDDNSPPSKNGLQND-GFVFKKGIVYETSKSKQGIVREMTGVDGFTCGDGTVSYSSLNHCARWRNDI--PQLTIEELDGAEHREVLANRLFFKKMIEYV 901
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: A0A7S4L5L0_9EUKA (Hypothetical protein n=2 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L5L0_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 8.200e-11 Identity = 44/137 (32.12%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 4 PVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRVLEGTKGFLAKHGIIFEVPDRDEDIQ------SGDGTVPYASLAYHKKWENTLGAP----TITSVEIEGADDREMLSMPLVIGSLVRH 384 P++ L CVYG N TEVGY Y+ ++ KF L + S KR K + GI +E + SGDGTVP+ASLAY +WE + EI+G++ R+ML V+ +++ + Sbjct: 311 PIKNLFCVYGVNRATEVGYYYKRARQGKF-------VLDTEADVSSKKRTEINPKALTIRGGIAYETRTTVQTAAGVKKAVSGDGTVPFASLAYPLEWEKMAKERGVDFNLEITEIQGSEHRKMLQDESVLINILSY 440
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: A0A7S4V0Q8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4V0Q8_9EUKA) HSP 1 Score: 65.1 bits (157), Expect = 5.750e-10 Identity = 44/137 (32.12%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRVLEGTKGFLAKHGIIFEV-----PDRDEDIQSGDGTVPYASLAYHKKWENTLGAPTITS----VEIEGADDREMLSMPLVIGSLVRH 384 PP++ + C+YG N TEVGY Y+ K K+ L D S K+ + + GI +E P + SGDGTVPY SLAY +WE I EI+G++ R+ML V+ +++ + Sbjct: 135 PPIKNMFCLYGVNRATEVGYYYKQNKSGKYF-----LDSSADESSKKSDAI--NPNKLTIRGGIAYETRTTVQPASAGVMISGDGTVPYQSLAYPLQWEKMAKERGIDFNLEITEIQGSEHRKMLQEESVLLNVLSY 264
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: A0A7S4IHK8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IHK8_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 1.580e-8 Identity = 43/135 (31.85%), Postives = 58/135 (42.96%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRVLEGTK-GFLAKHGIIFEVPDRDED----IQSGDGTVPYASLAYHKKW----ENTLGAPTITSVEIEGADDREMLSMPLVIGSLV 378 PPV L C+YG NL TE+ Y Y N+ L + S E K G G+ FE D ++ + SGDGTVP+ SLAY +W E I E+ + R ML +VI ++ Sbjct: 29 PPVANLWCIYGINLKTEISYYY--------NSHDSHYHLDSNASALNGTVQEEVNKHGLPVSSGVAFETKDTPQEAFGRVGSGDGTVPFCSLAYCHQWKARAEEKKTGQNIVIHELHQKEHRTMLKDDVVIDKIL 155
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: A0A7S4MHF2_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MHF2_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 8.060e-8 Identity = 41/134 (30.60%), Postives = 58/134 (43.28%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRVLEGTKGFLAKHGIIFEVPDRDED----IQSGDGTVPYASLAYHKKW----ENTLGAPTITSVEIEGADDREMLSMPLVIGSLV 378 PPV L C+YG NL TE+ Y Y K + + L +D + +K G G+ FE ++ + SGDGTVP+ SLAY W E I E+ + R ML +VI ++ Sbjct: 560 PPVSNLWCIYGINLKTEISYFYDENKNFQLDGAASILNETVDETTNK--------HGLPIISGVGFETKTTPQEAYGRVGSGDGTVPFCSLAYCHVWKARAEEKKTGQNIVIHELHQKEHRTMLKDDVVIDKIL 685
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: A0A7S4JD38_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JD38_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.110e-7 Identity = 48/151 (31.79%), Postives = 71/151 (47.02%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLT-LKLDRSRSKAKRVLEGTKGFLAKHGIIFEVPDR-----DEDIQ----------SGDGTVPYASLAYHKKWENTLGAPTITS---------VEIEGADDREMLSMPLVIGSLV 378 PPV+ + +YG N+PT +G ++R ++TK EP T LKLD K F K+G++ EVP R D ++ SGDGTV Y SL + W GA T + +E+EGA R++L I +++ Sbjct: 488 PPVKRVWPLYGINVPTLIGSVFR--RQTKRYARDEPSTGLKLD------KHCTVDHPCFEVKNGVVKEVPHRTPQADDPNVPADEMTFGTRASGDGTVAYWSLRWPVAWRGEEGAATAAAAGKIDVDDPLEVEGAGHRDILEKSPCIAAVL 630
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: A0A7S4JRH4_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JRH4_9EUKA) HSP 1 Score: 58.9 bits (141), Expect = 1.170e-7 Identity = 44/141 (31.21%), Postives = 66/141 (46.81%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRV--LEGTKGFLAKHGIIFEVPDRDED------IQSGDGTVPYASLAYHKKW------ENTLGAPTITSVEIEGADDREMLSMPLVIGSLVR 381 P ++ + CVYG TE + +K G+ +KLD V K L + GI +E D+ SGDGTVPYASL++ ++W ++TL P + EI+ A+ REMLS V+ ++R Sbjct: 147 PNIDNVFCVYGTQKKTEACLYLKRDEK------GD---VKLDERADIFSGVECAGNPKKLLIQKGIGYETRTTDQSNCQYNVSSSGDGTVPYASLSFPRRWKQLMDGDDTLEGPNVEIFEIKNAEHREMLSDDAVLYHVIR 278
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: A0A367Q6V7_9NOSO (Uncharacterized protein n=1 Tax=Nostoc sp. ATCC 43529 TaxID=1840705 RepID=A0A367Q6V7_9NOSO) HSP 1 Score: 58.9 bits (141), Expect = 1.450e-7 Identity = 46/141 (32.62%), Postives = 65/141 (46.10%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVG-YIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRVLEGTKGFLAKHGIIFEVPDR------DEDI-QSGDGTVPYASLAYHKKWENTLGAP--TITS---VEIEGADDREMLSMPLVIGSLVRH 384 PPV+ + +Y T VG Y Y+ K K ++ L + V +G F+ +G+ FE D+ D+ I SGDG VPY SLAY K+W N P IT V+ E +D L + L S++RH Sbjct: 392 PPVKNIDVIYSTGFNTPVGAYYYQEEGKLKVASY-------LGNETENLQPVEDGD--FVVINGVRFEKADKTTQLISDDGITNSGDGVVPYGSLAYFKRWTNNPDVPGQKITGYPFVKTEPTEDEAKLGIDLSHNSIIRH 523
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Match: A0A7S4UEQ9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UEQ9_9EUKA) HSP 1 Score: 57.4 bits (137), Expect = 5.110e-7 Identity = 36/98 (36.73%), Postives = 49/98 (50.00%), Query Frame = 1 Query: 1 PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRVLEGTKGFLAKHGIIFEVPDRDEDI----QSGDGTVPYASLAYHKKWE 282 PPV+ L +YG N+ TEV Y + K+ + G L D+ K K KG + G+ +E D + I +SGDGTVPY SLAY W+ Sbjct: 526 PPVKRLWAIYGVNVLTEVSYYF----KSNWKKDGIALDSNADKLGGK-KTAKTNPKGLEIQEGVGYEGKDTLQSIGGVQRSGDGTVPYCSLAYGTMWK 618 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95708.22070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95708.22070.1 >prot_M-pyrifera_M_contig95708.22070.1 ID=prot_M-pyrifera_M_contig95708.22070.1|Name=mRNA_M-pyrifera_M_contig95708.22070.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp PPVEELLCVYGKNLPTEVGYIYRPFKKTKFNTFGEPLTLKLDRSRSKAKRback to top mRNA from alignment at M-pyrifera_M_contig95708:325..711+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95708.22070.1 ID=mRNA_M-pyrifera_M_contig95708.22070.1|Name=mRNA_M-pyrifera_M_contig95708.22070.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig95708:325..711+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95708:325..711+ >mRNA_M-pyrifera_M_contig95708.22070.1 ID=mRNA_M-pyrifera_M_contig95708.22070.1|Name=mRNA_M-pyrifera_M_contig95708.22070.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig95708:325..711+ (Macrocystis pyrifera P11B4 male)back to top |