mRNA_M-pyrifera_M_contig95616.22046.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95616.22046.1
Unique NamemRNA_M-pyrifera_M_contig95616.22046.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A517WHK5_9PLAN (Virginiamycin B lyase n=7 Tax=Gimesia TaxID=1649453 RepID=A0A517WHK5_9PLAN)

HSP 1 Score: 434 bits (1117), Expect = 1.350e-138
Identity = 216/234 (92.31%), Postives = 228/234 (97.44%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQMPGAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEEAVIRAIMATVEENFADLASANNGDFATTNNPGDYGIRILNSFDN 702
            YIMVSSFYTGTPNDPFDETSGNGAGTN+RAEGAYDLTVGLN+QDVDY+AVELEAGDILGANVTGA QT++MYGPSGGLIQQSSFYLSD+YPA++PLPGDGNAAASFVAPVAGTYYVG+TGDVGLYDLQLRVFRPELETQM GAIQTLYIDFDGA+VDPSIFDSFQ SRTATMSPLSSFLGNWGLTAADEEAVIRAI+ATVEENFADL  ANNGDFATT NPGDYGI+ILNSFDN
Sbjct:  290 YIMVSSFYTGTPNDPFDETSGNGAGTNARAEGAYDLTVGLNVQDVDYYAVELEAGDILGANVTGAGQTLAMYGPSGGLIQQSSFYLSDIYPANTPLPGDGNAAASFVAPVAGTYYVGVTGDVGLYDLQLRVFRPELETQMVGAIQTLYIDFDGADVDPSIFDSFQTSRTATMSPLSSFLGNWGLTAADEEAVIRAILATVEENFADLGLANNGDFATTMNPGDYGIQILNSFDN 523          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A518AAV1_9PLAN (Virginiamycin B lyase n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AAV1_9PLAN)

HSP 1 Score: 357 bits (915), Expect = 2.950e-110
Identity = 171/234 (73.08%), Postives = 204/234 (87.18%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQMPGAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEEAVIRAIMATVEENFADLASANNGDFATTNNPGDYGIRILNSFDN 702
            Y+ V+SF TG PNDP+D  SGNG G  S AEGAYDLT+G N+QD+DY+AV+LEAGD+LGANVTG+ QTVS+Y PSG L+ +SSFYL+DLYPA+SPLPGDGNAAA+ VAPVAGTYY+G+TGD G YDLQLR +RPELETQ  GAIQTLYIDFDGA+VDP++FDS   + + ++S + +FLGNWGLT+ADEEAVIRAIMATVEENFAD+  ANNGDFAT+N PGDYGI+ILNS+DN
Sbjct:  292 YVAVTSFATGFPNDPYDSASGNGVGAGSLAEGAYDLTIGRNVQDIDYYAVQLEAGDVLGANVTGSGQTVSLYDPSGTLMMESSFYLADLYPANSPLPGDGNAAAAVVAPVAGTYYIGVTGDNGFYDLQLRTYRPELETQPVGAIQTLYIDFDGADVDPALFDSVYNTSSVSLSAMDTFLGNWGLTSADEEAVIRAIMATVEENFADVGLANNGDFATSNIPGDYGIQILNSYDN 525          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A350KD55_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KD55_9PLAN)

HSP 1 Score: 325 bits (834), Expect = 1.180e-100
Identity = 170/243 (69.96%), Postives = 191/243 (78.60%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQMP--GAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEEAVIRAIMATVEENFADLA-SANNGDF------ATTNNPGDYGIRILNSFDN 702
            Y+MV  F TG P DPFD  SG G GTNS +EG YDLT+GLN  DVDY+AVELEAGDILGANV GA QTVS+YGPSG L+ +SS +LSDLYP DSPLPGDGNA+AS VA   GTYY+ +TG  GLYDL+LR FRPELETQ+    A+QTLYIDFDGA VDPSIF+ F  S  A +SPLSSFL NWGL+AADEEAVIRAIMATVEENFAD+    NNG++      A   NPGDYGIRILNS+DN
Sbjct:  284 YVMVGGFGTGLPLDPFDPASGGGVGTNSSSEGTYDLTIGLNAVDVDYYAVELEAGDILGANVFGAGQTVSLYGPSGTLLFESSRFLSDLYPDDSPLPGDGNASASIVAATTGTYYISVTGVYGLYDLELRAFRPELETQLADTAAVQTLYIDFDGATVDPSIFNEFLPSSDAALSPLSSFLANWGLSAADEEAVIRAIMATVEENFADIGVQGNNGEYFDPVTGAVIGNPGDYGIRILNSWDN 526          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A518IH30_9PLAN (NHL repeat protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IH30_9PLAN)

HSP 1 Score: 327 bits (839), Expect = 8.570e-100
Identity = 167/237 (70.46%), Postives = 195/237 (82.28%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQM--PGAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWG-LTAADEEAVIRAIMATVEENFADLAS-ANNGDFATTNNPGDYGIRILNSFD 699
            Y+MVSSF TG+P+DPFD  SGNG G ++R+EG YDLT+GLN+ D+DY+AVELEAGDILGAN+ GA QTVS+  P+G  + +SS +L+DLYP DSPLPGDGNAAAS VAPV GTYYV +TGD GLYDLQLR FRPELETQM  P AIQT++IDFDGA VDPSIFD    S TAT+SPLS+FL NW  +T ADE+AVI AI+AT+EENFAD+    NNGD+ TT NPGDYGIRILNS D
Sbjct:  297 YVMVSSFGTGSPSDPFDSASGNGVGASARSEGLYDLTIGLNVSDIDYYAVELEAGDILGANLYGAGQTVSLISPTGQTMFESSRFLADLYPDDSPLPGDGNAAASIVAPVTGTYYVAVTGDFGLYDLQLRAFRPELETQMVGPDAIQTIFIDFDGATVDPSIFDDTLDSTTATLSPLSAFLDNWNDVTTADEDAVIDAILATIEENFADIGVLGNNGDYNTTTNPGDYGIRILNSRD 533          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A517RK39_9PLAN (Virginiamycin B lyase n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RK39_9PLAN)

HSP 1 Score: 324 bits (831), Expect = 1.010e-98
Identity = 167/236 (70.76%), Postives = 190/236 (80.51%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQM--PGAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEEAVIRAIMATVEENFADLASA-NNGDFATTNNPGDYGIRILNSFD 699
            Y+MVSSF TG P DPFD  SG G G N+ +EG YDLT+GLN  D+DY+AVELEAGDILGANV GA QT+S+Y P+G L+ +SS +L DLYP DSPLPGDGNA+AS VAPV+GTY+V +TGD GLYDLQLR FRP+LETQM  P AIQTL+IDFDGA VDPS FD    S TA +SPLSSFL +WGLTAADE+AVI AI+AT+ ENFADL    NNGDF TT  PGDYGIRILNS D
Sbjct:  298 YVMVSSFGTGGPTDPFDSASGTGVGANADSEGLYDLTIGLNAADIDYYAVELEAGDILGANVYGAGQTLSLYSPTGLLMFESSRFLEDLYPEDSPLPGDGNASASIVAPVSGTYFVAVTGDYGLYDLQLRAFRPQLETQMVGPDAIQTLFIDFDGATVDPSTFDDTLGSSTAALSPLSSFLSDWGLTAADEDAVIDAILATITENFADLGMVGNNGDFDTTMIPGDYGIRILNSRD 533          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A517XG19_9PLAN (Virginiamycin B lyase n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517XG19_9PLAN)

HSP 1 Score: 323 bits (829), Expect = 1.900e-98
Identity = 169/243 (69.55%), Postives = 190/243 (78.19%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQMP--GAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEEAVIRAIMATVEENFADLA-SANNGDF------ATTNNPGDYGIRILNSFDN 702
            Y+MV  F TG P DPFD  SG G G NS +EG YDLT+GLN  DVDY+AVELEAGDILGANV GA QTVS+YGPSG L+ +SS +LSDLYP DSPLPGDGNA+AS VA   GTYY+ +TG  GLYDL+LR FRPELETQ+    A+QTLYIDFDGA VDPSIF+ F  S  A +SPLSSFL NWGL+AADEEAVIRAIMATVEENFAD+    NNG++      A   NPGDYGIRILNS+DN
Sbjct:  282 YVMVGGFGTGLPLDPFDPASGGGVGANSSSEGTYDLTIGLNAVDVDYYAVELEAGDILGANVFGAGQTVSLYGPSGTLLFESSRFLSDLYPDDSPLPGDGNASASIVAATTGTYYISVTGVYGLYDLELRAFRPELETQLADTAAVQTLYIDFDGATVDPSIFNEFLPSSDAALSPLSSFLANWGLSAADEEAVIRAIMATVEENFADIGVQGNNGEYFDPVTGAVIGNPGDYGIRILNSWDN 524          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A517VTH8_9PLAN (Virginiamycin B lyase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VTH8_9PLAN)

HSP 1 Score: 298 bits (763), Expect = 1.680e-89
Identity = 155/240 (64.58%), Postives = 189/240 (78.75%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQM--PGAIQTLYIDFDGAEVDPSIFDSFQASRT-ATMSPLSSFLGNWGLTAADEEAVIRAIMATVEENFADLAS-ANNGDF---ATTNNPGDYGIRILNSFD 699
            +IMV  F TG P+DP DETSG G G N+ AEG Y+LTVGLN  D+DY++ ELEAGD+LGANV GA QT+++Y  +G L+ +SS +LSDLYP DSPLPGDGNA+ASFVAP +GTY+V +TG +GLY+L+L+VFRPELETQ+   GA+QTL+IDFDGA VDP++FD F      A +SPLS+FL NWGLT ADE+AVI AIMAT+ +NFAD+ S  NNGDF       NPGDYGIRILNS D
Sbjct:  289 FIMVGGFGTGLPSDPNDETSGAGVGPNASAEGVYNLTVGLNAVDIDYYSFELEAGDVLGANVFGAGQTLALYDSTGQLLIESSRFLSDLYPEDSPLPGDGNASASFVAPTSGTYFVSVTGIIGLYNLELKVFRPELETQLVDSGAVQTLFIDFDGANVDPALFDDFLVPPDIANLSPLSAFLSNWGLTDADEDAVIDAIMATITDNFADVGSLGNNGDFFDPINGGNPGDYGIRILNSRD 528          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A2E2CB57_9PLAN (Uncharacterized protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CB57_9PLAN)

HSP 1 Score: 296 bits (759), Expect = 6.000e-89
Identity = 158/247 (63.97%), Postives = 185/247 (74.90%), Query Frame = 1
Query:    1 YIMVSSFYTGT----PNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQM--PGAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEEAVIRAIMATVEENFADL-ASANNGDF------ATTNNPGDYGIRILNSFDN 702
            Y+MV  + TG     P+DPFD  SG+G G N+ +EG Y+LTV LN  D+DY+AV+LEAGDILGANV GA QT+S+YGPSG L+ +SS +L DLYP DSPLPGDGNA+ S VA  AG YYV +TG  G YDL+LR FRP LETQ+    A+QTLY+DFDGA VDPSIF+ F  S  A +SPLSSFL NWGL+AADE AVI AIMATVEENFA + A+ NNG+F      A   NPGDYGIRILNS DN
Sbjct:  284 YLMVGGYNTGYGIGFPDDPFDPASGSGVGANASSEGTYNLTVSLNATDIDYYAVDLEAGDILGANVFGAGQTISLYGPSGTLLFESSRFLEDLYPDDSPLPGDGNASGSIVAATAGRYYVAVTGVYGTYDLELRAFRPALETQLVDTAAVQTLYVDFDGATVDPSIFNDFLPSSDANLSPLSSFLANWGLSAADENAVIDAIMATVEENFAVIGANGNNGNFFDPVTGAVIGNPGDYGIRILNSRDN 530          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A517VID2_9PLAN (NHL repeat protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VID2_9PLAN)

HSP 1 Score: 287 bits (735), Expect = 1.040e-85
Identity = 156/246 (63.41%), Postives = 185/246 (75.20%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQMP--GAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEE---AVIRAIMATVEENFADL-ASANNGDF------ATTNNPGDYGIRILNSFDN 702
            YI+VSS  TG P+D  D TSGNG GT S AEG Y LT+GLN  DVDY++V+LEAGDILGANV GA Q VS+Y P G  I +SS Y++ LYP DSPLPGDGNAAASFVAP AGTY++ ++G+ G YDL+LR FRP LETQ    GA+QTLYIDFDGAEVDPSIF    +SRTAT+S + +FL NW L+  DE+   AVI AIMAT++ENFAD+ A+ NNG++      A    PGDYGIRILNS DN
Sbjct:  293 YILVSSSSTGLPSDANDPTSGNGVGTASSAEGDYHLTIGLNATDVDYYSVDLEAGDILGANVFGAGQIVSLYQPDGTPIMRSSQYMTGLYPEDSPLPGDGNAAASFVAPTAGTYFISVSGNEGFYDLELRAFRPVLETQPEDSGAVQTLYIDFDGAEVDPSIFYDSLSSRTATLSSMDAFLSNWELSDTDEDVKNAVIDAIMATIKENFADIGANGNNGEYFDPDTDAVIGTPGDYGIRILNSRDN 538          
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Match: A0A6F8Z0D4_9ACTN (PPC domain-containing protein n=1 Tax=Phytohabitans suffuscus TaxID=624315 RepID=A0A6F8Z0D4_9ACTN)

HSP 1 Score: 181 bits (460), Expect = 7.910e-50
Identity = 109/236 (46.19%), Postives = 149/236 (63.14%), Query Frame = 1
Query:    1 YIMVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVELEAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNAAASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQMPGAIQTLYIDFDGAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEEAVIRAIMATVEENF-ADL-ASANNGDFATTNNPGDYGIRILNSFDN 702
            Y+ V+ F T  PNDPFD  SG GA +    EG Y +T+ +   D D+FAV+L  GD+LGA+V+G+   +S+Y      +Q S+   S ++PA +PLPG GNA A +VA  AG +YVG++G  G YD+ +  +RP LE++ P  +QTL++DFDGA ++ +IF         T+SP S+FLG WGLT ADE AVI A++ATVEEN  +DL AS  NG F          I+I NS DN
Sbjct:  269 YVFVTGFLT-LPNDPFDPASGTGADS----EGPYGVTMLVGEADTDFFAVKLRKGDVLGASVSGSGTLLSVYDTVPREVQGSTQDASFIFPASTPLPGGGNAVADYVAEKAGWHYVGVSGGSGTYDVTVEAYRPALESEAP-PVQTLFLDFDGARLNTAIFGG---PGVRTLSPFSAFLGRWGLTRADENAVIDAVLATVEENLKSDLVASGLNGRFR---------IQIKNSRDN 486          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95616.22046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WHK5_9PLAN1.350e-13892.31Virginiamycin B lyase n=7 Tax=Gimesia TaxID=164945... [more]
A0A518AAV1_9PLAN2.950e-11073.08Virginiamycin B lyase n=4 Tax=Gimesia panareensis ... [more]
A0A350KD55_9PLAN1.180e-10069.96Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A518IH30_9PLAN8.570e-10070.46NHL repeat protein n=1 Tax=Gimesia fumaroli TaxID=... [more]
A0A517RK39_9PLAN1.010e-9870.76Virginiamycin B lyase n=1 Tax=Gimesia alba TaxID=2... [more]
A0A517XG19_9PLAN1.900e-9869.55Virginiamycin B lyase n=5 Tax=Gimesia TaxID=164945... [more]
A0A517VTH8_9PLAN1.680e-8964.58Virginiamycin B lyase n=2 Tax=Gimesia aquarii TaxI... [more]
A0A2E2CB57_9PLAN6.000e-8963.97Uncharacterized protein n=5 Tax=Planctomycetaceae ... [more]
A0A517VID2_9PLAN1.040e-8563.41NHL repeat protein n=1 Tax=Gimesia algae TaxID=252... [more]
A0A6F8Z0D4_9ACTN7.910e-5046.19PPC domain-containing protein n=1 Tax=Phytohabitan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95616contigM-pyrifera_M_contig95616:3..704 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score325.9
Seed ortholog evalue1.6e-86
Seed eggNOG ortholog344747.PM8797T_21828
KEGG koko:K01406,ko:K02414,ko:K07004,ko:K13277,ko:K21449
KEGG TC1.B.40.2
KEGG Pathwayko01503,ko02024,ko02040,map01503,map02024,map02040
Hectar predicted targeting categoryother localisation
EggNOG free text desc.antibiotic catabolic process
EggNOG OGsCOG1044@1,COG1044@2,COG2931@1,COG2931@2,COG4257@1,COG4257@2
EC3.4.24.40
COG Functional cat.V
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko02000,ko02035,ko03110
Exons1
Model size702
Cds size696
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816870.4937544-UTR-M-pyrifera_M_contig95616:2..81622816870.4937544-UTR-M-pyrifera_M_contig95616:2..8Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig95616 3..8 +
1692278227.0721347-UTR-M-pyrifera_M_contig95616:2..81692278227.0721347-UTR-M-pyrifera_M_contig95616:2..8Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig95616 3..8 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816870.5109742-CDS-M-pyrifera_M_contig95616:8..7041622816870.5109742-CDS-M-pyrifera_M_contig95616:8..704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95616 9..704 +
1692278227.0832422-CDS-M-pyrifera_M_contig95616:8..7041692278227.0832422-CDS-M-pyrifera_M_contig95616:8..704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95616 9..704 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95616.22046.1prot_M-pyrifera_M_contig95616.22046.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95616 9..704 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95616.22046.1

>prot_M-pyrifera_M_contig95616.22046.1 ID=prot_M-pyrifera_M_contig95616.22046.1|Name=mRNA_M-pyrifera_M_contig95616.22046.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
MVSSFYTGTPNDPFDETSGNGAGTNSRAEGAYDLTVGLNIQDVDYFAVEL
EAGDILGANVTGAAQTVSMYGPSGGLIQQSSFYLSDLYPADSPLPGDGNA
AASFVAPVAGTYYVGITGDVGLYDLQLRVFRPELETQMPGAIQTLYIDFD
GAEVDPSIFDSFQASRTATMSPLSSFLGNWGLTAADEEAVIRAIMATVEE
NFADLASANNGDFATTNNPGDYGIRILNSFDN
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mRNA from alignment at M-pyrifera_M_contig95616:3..704+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95616.22046.1 ID=mRNA_M-pyrifera_M_contig95616.22046.1|Name=mRNA_M-pyrifera_M_contig95616.22046.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig95616:3..704+ (Macrocystis pyrifera P11B4 male)
TACATCATGGTCTCCAGCTTCTATACTGGCACTCCGAATGATCCTTTCGA TGAAACCAGTGGAAATGGTGCTGGAACTAACTCGCGGGCCGAAGGGGCTT ACGATCTGACAGTCGGTCTGAACATACAGGATGTGGATTACTTTGCAGTC GAACTGGAAGCAGGCGACATTCTGGGAGCCAACGTAACCGGCGCAGCCCA GACGGTTTCCATGTATGGCCCCAGTGGCGGTCTGATTCAGCAGTCGTCTT TCTACCTGTCAGATCTTTACCCTGCTGACAGTCCCCTGCCCGGCGATGGT AACGCCGCGGCCTCCTTCGTGGCTCCAGTAGCCGGAACTTATTATGTGGG GATAACGGGTGATGTCGGGCTCTATGATCTCCAGTTGCGAGTTTTCCGTC CCGAGTTGGAAACCCAGATGCCCGGCGCTATCCAGACACTGTACATCGAT TTTGATGGGGCAGAAGTCGATCCTTCCATCTTTGACAGTTTCCAGGCTTC ACGTACTGCTACCATGTCCCCCTTAAGCTCGTTCCTGGGGAACTGGGGGC TCACCGCTGCTGATGAGGAAGCGGTCATCCGGGCTATTATGGCCACTGTG GAAGAGAATTTTGCTGACCTCGCATCGGCCAACAATGGTGATTTTGCTAC CACCAACAATCCGGGTGACTACGGAATTCGCATCTTAAACAGTTTTGATA AC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95616:3..704+

>mRNA_M-pyrifera_M_contig95616.22046.1 ID=mRNA_M-pyrifera_M_contig95616.22046.1|Name=mRNA_M-pyrifera_M_contig95616.22046.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig95616:3..704+ (Macrocystis pyrifera P11B4 male)
ATGGTCTCCAGCTTCTATACTGGCACTCCGAATGATCCTTTCGATGAAAC
CAGTGGAAATGGTGCTGGAACTAACTCGCGGGCCGAAGGGGCTTACGATC
TGACAGTCGGTCTGAACATACAGGATGTGGATTACTTTGCAGTCGAACTG
GAAGCAGGCGACATTCTGGGAGCCAACGTAACCGGCGCAGCCCAGACGGT
TTCCATGTATGGCCCCAGTGGCGGTCTGATTCAGCAGTCGTCTTTCTACC
TGTCAGATCTTTACCCTGCTGACAGTCCCCTGCCCGGCGATGGTAACGCC
GCGGCCTCCTTCGTGGCTCCAGTAGCCGGAACTTATTATGTGGGGATAAC
GGGTGATGTCGGGCTCTATGATCTCCAGTTGCGAGTTTTCCGTCCCGAGT
TGGAAACCCAGATGCCCGGCGCTATCCAGACACTGTACATCGATTTTGAT
GGGGCAGAAGTCGATCCTTCCATCTTTGACAGTTTCCAGGCTTCACGTAC
TGCTACCATGTCCCCCTTAAGCTCGTTCCTGGGGAACTGGGGGCTCACCG
CTGCTGATGAGGAAGCGGTCATCCGGGCTATTATGGCCACTGTGGAAGAG
AATTTTGCTGACCTCGCATCGGCCAACAATGGTGATTTTGCTACCACCAA
CAATCCGGGTGACTACGGAATTCGCATCTTAAACAGTTTTGATAACATGG
TCTCCAGCTTCTATACTGGCACTCCGAATGATCCTTTCGATGAAACCAGT
GGAAATGGTGCTGGAACTAACTCGCGGGCCGAAGGGGCTTACGATCTGAC
AGTCGGTCTGAACATACAGGATGTGGATTACTTTGCAGTCGAACTGGAAG
CAGGCGACATTCTGGGAGCCAACGTAACCGGCGCAGCCCAGACGGTTTCC
ATGTATGGCCCCAGTGGCGGTCTGATTCAGCAGTCGTCTTTCTACCTGTC
AGATCTTTACCCTGCTGACAGTCCCCTGCCCGGCGATGGTAACGCCGCGG
CCTCCTTCGTGGCTCCAGTAGCCGGAACTTATTATGTGGGGATAACGGGT
GATGTCGGGCTCTATGATCTCCAGTTGCGAGTTTTCCGTCCCGAGTTGGA
AACCCAGATGCCCGGCGCTATCCAGACACTGTACATCGATTTTGATGGGG
CAGAAGTCGATCCTTCCATCTTTGACAGTTTCCAGGCTTCACGTACTGCT
ACCATGTCCCCCTTAAGCTCGTTCCTGGGGAACTGGGGGCTCACCGCTGC
TGATGAGGAAGCGGTCATCCGGGCTATTATGGCCACTGTGGAAGAGAATT
TTGCTGACCTCGCATCGGCCAACAATGGTGATTTTGCTACCACCAACAAT
CCGGGTGACTACGGAATTCGCATCTTAAACAGTTTTGATAAC
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