mRNA_M-pyrifera_M_contig95551.22029.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: UPI000719AE7D (long-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AE7D) HSP 1 Score: 198 bits (504), Expect = 8.760e-61 Identity = 99/205 (48.29%), Postives = 140/205 (68.29%), Query Frame = 1 Query: 7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621 RP Q+ KLT +GTR IF+ EHD++R++VR+F E ++P H++WE DG V REVW AGE GLL + EEGG+G+ L S IV +EQ Y G +GP ++LHSD+++PY+ + + +++ +G+ + AIAMTEPGAGSDL+G++T A DGD W+L+G KVFI+NG +AD VIV AVT + +SLFLV+ Sbjct: 3 RPEPGQSEKLTDIGTRRIFSDEHDLFRKNVRRFFQEEVMPYHDQWEIDGQVSREVWEKAGEAGLLGVST---PAEEGGIGSDILTSSIVWDEQGYSGASGPGWALHSDIVMPYICHYGTTEQKEKFLPAMTAGKKIGAIAMTEPGAGSDLQGIKTNAKKDGDGWILNGSKVFITNGHMADVVIVVAVTDPTAKSAARGISLFLVE 204
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A813CNB7_9DINO (Acadl protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CNB7_9DINO) HSP 1 Score: 205 bits (521), Expect = 3.430e-60 Identity = 99/206 (48.06%), Postives = 139/206 (67.48%), Query Frame = 1 Query: 7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624 RP ++QA K+T +GTR IF +HD++R VRK+ ++P H +WE G VPR++W +AGE+GLLC+ E GG L + I EEQ+Y G TGP F+LHS+++ PY+ + +D ++++ R SG+ + AIAMTEPGAGSDL+G+RT AV DGDDW+L+G K FI+NG + D VIV A T + + +SLFLVDA Sbjct: 112 RPEVMQAPKMTDIGTRRIFNEDHDMFRSMVRKWWEAEVVPHHSKWEEAGEVPRDLWKSAGENGLLCVTM---PEEMGGSAADALHAAITWEEQSYTGCTGPGFALHSEIVAPYLLHYGTDEQKAQYLPRMASGDCITAIAMTEPGAGSDLQGIRTTAVQDGDDWILNGSKTFITNGWLCDMVIVVAKTDASAEKAAHGISLFLVDA 314
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A8C1Z353_CYPCA (Acyl-CoA dehydrogenase long chain n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1Z353_CYPCA) HSP 1 Score: 198 bits (503), Expect = 4.300e-59 Identity = 102/208 (49.04%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 1 PMRPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624 P RP A L +GTR IF+ EHD++R++VR+F E ++P H +WE G V REVW AGEHGLL I E GG+G + IV EEQ Y TGP FSLHS++++PY+ + S A ++ + +G+ + AIAMTEPGAGSDL+G++T A DG DW+L+G KVFISNG ++D VIVAAVT + + +SLFLVD+ Sbjct: 14 PFRPETPMAKTLMDIGTRRIFSEEHDLFRKNVRRFFQEEVVPYHAQWEKAGEVSREVWKKAGEHGLLGI---YTPEEHGGIGGDLFSAAIVWEEQMYCNCTGPGFSLHSEIVMPYISHYGSKAQIEHYIPQMTAGKYIGAIAMTEPGAGSDLQGMKTFAKKDGTDWILNGSKVFISNGWISDMVIVAAVTNREAKKVAHGISLFLVDS 218
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A7L2X1X6_PANHA (ACADL protein (Fragment) n=1 Tax=Pandion haliaetus TaxID=56262 RepID=A0A7L2X1X6_PANHA) HSP 1 Score: 194 bits (493), Expect = 4.300e-59 Identity = 101/206 (49.03%), Postives = 137/206 (66.50%), Query Frame = 1 Query: 7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEE-GGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621 RP A LT +GTR IF+++HD++RES RKF E +LP H WE DG V RE+W AG+ GLL G+ E+ GG+G L S +V EEQ Y TGP FSLHSD+++PY+ ++ S+ ++ +G+ + AIAMTEPGAGSDL+G+RT A DG+DW+L+G KVFI+NG ++D VIV AVT + +SLFLV+ Sbjct: 12 RPEPSSAKSLTDIGTRRIFSSDHDIFRESARKFFQEEVLPFHTEWEKDGQVSRELWEKAGQQGLL----GVAIAEKHGGIGADILSSAVVWEEQMYVNCTGPGFSLHSDIVMPYIANYGSEEQIKRFIPEMVAGKCIGAIAMTEPGAGSDLQGIRTYAKKDGNDWILNGSKVFITNGWMSDVVIVVAVTNREARSPAHGISLFLVE 213
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: UPI001E1DC9DB (long-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC9DB) HSP 1 Score: 200 bits (508), Expect = 4.830e-59 Identity = 97/205 (47.32%), Postives = 139/205 (67.80%), Query Frame = 1 Query: 7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621 RP + Q+SKLT +GTR IF+ EHD++R+SVR+F E +LP H WE +G V REVW AGE+GLL ++ E GG+G L + + EEQ Y +GP F+LHSD+++PY+ + + +++ +G+ + AIAMTEPGAGSDL+G+RT A DGDDW+L+G KVFI+NG ++D V+V A+T + +SLFLV+ Sbjct: 30 RPEVQQSSKLTDIGTRKIFSEEHDIFRQSVRRFFEEEVLPYHSEWEKNGQVSREVWEKAGENGLLGVNT---PAEIGGIGGDVLSTAVTWEEQMYANCSGPGFALHSDIVMPYISHYGTKEQIEKFIPAMTAGKCIGAIAMTEPGAGSDLQGIRTNAKQDGDDWILNGSKVFITNGYMSDLVLVVAITNPQAKSVAHGISLFLVE 231
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: UPI0015AC99BA (long-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AC99BA) HSP 1 Score: 199 bits (505), Expect = 2.070e-58 Identity = 103/210 (49.05%), Postives = 137/210 (65.24%), Query Frame = 1 Query: 1 PMRPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLL--CIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624 P RP A L +GTR IF+ EHD++R++VR+F E ++P H WE G V RE+W AG GLL CI E E+GGVG L + +V EEQ Y +GP FSLHSD+I+PY+ + + A ++ + +G+ +AAIAMTEPGAGSDL+G+RT A DG DW+L+G KVFISNG ++D V+V AVT + +SLFLVDA Sbjct: 46 PFRPETASARTLMDIGTRRIFSEEHDLFRQNVRRFFQEEVVPHHSEWEKAGEVSRELWEKAGMQGLLAICIPE-----EQGGVGGDLLSAAVVWEEQMYCNCSGPGFSLHSDIIMPYISHYGTPAQIERYIPQLTAGKCIAAIAMTEPGAGSDLQGVRTYAKRDGSDWILNGNKVFISNGWMSDVVVVVAVTNPEAKTVAHGISLFLVDA 250
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: UPI00201428BF (long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X2 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI00201428BF) HSP 1 Score: 196 bits (498), Expect = 9.900e-58 Identity = 101/208 (48.56%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 1 PMRPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624 P RP A L +GTR IF+ EHD++R++VR+F E ++P H +WE G V REVW AGEHGLL I E GG+G L + IV EEQ Y +GP FSLHS++I+PY+ + S A ++ + +G+ + AIAMTEP AGSDL+G++T A DG DW+L+G KVFI+NG ++D VIV AVT + +SLFLVDA Sbjct: 45 PFRPETPMAKTLMDIGTRRIFSEEHDLFRQNVRRFFQEEVVPHHTQWEKAGEVSREVWEKAGEHGLLGI---FTPEEHGGIGGDLLSAAIVWEEQMYCNCSGPGFSLHSEIIMPYISHYGSKAQIEHYIPQMTAGKCIGAIAMTEPAAGSDLQGVKTYAKKDGTDWILNGSKVFITNGWMSDVVIVVAVTNREAKTAAHGISLFLVDA 249
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A8J1TMG1_OWEFU (Long-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TMG1_OWEFU) HSP 1 Score: 197 bits (500), Expect = 1.260e-57 Identity = 101/206 (49.03%), Postives = 138/206 (66.99%), Query Frame = 1 Query: 7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624 RP + Q + L +GTR I + D++RE+VR+F E + P H +WE DG V RE+WL AGE GLL ++ E GG+G ++S+IV EEQ Y +GP F LHSDV++PY+R F + +++ +G+ + AIAMTEPGAGSDL+G+RT AV DGDDW+L+G KVFI+NG ++D VIV AVT + +SLFLVDA Sbjct: 54 RPEVGQVNNLMDIGTRRILDEDKDLFRENVRRFFTEEVSPYHAQWEKDGQVSRELWLKAGEQGLLGVNT---PAEVGGIGGDFIDSMIVLEEQCYSNCSGPGFILHSDVVMPYLRHFGTKEQLEKYIPDMVAGKKIGAIAMTEPGAGSDLQGIRTNAVKDGDDWILNGSKVFITNGFMSDVVIVVAVTNTEAKSKAHGISLFLVDA 256
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A5N3WFC6_MUNMU (Long-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Muntiacus muntjak TaxID=9888 RepID=A0A5N3WFC6_MUNMU) HSP 1 Score: 196 bits (497), Expect = 2.430e-57 Identity = 100/199 (50.25%), Postives = 133/199 (66.83%), Query Frame = 1 Query: 25 ASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621 A KLT +GTR IF+ EHD++RESVRKF E ++P H WE G V RE+W AG+ GLL I+ + D GG+G S IV EEQAY TGP FSLHSD+++PY+ ++ S+ ++ +G+ + AIAMTEPGAGSDL+G+RT A DG DW+L+G KVF+SNG + D VIV A+T + +SLFLV+ Sbjct: 42 AKKLTDIGTRRIFSLEHDIFRESVRKFFQEEVIPYHAEWEKAGEVSRELWEKAGKQGLLGIN--IAD-RHGGIGGDLFSSAIVWEEQAYSNCTGPGFSLHSDIVIPYIANYGSEEQIKRFIPEMVAGKCIGAIAMTEPGAGSDLQGIRTNAKKDGSDWILNGSKVFVSNGWLCDVVIVVAITNREARSPARGISLFLVE 237
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A8C9P7G6_SPEDA (Long-chain specific acyl-CoA dehydrogenase, mitochondrial n=2 Tax=Marmotini TaxID=337730 RepID=A0A8C9P7G6_SPEDA) HSP 1 Score: 195 bits (495), Expect = 2.520e-57 Identity = 98/199 (49.25%), Postives = 134/199 (67.34%), Query Frame = 1 Query: 25 ASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621 A KLT VG R IF++EHD++RESVRKF E ++P H WE G VPRE+W AG+ GLL ++ + GG+G + IV EEQAY TGP FSLHSD+++PY+ ++ S ++ + +G+ + AIAMTEPGAGSDL+G+RT A DG DW+L+G KVFI+NG ++D VIV A+T + +SLFLV+ Sbjct: 15 AKKLTDVGIRRIFSSEHDIFRESVRKFFQEEVVPHHSEWEKAGEVPRELWEKAGKQGLLGVNIAE---QHGGIGGDLYSTAIVWEEQAYSNCTGPGFSLHSDIVMPYIANYGSKEQIEHFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKKDGSDWILNGSKVFITNGWLSDVVIVVAITNREARSPAHGISLFLVE 210 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95551.22029.1 >prot_M-pyrifera_M_contig95551.22029.1 ID=prot_M-pyrifera_M_contig95551.22029.1|Name=mRNA_M-pyrifera_M_contig95551.22029.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp MRPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGback to top mRNA from alignment at M-pyrifera_M_contig95551:27..650- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95551.22029.1 ID=mRNA_M-pyrifera_M_contig95551.22029.1|Name=mRNA_M-pyrifera_M_contig95551.22029.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig95551:27..650- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95551:27..650- >mRNA_M-pyrifera_M_contig95551.22029.1 ID=mRNA_M-pyrifera_M_contig95551.22029.1|Name=mRNA_M-pyrifera_M_contig95551.22029.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig95551:27..650- (Macrocystis pyrifera P11B4 male)back to top |