mRNA_M-pyrifera_M_contig95591.22037.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: A0A7S4HMC9_9EUKA (DNA replication licensing factor MCM3 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HMC9_9EUKA) HSP 1 Score: 252 bits (643), Expect = 1.890e-77 Identity = 133/205 (64.88%), Postives = 158/205 (77.07%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTDQALLGPQTASEAALYN--SYDDXXXXXXQ-PVYVQINRLLHGD--RREGEIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLSSVTTADD 600 KAGIHTTLNARCSV+AAANPVYGQYNR+KKPTENIGLPDSLLSRFDLLFIVLDNF+P HDR I HVLRMHRYR ++ G Q +S +L++ ++D + P+YVQ N+LLH + R++ +FS FLKKYL YAK+R P + EAAAYI+KAYSDLR KED+KTLPVT RTL+ M+RL AHAKCRLS V T +D Sbjct: 242 KAGIHTTLNARCSVLAAANPVYGQYNREKKPTENIGLPDSLLSRFDLLFIVLDNFDPTHDRRIGGHVLRMHRYR----NEDSQGAQDSSARSLHDFATFDQQSTVEEEAPIYVQYNQLLHAESMRKDESLFSTQFLKKYLLYAKHRVNPRITQEAAAYIAKAYSDLRAKEDMKTLPVTPRTLDAMLRLTVAHAKCRLSRVATEED 442
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: UPI000644B56E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B56E) HSP 1 Score: 226 bits (575), Expect = 1.250e-65 Identity = 118/198 (59.60%), Postives = 144/198 (72.73%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTDQALLGPQTASEAALYNSYD---DXXXXXXQPVYVQINRLLHGDRREGEIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLSSV 585 KAGIH +LNARCSV+AAANP+YGQYNR KKP +NI LPDSLLSRFDLLFIVLD+ NP HDR ISDH+LRMHRY+ G D++ QT + L D PVY + ++LLHG + E EI SIPF++KY+ +AK KP L EA YI +Y++LR KE+ KTLP+T RTLET+IRL+SAHAKCRLS + Sbjct: 461 KAGIHASLNARCSVVAAANPIYGQYNRYKKPHDNICLPDSLLSRFDLLFIVLDHANPDHDRHISDHILRMHRYKKQGEDESY--QQTEPSSILGGELDVKEQVEKDTDTPVYQKYDKLLHGGQAEREILSIPFIQKYIRFAKNLIKPSLSDEAKEYIVSSYTELRSKEEEKTLPITTRTLETLIRLSSAHAKCRLSPI 656
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: A0A2P6MT09_9EUKA (DNA replication licensing factor MCM3 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MT09_9EUKA) HSP 1 Score: 226 bits (575), Expect = 1.370e-65 Identity = 113/200 (56.50%), Postives = 142/200 (71.00%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTDQALLGPQTASEAALYNSYDDXXXXXXQPVYVQINRLLHGDRREGEIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLSSVTTADD 600 KAGIHT LNARCSV+AAANP+YGQYNRQKKPTENI LPDSLLSRFDLLFI LD NP HDR ISDHVLRMHRY+ ++ LG E +Y + + P+Y + ++ LHG R+ ++ S+ F+KKYL YAK KP L +A + I+ Y+ LR ++++KTLP+T R+LETMIRLA+AHAK RLS + D Sbjct: 454 KAGIHTMLNARCSVLAAANPIYGQYNRQKKPTENIALPDSLLSRFDLLFIFLDTLNPEHDRMISDHVLRMHRYKEENSNGEGLGENP--EDMMYADHQEDNSTTETPIYQRFDKTLHGHRKTKDVLSVQFIKKYLLYAKREIKPTLSEDACSVINTNYAQLRTRDNMKTLPITTRSLETMIRLATAHAKLRLSDIVEESD 651
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: D3B0M9_POLPP (DNA replication licensing factor MCM3 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B0M9_POLPP) HSP 1 Score: 223 bits (567), Expect = 1.310e-64 Identity = 119/206 (57.77%), Postives = 146/206 (70.87%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTDQA----------LLGPQTASEAALYNSYDDXXXXXXQ---PVYVQINRLLHGDRREGEIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLS 579 KAGIH +LNARCSV+AAANP+YGQYNR K+P ENI LPDSLLSRFDLLFIVLD NP HDR IS+H+LRMHRYR + +L QT + L D PVY ++++LLHG+R E EIFSIPF++KYL +AK R+KP+L EA +I +Y++LR KE KTLP+T RTLET+IRL++AHAKCRLS Sbjct: 458 KAGIHASLNARCSVVAAANPIYGQYNRYKRPHENICLPDSLLSRFDLLFIVLDQANPDHDRHISEHILRMHRYRRASDSETCFIKSNFKNCILDLQTEPSSILGGEMDIKQIVEEDLETPVYQKVDKLLHGER-ENEIFSIPFIQKYLHFAKSRTKPMLTDEAREFIISSYTELRSKEGEKTLPITTRTLETLIRLSTAHAKCRLS 662
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: A0A151ZFC3_9MYCE (DNA replication licensing factor MCM3 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZFC3_9MYCE) HSP 1 Score: 217 bits (552), Expect = 2.760e-62 Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTDQA---------LLGPQTASEAALYNSYDDXXXXXXQPVYVQINRLLHGDRREG--EIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLS 579 KAGIH +LNARCSV+AAANP+YGQYNR KKP +NIGLPDSLLSRFDLLFIVLDN N HDR+IS+HVLRMH YR GTD + +LG + + A + D PV+ + ++LLHG R+ EI ++PF++KY+ YAK R KP L +A +I +++++LR KE+ KTLP+T RTLETMIRL+ AHAKCRLS Sbjct: 455 KAGIHASLNARCSVVAAANPIYGQYNRYKKPHDNIGLPDSLLSRFDLLFIVLDNTNADHDRSISEHVLRMHMYRQPGTDSSSSIQVEQISVLGGELETLEAKPSDID-------VPVFQKFDKLLHGSMRDHHKEIVAVPFIQKYIYYAKSRVKPNLSQDAVEFIVESFTELRSKEEDKTLPITTRTLETMIRLSQAHAKCRLS 651
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: A0A8J4PXV4_9MYCE (DNA replication licensing factor MCM3 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PXV4_9MYCE) HSP 1 Score: 216 bits (551), Expect = 3.280e-62 Identity = 113/197 (57.36%), Postives = 140/197 (71.07%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTD--QALLGPQTASEAALYNSYDDXXXXXXQPVYVQINRLLHGDRREGEIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLSSV 585 KAGIH +LNARCSV+AAANPV+G+YNR KP ENI LPDSLLSRFDLLFIVLDN N HDR+IS H+LRMHRY VG++ ++L Q + + + P+Y + ++LLHG+R I SIPF++KYL YAK R P L EA +I +Y+ LR +ED KTLP+T RTLETMIRL+ AHAKCRLS + Sbjct: 456 KAGIHASLNARCSVVAAANPVFGRYNRHLKPHENISLPDSLLSRFDLLFIVLDNTNSEHDRSISSHILRMHRYHTVGSEYQNSILSEQISVLGGELDRFQIQDADQETPIYQKYDKLLHGNRDNTTIISIPFIQKYLYYAKNRIIPKLSEEAREFIIISYTQLRQREDEKTLPITTRTLETMIRLSHAHAKCRLSPI 652
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: F4PP09_CAVFA (DNA helicase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PP09_CAVFA) HSP 1 Score: 216 bits (551), Expect = 1.480e-61 Identity = 114/199 (57.29%), Postives = 141/199 (70.85%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGT-DQALLGPQTASEAALYNSYDDXXXXXXQ----PVYVQINRLLHGDRREGEIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLSS 582 KAGIH +LNARCSV+AAANPVYGQYNR KKP +NI LPDSLLSRFDLLFIVLD NP HDR IS+H+LRMHRYR G D + G ++ Q PVY + ++LLHG+ EI SIPFL+KY+ YAK + P L +A YI++++ +LR ++D KTLP+T RTLETMIRL++AHAKCRLS+ Sbjct: 980 KAGIHASLNARCSVVAAANPVYGQYNRHKKPHDNIALPDSLLSRFDLLFIVLDQANPDHDRLISEHILRMHRYRTPGELDMVIHGEHSSVLGGEMEPVAQSGTISTQGEETPVYQKYDKLLHGNHGATEILSIPFLQKYIYYAKQKFVPKLTDQAKDYITQSFVELRSRDDEKTLPITTRTLETMIRLSTAHAKCRLSN 1178
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: F1A0B0_DICPU (DNA replication licensing factor MCM3 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A0B0_DICPU) HSP 1 Score: 209 bits (533), Expect = 7.270e-60 Identity = 111/201 (55.22%), Postives = 138/201 (68.66%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTDQ---------ALLGPQTASEAALYNSYDDXXXXXXQPVYVQINRLLHGDRREGEIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRL 576 KAGIH +LNARCSV+AAANP+YG+YN K NIGLPDSLLSRFDLLFIVLDN NP HDR ISDHVLRMHRY+ G + + LG + ++ + NS D P++ + NR LHG+ + +I SIPF++KY+ YAK KP L +A YI + Y+DLR K+ +LP+T RTLETMIRL+ AHAKCRL Sbjct: 447 KAGIHASLNARCSVVAAANPIYGKYNPDLKAHTNIGLPDSLLSRFDLLFIVLDNVNPDHDRMISDHVLRMHRYKDEGAEMETFLQSEQISTLGGELSNGLSKNNSNADIDT----PIFQKYNRTLHGNEKSYDIVSIPFIQKYIHYAKTIIKPKLSEDARKYIIEQYTDLRSKQTNNSLPITTRTLETMIRLSQAHAKCRL 643
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: L8GNZ1_ACACA (DNA replication licensing factor MCM3 (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GNZ1_ACACA) HSP 1 Score: 207 bits (528), Expect = 2.970e-59 Identity = 109/205 (53.17%), Postives = 141/205 (68.78%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTDQALLGPQTASEAALYNSYDDXXXXXXQPVYVQINRLLHGDRREG-----EIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLSSVTTADD 600 KAGIHT+LNARCSV+AAANP YGQYNR KKP+ENI LPDSLLSRFDLLFIVLD NP HDR+I++HVLR H YRP G + + L + + Q + LH ++EG +++++ F+KKY+ YAK R +P L+ +A YI++ Y+ LR K D++T PVTARTLET+IRL++AHAKCRLS T +D Sbjct: 392 KAGIHTSLNARCSVLAAANPAYGQYNRHKKPSENIRLPDSLLSRFDLLFIVLDELNPAHDRSITEHVLRSHMYRPPGELEGTPLDMSDGHHDLMSELSAHREDVVETPMFQKHNPLHRRKKEGGEEKRQLYTMEFIKKYIIYAKNRFQPQLMDDAEDYIAEEYTKLRGKMDVRTQPVTARTLETLIRLSAAHAKCRLSHEVTRED 596
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Match: Q54VI9_DICDI (DNA replication licensing factor MCM3 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54VI9_DICDI) HSP 1 Score: 204 bits (519), Expect = 9.250e-58 Identity = 108/208 (51.92%), Postives = 141/208 (67.79%), Query Frame = 1 Query: 1 KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIVLDNFNPVHDRTISDHVLRMHRYRPVGTD-QALLGPQTAS-------EAALYNSYDDXXXXXXQPVYVQINRLLHGDRREGEIFSIPFLKKYLSYAKYRSKPVLLPEAAAYISKAYSDLRCKEDLKTLPVTARTLETMIRLASAHAKCRLSSVTTADD 600 KAGIH +LNARCSV+AAANP+YG+YN K NIGLPDSLLSRFDLLFIVLD NP HDR I++HVLRMHRY+ G++ +++LG + S + + D PV+ + N+LLHG + +I SIPF++KY+ YAK KP L EA YI + Y+++R K+ ++P+T R+LETMIRL+ AHAKCRL T DD Sbjct: 449 KAGIHASLNARCSVVAAANPIYGKYNPDLKAHTNIGLPDSLLSRFDLLFIVLDGINPDHDRMIAEHVLRMHRYKDEGSELESMLGSEQISTLGGEFKNVSTVKTTSDLDT----PVFQKYNKLLHGAENKSDIVSIPFIQKYIFYAKTLFKPRLTDEAREYIIEKYTEMRSKQTPNSIPITTRSLETMIRLSQAHAKCRLDHNVTVDD 652 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95591.22037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95591.22037.1 >prot_M-pyrifera_M_contig95591.22037.1 ID=prot_M-pyrifera_M_contig95591.22037.1|Name=mRNA_M-pyrifera_M_contig95591.22037.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp KAGIHTTLNARCSVMAAANPVYGQYNRQKKPTENIGLPDSLLSRFDLLFIback to top mRNA from alignment at M-pyrifera_M_contig95591:11..714- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95591.22037.1 ID=mRNA_M-pyrifera_M_contig95591.22037.1|Name=mRNA_M-pyrifera_M_contig95591.22037.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=704bp|location=Sequence derived from alignment at M-pyrifera_M_contig95591:11..714- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95591:11..714- >mRNA_M-pyrifera_M_contig95591.22037.1 ID=mRNA_M-pyrifera_M_contig95591.22037.1|Name=mRNA_M-pyrifera_M_contig95591.22037.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig95591:11..714- (Macrocystis pyrifera P11B4 male)back to top |