mRNA_M-pyrifera_M_contig95631.22050.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95631.22050.1
Unique NamemRNA_M-pyrifera_M_contig95631.22050.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A0A517PGL4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PGL4_9PLAN)

HSP 1 Score: 197 bits (501), Expect = 2.170e-63
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1
Query:    1 MLKYRLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR 282
            MLKYRLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR
Sbjct:    1 MLKYRLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR 94          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A0A517X3D5_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X3D5_9PLAN)

HSP 1 Score: 123 bits (308), Expect = 4.560e-34
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 1
Query:    1 MLKYRLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR 282
            ML  RLLLSCL  CL GCGG    E+TL+VYPV+G+VTVDG+ LP+V+V F P + T G G  G TDETG FTLK +D RDGV EGTYRVLF+R
Sbjct:    1 MLHNRLLLSCLFFCLVGCGGAS--ENTLEVYPVSGSVTVDGEALPNVSVTFFPEKPTKGNGGFGATDETGNFTLKDRDQRDGVAEGTYRVLFTR 92          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A0A517R8G2_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R8G2_9PLAN)

HSP 1 Score: 120 bits (300), Expect = 7.470e-33
Identity = 59/94 (62.77%), Postives = 69/94 (73.40%), Query Frame = 1
Query:    1 MLKYRLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR 282
            M   RLLLSCL  CL GCGG    E+TL+VYPV G+VTVDG+ LP+V+V F P + T G G  G TDE+G FTLK +D RDGV EGTYRVLF+R
Sbjct:    1 MWHNRLLLSCLFFCLVGCGGAS--ENTLEVYPVTGSVTVDGEALPAVSVTFFPEKSTKGNGGFGATDESGKFTLKDRDQRDGVAEGTYRVLFTR 92          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A0A5A8AX18_9PLAN (Carboxypeptidase-like regulatory domain-containing protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A5A8AX18_9PLAN)

HSP 1 Score: 110 bits (275), Expect = 4.920e-29
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 1
Query:   13 RLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR 282
            RLLL CL L L GCGGGG  E+TL+VYPV+GTVTVDG+ +  V+V F P   T G G  G TD +G FTLK +D RDGV EGTYRVL +R
Sbjct:    5 RLLLCCLFLGLVGCGGGG-SENTLEVYPVSGTVTVDGEAVQGVSVTFFPEGTTKGNGGFGATDASGQFTLKDRDQRDGVAEGTYRVLLTR 93          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A0A6I6ADQ5_9PLAN (Carboxypeptidase-like regulatory domain-containing protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6ADQ5_9PLAN)

HSP 1 Score: 110 bits (274), Expect = 6.970e-29
Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 1
Query:   13 RLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR 282
            R+LL CL L L GCGGGG  E+TL+VYPV+GTVTVDG+ +  V+V F P   T G G  G TD +G FTLK +D RDGV EGTYRVL +R
Sbjct:    5 RILLCCLFLGLVGCGGGG-SENTLEVYPVSGTVTVDGEAMQGVSVTFFPEGTTKGNGGFGATDASGQFTLKDRDQRDGVAEGTYRVLLTR 93          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A0A518FJJ0_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A518FJJ0_9PLAN)

HSP 1 Score: 87.4 bits (215), Expect = 5.590e-20
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 1
Query:   34 LLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLF 276
            LL LT CG        L  +P  GTV + GK +P ++V F P   TSG G  G TDE+G F L+Y+D RDGVP G+YRVLF
Sbjct:   11 LLFLTACGSADEKRDELKTFPTWGTVKIKGKTVPGISVVFFPEGQTSGQGGRGTTDESGQFILRYQDGRDGVPPGSYRVLF 91          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A0A517RJF1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RJF1_9PLAN)

HSP 1 Score: 84.3 bits (207), Expect = 1.150e-18
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 1
Query:    7 KYRLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFS 279
            +   +L  LL+ +TGCGG    ES  +  PV+G VT++G PL S TV F+P   T G+   GVTDETG +TLK     +G P G YRV+ +
Sbjct:    7 RVHFVLCILLVGMTGCGGANAKESLPETVPVSGIVTMNGTPLVSATVTFVPQGATKGVECVGVTDETGKYTLKQVRGAEGAPPGDYRVVIN 97          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A6C805_9PLAN (Uncharacterized protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6C805_9PLAN)

HSP 1 Score: 79.7 bits (195), Expect = 6.840e-17
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   10 YRLLLSCLLL----CLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFS 279
            YRL L  L +    CL+GCGG    ES  D  PV+G +T++GKP+ S TV F+P   T G+   GVTDE+G +TL+      G P G YRV+ +
Sbjct:    3 YRLSLYSLFVASTVCLSGCGGTTVAESLPDTAPVSGVITLNGKPITSATVTFVPMGSTKGVECVGVTDESGKYTLQQIRGAAGAPPGEYRVVIN 96          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: UPI001189018E (carboxypeptidase-like regulatory domain-containing protein n=1 Tax=Gimesia maris TaxID=122 RepID=UPI001189018E)

HSP 1 Score: 79.7 bits (195), Expect = 6.840e-17
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1
Query:   10 YRLLLSCLLL----CLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFS 279
            YRL L  LL+    CL+GCGG    ES  D  PV+G +T++GKP+ S TV F+P   T G+   GVTDE+G ++L+      G P G YRV+ +
Sbjct:    3 YRLSLYSLLVASTVCLSGCGGTTVAESLPDTAPVSGVITLNGKPITSATVTFVPMGSTKGVECVGVTDESGKYSLQQIRGAAGAPPGEYRVVIN 96          
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Match: A0A517WTD5_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WTD5_9PLAN)

HSP 1 Score: 77.8 bits (190), Expect = 3.430e-16
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 1
Query:   31 LLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVFFMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR 282
            L++  TGCGGG   +      PV+G VT++G+PL S TV F+P   T G+   G TDE+G +TLK +   +G P G Y+V+ SR
Sbjct:   10 LVVMTTGCGGGVEAKPLPKTVPVSGVVTLNGQPLASATVTFIPDGQTKGIECQGTTDESGQYTLKQQHGTEGAPPGNYKVVVSR 93          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95631.22050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PGL4_9PLAN2.170e-63100.00Uncharacterized protein n=1 Tax=Gimesia chilikensi... [more]
A0A517X3D5_9PLAN4.560e-3464.89Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A0A517R8G2_9PLAN7.470e-3362.77Uncharacterized protein n=1 Tax=Gimesia alba TaxID... [more]
A0A5A8AX18_9PLAN4.920e-2962.22Carboxypeptidase-like regulatory domain-containing... [more]
A0A6I6ADQ5_9PLAN6.970e-2961.11Carboxypeptidase-like regulatory domain-containing... [more]
A0A518FJJ0_9PLAN5.590e-2050.62Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]
A0A517RJF1_9PLAN1.150e-1845.05Uncharacterized protein n=1 Tax=Gimesia alba TaxID... [more]
A6C805_9PLAN6.840e-1744.68Uncharacterized protein n=6 Tax=Planctomycetaceae ... [more]
UPI001189018E6.840e-1744.68carboxypeptidase-like regulatory domain-containing... [more]
A0A517WTD5_9PLAN3.430e-1644.05Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95631contigM-pyrifera_M_contig95631:1..282 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score75.9
Seed ortholog evalue1.1e-11
Seed eggNOG ortholog344747.PM8797T_23564
Hectar predicted targeting categorysignal peptide
EggNOG OGs2DR7W@1,2J1N3@203682,33AKT@2
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size282
Cds size282
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816870.699988-CDS-M-pyrifera_M_contig95631:0..2821622816870.699988-CDS-M-pyrifera_M_contig95631:0..282Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95631 1..282 -
1692278227.1764662-CDS-M-pyrifera_M_contig95631:0..2821692278227.1764662-CDS-M-pyrifera_M_contig95631:0..282Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95631 1..282 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95631.22050.1prot_M-pyrifera_M_contig95631.22050.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95631 1..282 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95631.22050.1

>prot_M-pyrifera_M_contig95631.22050.1 ID=prot_M-pyrifera_M_contig95631.22050.1|Name=mRNA_M-pyrifera_M_contig95631.22050.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp
MLKYRLLLSCLLLCLTGCGGGGGDESTLDVYPVNGTVTVDGKPLPSVTVF
FMPAEGTSGLGAGGVTDETGAFTLKYKDDRDGVPEGTYRVLFSR
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mRNA from alignment at M-pyrifera_M_contig95631:1..282-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95631.22050.1 ID=mRNA_M-pyrifera_M_contig95631.22050.1|Name=mRNA_M-pyrifera_M_contig95631.22050.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=282bp|location=Sequence derived from alignment at M-pyrifera_M_contig95631:1..282- (Macrocystis pyrifera P11B4 male)
ATGCTGAAATATCGACTACTTTTGAGCTGTTTGCTTCTCTGCCTGACAGG ATGTGGTGGTGGAGGTGGCGACGAATCGACCCTTGATGTTTACCCTGTGA ACGGGACTGTGACTGTAGACGGAAAGCCATTGCCTTCTGTGACAGTCTTT TTCATGCCTGCGGAAGGAACCTCAGGATTAGGTGCAGGCGGGGTGACCGA TGAAACAGGGGCTTTTACTCTGAAGTATAAAGATGACCGGGACGGTGTTC CTGAAGGGACTTATCGAGTCCTGTTTTCCCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95631:1..282-

>mRNA_M-pyrifera_M_contig95631.22050.1 ID=mRNA_M-pyrifera_M_contig95631.22050.1|Name=mRNA_M-pyrifera_M_contig95631.22050.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig95631:1..282- (Macrocystis pyrifera P11B4 male)
ATGCTGAAATATCGACTACTTTTGAGCTGTTTGCTTCTCTGCCTGACAGG
ATGTGGTGGTGGAGGTGGCGACGAATCGACCCTTGATGTTTACCCTGTGA
ACGGGACTGTGACTGTAGACGGAAAGCCATTGCCTTCTGTGACAGTCTTT
TTCATGCCTGCGGAAGGAACCTCAGGATTAGGTGCAGGCGGGGTGACCGA
TGAAACAGGGGCTTTTACTCTGAAGTATAAAGATGACCGGGACGGTGTTC
CTGAAGGGACTTATCGAGTCCTGTTTTCCCGCATGCTGAAATATCGACTA
CTTTTGAGCTGTTTGCTTCTCTGCCTGACAGGATGTGGTGGTGGAGGTGG
CGACGAATCGACCCTTGATGTTTACCCTGTGAACGGGACTGTGACTGTAG
ACGGAAAGCCATTGCCTTCTGTGACAGTCTTTTTCATGCCTGCGGAAGGA
ACCTCAGGATTAGGTGCAGGCGGGGTGACCGATGAAACAGGGGCTTTTAC
TCTGAAGTATAAAGATGACCGGGACGGTGTTCCTGAAGGGACTTATCGAG
TCCTGTTTTCCCGC
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