mRNA_M-pyrifera_M_contig9568.22060.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A6H5L2L5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2L5_9PHAE) HSP 1 Score: 383 bits (983), Expect = 4.400e-131 Identity = 186/199 (93.47%), Postives = 193/199 (96.98%), Query Frame = 1 Query: 256 KSKIPLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAMKKSAGSEPANGPRVMSGTRQTVVSDRQKL 852 + K+PLLP TLSKAL+AGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLR+SNVVEVLQRKRGLLTNEDVE CKGGMNTWG+VGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAA KKSAGSEPANGPRVMSGT QTVV+DR K+ Sbjct: 112 RPKVPLLPTTLSKALIAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVEKCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRVMSGTVQTVVTDRAKM 310
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A836CMQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ9_9STRA) HSP 1 Score: 273 bits (698), Expect = 5.730e-88 Identity = 144/219 (65.75%), Postives = 169/219 (77.17%), Query Frame = 1 Query: 199 DPYFDDLDD------RPSVSQRKKNKS-----KIPLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA-----AMKKSAGSEPANGPRV 807 +P +D +D R +V +R+++K KIP KAL+AG+FVLGIGTGVTVDSAINT+P+DLASRDAIDRNAPNP ICQTYGSSAMVVD+RVFVTFNPFS++V+QAD KPGCVLR SN V+VL+R R L+ + +VETCKGGMNTW FVGDLN PQLSCVYQSDDAQNEF+S+PK GLGEDVYDDDRAA A + A S GP+ Sbjct: 80 EPRYDGFEDVRTYTSRGAVGERRRDKGFFNSVKIP-------KALLAGIFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPGICQTYGSSAMVVDERVFVTFNPFSIYVAQADVKPGCVLRQSNFVQVLKR-RNLINDAEVETCKGGMNTWAFVGDLNGKPQLSCVYQSDDAQNEFVSDPKIGLGEDVYDDDRAAEQAARAARAVAASATKPGPQA 290
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A7R9WGK2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGK2_9STRA) HSP 1 Score: 250 bits (638), Expect = 3.410e-80 Identity = 119/168 (70.83%), Postives = 144/168 (85.71%), Query Frame = 1 Query: 274 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAMKKSA 777 LP ++SKAL+AG+FVLGIGTGVT++S INT P+DLASRDAIDRNAPNP +C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV+VL R+R L+ + +V TCK +NTW FVGDL++ PQLSCVYQSDDAQNEFLSNPK G+GEDVYDDDRA+ +K A Sbjct: 16 LPESVSKALLAGIFVLGIGTGVTIESQINTSPKDLASRDAIDRNAPNPTLCAQYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRQSNVVQVL-RERKLINDNEVRTCKQKVNTWAFVGDLDNMPQLSCVYQSDDAQNEFLSNPKLGIGEDVYDDDRASLERKRA 182
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A7S2SJB4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJB4_9STRA) HSP 1 Score: 250 bits (638), Expect = 1.460e-79 Identity = 128/198 (64.65%), Postives = 153/198 (77.27%), Query Frame = 1 Query: 211 DDLDD----RPSVSQRKKNKSKIP------LLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAMKKS 774 DD+DD PSV +RK + + L P L+ L+AGVFVLGIGTGVTVDSAINT+P+DLASRDAIDR APN +CQ YG+SAMV+DQR+FVTFNPF+++V+QADTKPGCVLR+SNVV VLQ K GLL +++ CK MNTWGFVG L+D PQLSCVY+S DAQNEFLSNPK GLGED+YD+ A K + Sbjct: 52 DDVDDFTRSGPSVDERKMREDAVVSGGLARLFPKQLTNYLLAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRAAPNAELCQQYGASAMVMDQRLFVTFNPFNVYVTQADTKPGCVLRSSNVVPVLQGK-GLLDRDEIAACKNNMNTWGFVGTLDDRPQLSCVYKSQDAQNEFLSNPKIGLGEDIYDNGIPGAGKNA 248
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A7S3PTW4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTW4_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.850e-79 Identity = 126/195 (64.62%), Postives = 155/195 (79.49%), Query Frame = 1 Query: 274 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA--AMKKSAGSEPANGPRVMSGTRQTVVSDRQKL 852 LP ++S AL+AGVFVLGIGTGVTVDS INT P+DLASRDA+D+ APNP +C TYG+SAM DQRVFV+FNPF+++V+QAD KP CVLRASNVV VLQ RGL+ ++V +CK MNTW FVGDLND+PQLSCVY+S+DAQNEFLS+PKYG+GEDV+DDDR A A +K + + NG M+ ++V Q L Sbjct: 111 LPESVSTALLAGVFVLGIGTGVTVDSQINTSPKDLASRDAVDQAAPNPRLCSTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRASNVVPVLQ-DRGLINGKEVRSCKQNMNTWAFVGDLNDYPQLSCVYRSEDAQNEFLSDPKYGIGEDVWDDDRVAIEAARKGSVKKVKNG---MTEGEKSVAMKAQAL 301
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A7S4WJP8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WJP8_9STRA) HSP 1 Score: 249 bits (635), Expect = 2.710e-78 Identity = 130/207 (62.80%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 157 RRRGRPDDFVDEDYDPYFDDLDDRPSVSQRKKNKSKIPLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAMKKSA 777 RRR RP D D DD D SV KS L PA++SKAL+AGVFVLGIGTGVT+DS INT+P+DLASRDA+DRNAPNP +C TYG+ AM DQRVFV+FNPF+++V+QAD KP CVLR +NVV +L R++ L+ + +V +CK MNTW FVGDL D PQLSCVY+S+DAQNEFLSNPK G+GEDV+DDDR MK +A Sbjct: 91 RRRRRPID------DLGSDDSDRSMSVPSPFGLKSGWRL-PASVSKALLAGVFVLGIGTGVTIDSQINTNPKDLASRDAVDRNAPNPELCTTYGAPAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPANVVPIL-REKNLINDAEVRSCKQNMNTWAFVGDLQDMPQLSCVYKSEDAQNEFLSNPKLGIGEDVWDDDREKMMKNAA 289
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A7S2UF23_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF23_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.320e-77 Identity = 116/166 (69.88%), Postives = 143/166 (86.14%), Query Frame = 1 Query: 274 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAMKK 771 LP ++SK+L+AG+FVLGIGTGVTVDSAINT+ RDLASRDAIDRNAPNP +C TYG+SAM DQRVFV+FNPF+++V+QAD KP CVLR +N+V +L R+R ++ + +V +CK MNTW +VGDL+D PQLSCVYQS+DAQNEFLSNPK G+GEDV+DDDRA A K Sbjct: 117 LPDSVSKSLLAGIFVLGIGTGVTVDSAINTNERDLASRDAIDRNAPNPELCSTYGASAMAFDQRVFVSFNPFAVYVAQADVKPACVLRPANIVPIL-RERNMINDAEVRSCKKNMNTWAYVGDLDDMPQLSCVYQSEDAQNEFLSNPKLGIGEDVWDDDRAKATGK 281
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A7S4I7G3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I7G3_9STRA) HSP 1 Score: 243 bits (620), Expect = 4.680e-76 Identity = 116/176 (65.91%), Postives = 145/176 (82.39%), Query Frame = 1 Query: 274 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAA-MKKSAGSEPANG 798 LP ++SKAL+AG+FVLGIG GV ++S +NT P+DLASRDAID+NAPNP +C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV+VL ++R L+ + +V +CK +NTW FVGDL+ PQ+SCVYQSDDAQNEFLSNPK G+GEDVYDDDRAA KKS G + +G Sbjct: 117 LPDSVSKALLAGIFVLGIGAGVAIESQVNTSPKDLASRDAIDKNAPNPTLCAQYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRQSNVVQVL-KERNLINDNEVRSCKQKVNTWAFVGDLDSMPQISCVYQSDDAQNEFLSNPKLGIGEDVYDDDRAALERKKSTGKQIKSG 291
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: A0A7R9WZG6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZG6_9STRA) HSP 1 Score: 236 bits (602), Expect = 2.510e-74 Identity = 115/193 (59.59%), Postives = 149/193 (77.20%), Query Frame = 1 Query: 274 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA--AMKKSAGSEPANGPRVMSGTRQTVVSDRQ 846 LPA++S+A++AGVFVLGIG GVT+DSAINT+PRDLASRDAID+ APN ++C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV +L ++R L+ +++V +CK MNTW FVG+L D PQLSCVY+S DAQNEFLSNPKYG+GED DDDRA + KK+ + G + ++ S + Sbjct: 47 LPASVSQAVLAGVFVLGIGLGVTIDSAINTNPRDLASRDAIDQAAPNSSLCANYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPSNVVPIL-KQRNLINDDEVRSCKANMNTWAFVGNLGDAPQLSCVYKSADAQNEFLSNPKYGIGEDYLDDDRAKVESFKKNVKGDLTQGQKDAMQRQRMAASSTE 238
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Match: W7TER9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TER9_9STRA) HSP 1 Score: 236 bits (602), Expect = 7.450e-74 Identity = 113/168 (67.26%), Postives = 138/168 (82.14%), Query Frame = 1 Query: 256 KSKIPL----LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTNEDVETCKGGMNTWGFVGDLNDHPQLSCVYQSDDAQNEFLS-NPKYGLGEDVYD 744 K+++P +P LS AL+ G FVLG+GTGVTVDSA+NT+ +DLASRDAID+NAPNP CQ YG+S +V+D R+FV+FNPF ++V+QAD KPGCVLRA+NVV+ LQ RGLLT+E+V CK G NTW +VGD+ND PQLSCVYQSDDAQNEFL NPK G+GEDVYD Sbjct: 105 KNRLPFGISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQG-RGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYD 271 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9568.22060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9568.22060.1 >prot_M-pyrifera_M_contig9568.22060.1 ID=prot_M-pyrifera_M_contig9568.22060.1|Name=mRNA_M-pyrifera_M_contig9568.22060.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=285bp LQTAGFVCPNSVAPLSTTAHRASSRGVSPWTTAISGQGASATRDGAKHALback to top mRNA from alignment at M-pyrifera_M_contig9568:5258..8229+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9568.22060.1 ID=mRNA_M-pyrifera_M_contig9568.22060.1|Name=mRNA_M-pyrifera_M_contig9568.22060.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2972bp|location=Sequence derived from alignment at M-pyrifera_M_contig9568:5258..8229+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9568:5258..8229+ >mRNA_M-pyrifera_M_contig9568.22060.1 ID=mRNA_M-pyrifera_M_contig9568.22060.1|Name=mRNA_M-pyrifera_M_contig9568.22060.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1710bp|location=Sequence derived from alignment at M-pyrifera_M_contig9568:5258..8229+ (Macrocystis pyrifera P11B4 male)back to top |