mRNA_M-pyrifera_M_contig95631.22051.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95631.22051.1
Unique NamemRNA_M-pyrifera_M_contig95631.22051.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: A0A517PGK7_9PLAN (Type II secretion system protein G n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517PGK7_9PLAN)

HSP 1 Score: 222 bits (565), Expect = 1.590e-70
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 
Query:    1 WTFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGTVGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            WTFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGTVGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF
Sbjct:  235 WTFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGTVGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 333
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: A0A517ZZS2_9PLAN (Type II secretion system protein G n=9 Tax=Gimesia TaxID=1649453 RepID=A0A517ZZS2_9PLAN)

HSP 1 Score: 186 bits (471), Expect = 2.520e-56
Identity = 83/100 (83.00%), Postives = 89/100 (89.00%), Query Frame = 1 
Query:    1 WTFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGT-VGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            WT+NGVSQTWGHAKWVGHGVDLTY  GIN+W CCSW SPP    T  GRLGDWS+VGSLHTGGAHVLMGDGAVRF+SEN+DATTRN LAYI+DGNPIGEF
Sbjct:  235 WTYNGVSQTWGHAKWVGHGVDLTYSRGINWWPCCSWDSPPFARPTGPGRLGDWSTVGSLHTGGAHVLMGDGAVRFISENIDATTRNNLAYISDGNPIGEF 334
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: A0A517W4D3_9PLAN (Type II secretion system protein G n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W4D3_9PLAN)

HSP 1 Score: 182 bits (461), Expect = 8.070e-55
Identity = 81/100 (81.00%), Postives = 88/100 (88.00%), Query Frame = 1 
Query:    1 WTFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGT-VGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            WT+NGVS TWGHAKWVGHGVDLTY  GIN+W CCSW SPP    T  GRLGDWS+VGSLHTGGAHVL+GDGAVRF+SEN+DATTRN LAYIADGNP+GEF
Sbjct:  235 WTYNGVSATWGHAKWVGHGVDLTYSRGINWWPCCSWDSPPFQRPTGPGRLGDWSTVGSLHTGGAHVLLGDGAVRFISENIDATTRNNLAYIADGNPLGEF 334
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: A0A517ZZR9_9PLAN (Type II secretion system protein G n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517ZZR9_9PLAN)

HSP 1 Score: 179 bits (454), Expect = 9.120e-54
Identity = 81/100 (81.00%), Postives = 88/100 (88.00%), Query Frame = 1 
Query:    1 WTFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGT-VGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            WT+NGVSQTWG+ KWVG GVDLTY  GIN+W CCSW SPP    T  GRLGDWS+VGSLHTGGAHVLMGDGAVRF+SEN+DATTRNRLAYI+DGNPIGEF
Sbjct:  235 WTYNGVSQTWGYTKWVGMGVDLTYSRGINWWPCCSWDSPPFQRPTGPGRLGDWSTVGSLHTGGAHVLMGDGAVRFISENIDATTRNRLAYISDGNPIGEF 334
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: A0A517R8J2_9PLAN (Type II secretion system protein G n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R8J2_9PLAN)

HSP 1 Score: 177 bits (448), Expect = 7.280e-53
Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 1 
Query:    1 WTFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGT-VGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            WT+NGVSQTWG++KWVG+GVDLTY  GIN+W CCSW SPP    T  GRLGDWS+VGSLHTGGAHVL+GDGAVRF+SEN+DATTRN LAYI+DGNP+GEF
Sbjct:  235 WTYNGVSQTWGYSKWVGNGVDLTYSRGINWWPCCSWDSPPFQRPTGPGRLGDWSTVGSLHTGGAHVLLGDGAVRFISENIDATTRNNLAYISDGNPLGEF 334
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: A0A517Z9C2_9PLAN (Type II secretion system protein G n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z9C2_9PLAN)

HSP 1 Score: 168 bits (425), Expect = 2.130e-49
Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 1 
Query:    4 TFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPP--NVSGTVGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            T+NGVSQTWG++KWVG+GVDLTY  GIN+W CCSW S P       VGRLGDWS+VGSLHTGGAH+L+GDGAVRF+SEN+DATTRNRLAYI DG P+GEF
Sbjct:  236 TWNGVSQTWGYSKWVGNGVDLTYSRGINFWLCCSWDSTPFSRTPVVVGRLGDWSTVGSLHTGGAHILLGDGAVRFLSENIDATTRNRLAYIKDGQPMGEF 335
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: A0A517QNZ0_9PLAN (Type II secretion system protein G n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QNZ0_9PLAN)

HSP 1 Score: 160 bits (405), Expect = 1.930e-46
Identity = 71/100 (71.00%), Postives = 82/100 (82.00%), Query Frame = 1 
Query:    4 TFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPP--NVSGTVGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            T+NG  Q WG++KWVGHGVDL Y  GIN+WKCCSW S P       VGRLGDWS+VGSLHTGGAHVL+GDG+VRF+SEN+D+TTR RL YIADG P+GEF
Sbjct:  232 TWNGRPQAWGYSKWVGHGVDLQYSRGINFWKCCSWDSSPFTRTPEIVGRLGDWSTVGSLHTGGAHVLLGDGSVRFLSENIDSTTRVRLGYIADGQPVGEF 331
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: UPI0014230B6C (DUF1559 domain-containing protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014230B6C)

HSP 1 Score: 139 bits (350), Expect = 3.710e-38
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 1 
Query:    7 FNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPP--NVSGTVGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            +NG  QTWG++KWVG GVDLTY  GIN+  CCSW SPP         RLGDWS+VGSLH GGA VL+ DGAVRFVSE +D +TRN LAYIADG  +G++
Sbjct:  240 WNGTGQTWGYSKWVGAGVDLTYSRGINFTVCCSWDSPPFQRPGARASRLGDWSTVGSLHPGGAQVLLADGAVRFVSETIDPSTRNNLAYIADGQVLGDY 338
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: A0A7D8UCR5_9PLAN (DUF1559 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7D8UCR5_9PLAN)

HSP 1 Score: 137 bits (344), Expect = 4.100e-37
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 1 
Query:    4 TFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGTV--GRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            T+NGVS TWG+AKWVGHGVD+TY  G+N+  CC W SPP V   V   RLGDWS+ GS+H GGA   +GDG+VRF+SE+++  T  RLA+IADG P+GEF
Sbjct:  256 TWNGVSPTWGYAKWVGHGVDVTYARGMNFNFCCGWDSPPMVRQPVLKQRLGDWSTAGSMHPGGAQFTLGDGSVRFISESIELITLQRLAFIADGQPLGEF 355
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BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Match: UPI001EE8E23E (DUF1559 domain-containing protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE8E23E)

HSP 1 Score: 134 bits (337), Expect = 1.780e-36
Identity = 58/96 (60.42%), Postives = 68/96 (70.83%), Query Frame = 1 
Query:   10 NGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGTVGRLGDWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF 297
            +GV+ TWG+ KWVG GVD     GIN W CC W +PPN + T G LG W + GS H GG  VLMGDG+VRF+SEN+D TTR  LAYI+DG  IGEF
Sbjct:  216 DGVTSTWGYTKWVGSGVDFAMTRGINDWLCCGWNTPPNANNTSGSLGTWGAPGSSHPGGMQVLMGDGSVRFISENIDDTTRTNLAYISDGKVIGEF 311
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95631.22051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PGK7_9PLAN1.590e-70100.00Type II secretion system protein G n=3 Tax=Gimesia... [more]
A0A517ZZS2_9PLAN2.520e-5683.00Type II secretion system protein G n=9 Tax=Gimesia... [more]
A0A517W4D3_9PLAN8.070e-5581.00Type II secretion system protein G n=1 Tax=Gimesia... [more]
A0A517ZZR9_9PLAN9.120e-5481.00Type II secretion system protein G n=4 Tax=Gimesia... [more]
A0A517R8J2_9PLAN7.280e-5378.00Type II secretion system protein G n=2 Tax=Gimesia... [more]
A0A517Z9C2_9PLAN2.130e-4975.00Type II secretion system protein G n=1 Tax=Maioric... [more]
A0A517QNZ0_9PLAN1.930e-4671.00Type II secretion system protein G n=1 Tax=Thalass... [more]
UPI0014230B6C3.710e-3863.64DUF1559 domain-containing protein n=1 Tax=Rubinisp... [more]
A0A7D8UCR5_9PLAN4.100e-3761.00DUF1559 domain-containing protein n=1 Tax=Planctom... [more]
UPI001EE8E23E1.780e-3660.42DUF1559 domain-containing protein n=1 Tax=Rubinisp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95631contigM-pyrifera_M_contig95631:429..728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score99.0
Seed ortholog evalue1.3e-18
Seed eggNOG ortholog344747.PM8797T_04855
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Pfam:N_methyl_2
EggNOG OGs2J1YI@203682,COG2165@1,COG2165@2
COG Functional cat.NU
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size300
Cds size300
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816870.7317567-CDS-M-pyrifera_M_contig95631:428..7281622816870.7317567-CDS-M-pyrifera_M_contig95631:428..728Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95631 429..728 -
1692278227.1921675-CDS-M-pyrifera_M_contig95631:428..7281692278227.1921675-CDS-M-pyrifera_M_contig95631:428..728Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95631 429..728 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95631.22051.1prot_M-pyrifera_M_contig95631.22051.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95631 429..728 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95631.22051.1

>prot_M-pyrifera_M_contig95631.22051.1 ID=prot_M-pyrifera_M_contig95631.22051.1|Name=mRNA_M-pyrifera_M_contig95631.22051.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp
WTFNGVSQTWGHAKWVGHGVDLTYGNGINYWKCCSWYSPPNVSGTVGRLG
DWSSVGSLHTGGAHVLMGDGAVRFVSENLDATTRNRLAYIADGNPIGEF*
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mRNA from alignment at M-pyrifera_M_contig95631:429..728-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95631.22051.1 ID=mRNA_M-pyrifera_M_contig95631.22051.1|Name=mRNA_M-pyrifera_M_contig95631.22051.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig95631:429..728- (Macrocystis pyrifera P11B4 male)
TGGACCTTCAACGGGGTATCGCAGACGTGGGGCCACGCGAAATGGGTGGG
CCATGGTGTCGACCTGACTTACGGTAACGGTATCAATTACTGGAAATGCT
GTTCCTGGTACTCACCACCAAATGTCAGTGGAACCGTGGGCCGATTGGGT
GACTGGTCTTCCGTGGGCAGTTTACACACCGGTGGTGCCCATGTCTTAAT
GGGCGATGGTGCAGTTCGCTTTGTTAGTGAGAACTTGGACGCCACCACTC
GTAATCGGCTTGCCTACATTGCCGATGGAAACCCGATTGGTGAATTCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95631:429..728-

>mRNA_M-pyrifera_M_contig95631.22051.1 ID=mRNA_M-pyrifera_M_contig95631.22051.1|Name=mRNA_M-pyrifera_M_contig95631.22051.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig95631:429..728- (Macrocystis pyrifera P11B4 male)
TGGACCTTCAACGGGGTATCGCAGACGTGGGGCCACGCGAAATGGGTGGG
CCATGGTGTCGACCTGACTTACGGTAACGGTATCAATTACTGGAAATGCT
GTTCCTGGTACTCACCACCAAATGTCAGTGGAACCGTGGGCCGATTGGGT
GACTGGTCTTCCGTGGGCAGTTTACACACCGGTGGTGCCCATGTCTTAAT
GGGCGATGGTGCAGTTCGCTTTGTTAGTGAGAACTTGGACGCCACCACTC
GTAATCGGCTTGCCTACATTGCCGATGGAAACCCGATTGGTGAATTCTAA
TGGACCTTCAACGGGGTATCGCAGACGTGGGGCCACGCGAAATGGGTGGG
CCATGGTGTCGACCTGACTTACGGTAACGGTATCAATTACTGGAAATGCT
GTTCCTGGTACTCACCACCAAATGTCAGTGGAACCGTGGGCCGATTGGGT
GACTGGTCTTCCGTGGGCAGTTTACACACCGGTGGTGCCCATGTCTTAAT
GGGCGATGGTGCAGTTCGCTTTGTTAGTGAGAACTTGGACGCCACCACTC
GTAATCGGCTTGCCTACATTGCCGATGGAAACCCGATTGGTGAATTCTAA
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