mRNA_M-pyrifera_M_contig95699.22064.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: A0A5C7KXV2_9GAMM (DUF2063 domain-containing protein n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A5C7KXV2_9GAMM) HSP 1 Score: 61.2 bits (147), Expect = 1.370e-9 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGTR 186 +++N+ +AR ++LL D SG E++ A+A EL+HP P AV+ AG IL L ARD +LGTR Sbjct: 195 MEINAVTARLMQLLEEDAAASGGELLAAIARELQHPQPQAVIDAGAAILADLRARDIVLGTR 256
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: A0A5C7UC22_RHISP (DUF2063 domain-containing protein n=1 Tax=Rhizobium sp. TaxID=391 RepID=A0A5C7UC22_RHISP) HSP 1 Score: 60.8 bits (146), Expect = 1.910e-9 Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGTR 186 +++N+ +AR ++LL D SGAE+M +A EL HP P+AVV AG EIL L RD +LG R Sbjct: 195 MEINAVTARLMQLLEEDAESSGAELMTRIARELNHPQPEAVVEAGAEILRDLRERDILLGAR 256
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: UPI0013EA01AC (putative DNA-binding domain-containing protein n=1 Tax=Thioalkalivibrio sp. XN8 TaxID=2712863 RepID=UPI0013EA01AC) HSP 1 Score: 57.4 bits (137), Expect = 3.790e-8 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFS-GAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGTR 186 +++N +AR +ELL R G S G + + +AAEL HP+PD VVAAG IL+ L ARD ILG R Sbjct: 191 LEINPVTARLLELLDRAVGASSGRDCLLQIAAELGHPSPDTVVAAGAAILDDLRARDVILGVR 253
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: A0A2T5MBL6_9GAMM (DUF2063 domain-containing protein n=1 Tax=Stenotrophobium rhamnosiphilum TaxID=2029166 RepID=A0A2T5MBL6_9GAMM) HSP 1 Score: 57.0 bits (136), Expect = 4.980e-8 Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGTR 186 +++N+ +AR ++LL D SG +++ +A EL HP P AVV AG EIL L RD +LGTR Sbjct: 195 MEINAVTARLMQLLEEDVTSSGTQLLTQIATELGHPQPQAVVDAGAEILRDLRERDILLGTR 256
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: UPI00190DF2C9 (putative DNA-binding domain-containing protein n=1 Tax=Halochromatium glycolicum TaxID=85075 RepID=UPI00190DF2C9) HSP 1 Score: 57.0 bits (136), Expect = 5.120e-8 Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGT 183 + +N+ + R ++LL E SG E++RA+A EL+HPNPD V+A GR +L+ L R ++GT Sbjct: 197 LKINAVTQRLLQLLQAGEQRSGLEVLRAIAGELQHPNPDQVIAFGRGLLDDLRERHILIGT 257
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: A0YCS5_9GAMM (DUF2063 domain-containing protein n=1 Tax=marine gamma proteobacterium HTCC2143 TaxID=247633 RepID=A0YCS5_9GAMM) HSP 1 Score: 55.5 bits (132), Expect = 1.750e-7 Identity = 26/60 (43.33%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILG 180 +++NS +AR +E+LL+D+ +G +++ +AAEL H +P VVAAG EI+++L ILG Sbjct: 188 MEINSVTARMLEILLQDQSLTGRQVLAQIAAELNHADPRQVVAAGLEIMQQLRGLGIILG 247
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: A0A0P9CKP7_9GAMM (DUF2063 domain-containing protein n=1 Tax=Thiohalorhabdus denitrificans TaxID=381306 RepID=A0A0P9CKP7_9GAMM) HSP 1 Score: 54.7 bits (130), Expect = 3.550e-7 Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGT 183 +++N +AR +EL+ E GAE++R +AAE+ HP+P+ VVA G +IL L RD +LGT Sbjct: 200 LEINPVTARLLELM-EQEPAPGAELLRRIAAEIAHPDPERVVAFGADILADLRQRDVVLGT 259
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: A0A7C5C583_9GAMM (DUF2063 domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5C583_9GAMM) HSP 1 Score: 54.3 bits (129), Expect = 4.790e-7 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 1 Query: 4 DLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGT 183 +LN +AR +EL+ E SG ++ VA E+RHP+PD VVA G +LE L + AILGT Sbjct: 192 ELNPVTARLLELVAGGEHASGHAMLEQVAGEIRHPDPDRVVAGGLAVLETLRSAGAILGT 251
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: UPI00190834B5 (putative DNA-binding domain-containing protein n=1 Tax=Thiohalocapsa halophila TaxID=69359 RepID=UPI00190834B5) HSP 1 Score: 54.3 bits (129), Expect = 5.080e-7 Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGTR 186 +++N+ + R + LL + +G E M+ +AAEL HP PD V+AAG +L L RD ILGTR Sbjct: 200 LEINAVTQRLLALLEDETPRTGREAMQVIAAELGHPEPDKVIAAGARMLTDLRRRDVILGTR 261
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Match: A0A1W9KND6_9PROT (DUF2063 domain-containing protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1W9KND6_9PROT) HSP 1 Score: 53.9 bits (128), Expect = 6.710e-7 Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 1 Query: 1 IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILERLVARDAILGT 183 I++N +AR ++LL D+ G +++ VAAEL HP PDAV+ G EIL L ILGT Sbjct: 197 IEINPVTARLLQLLSGDDPVPGRSVLQQVAAELNHPQPDAVIQGGIEILRNLRKCHVILGT 257 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95699.22064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95699.22064.1 >prot_M-pyrifera_M_contig95699.22064.1 ID=prot_M-pyrifera_M_contig95699.22064.1|Name=mRNA_M-pyrifera_M_contig95699.22064.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=65bp IDLNSASARAVELLLRDEGFSGAEIMRAVAAELRHPNPDAVVAAGREILEback to top mRNA from alignment at M-pyrifera_M_contig95699:532..726- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95699.22064.1 ID=mRNA_M-pyrifera_M_contig95699.22064.1|Name=mRNA_M-pyrifera_M_contig95699.22064.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=195bp|location=Sequence derived from alignment at M-pyrifera_M_contig95699:532..726- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95699:532..726- >mRNA_M-pyrifera_M_contig95699.22064.1 ID=mRNA_M-pyrifera_M_contig95699.22064.1|Name=mRNA_M-pyrifera_M_contig95699.22064.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig95699:532..726- (Macrocystis pyrifera P11B4 male)back to top |