mRNA_M-pyrifera_M_contig95551.22029.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95551.22029.1
Unique NamemRNA_M-pyrifera_M_contig95551.22029.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: UPI000719AE7D (long-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AE7D)

HSP 1 Score: 198 bits (504), Expect = 8.760e-61
Identity = 99/205 (48.29%), Postives = 140/205 (68.29%), Query Frame = 1
Query:    7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621
            RP   Q+ KLT +GTR IF+ EHD++R++VR+F  E ++P H++WE DG V REVW  AGE GLL +       EEGG+G+  L S IV +EQ Y G +GP ++LHSD+++PY+  + +     +++    +G+ + AIAMTEPGAGSDL+G++T A  DGD W+L+G KVFI+NG +AD VIV AVT       +  +SLFLV+
Sbjct:    3 RPEPGQSEKLTDIGTRRIFSDEHDLFRKNVRRFFQEEVMPYHDQWEIDGQVSREVWEKAGEAGLLGVST---PAEEGGIGSDILTSSIVWDEQGYSGASGPGWALHSDIVMPYICHYGTTEQKEKFLPAMTAGKKIGAIAMTEPGAGSDLQGIKTNAKKDGDGWILNGSKVFITNGHMADVVIVVAVTDPTAKSAARGISLFLVE 204          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A813CNB7_9DINO (Acadl protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CNB7_9DINO)

HSP 1 Score: 205 bits (521), Expect = 3.430e-60
Identity = 99/206 (48.06%), Postives = 139/206 (67.48%), Query Frame = 1
Query:    7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624
            RP ++QA K+T +GTR IF  +HD++R  VRK+    ++P H +WE  G VPR++W +AGE+GLLC+       E GG     L + I  EEQ+Y G TGP F+LHS+++ PY+  + +D   ++++ R  SG+ + AIAMTEPGAGSDL+G+RT AV DGDDW+L+G K FI+NG + D VIV A T     + +  +SLFLVDA
Sbjct:  112 RPEVMQAPKMTDIGTRRIFNEDHDMFRSMVRKWWEAEVVPHHSKWEEAGEVPRDLWKSAGENGLLCVTM---PEEMGGSAADALHAAITWEEQSYTGCTGPGFALHSEIVAPYLLHYGTDEQKAQYLPRMASGDCITAIAMTEPGAGSDLQGIRTTAVQDGDDWILNGSKTFITNGWLCDMVIVVAKTDASAEKAAHGISLFLVDA 314          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A8C1Z353_CYPCA (Acyl-CoA dehydrogenase long chain n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1Z353_CYPCA)

HSP 1 Score: 198 bits (503), Expect = 4.300e-59
Identity = 102/208 (49.04%), Postives = 137/208 (65.87%), Query Frame = 1
Query:    1 PMRPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624
            P RP    A  L  +GTR IF+ EHD++R++VR+F  E ++P H +WE  G V REVW  AGEHGLL I       E GG+G     + IV EEQ Y   TGP FSLHS++++PY+  + S A    ++ +  +G+ + AIAMTEPGAGSDL+G++T A  DG DW+L+G KVFISNG ++D VIVAAVT     + +  +SLFLVD+
Sbjct:   14 PFRPETPMAKTLMDIGTRRIFSEEHDLFRKNVRRFFQEEVVPYHAQWEKAGEVSREVWKKAGEHGLLGI---YTPEEHGGIGGDLFSAAIVWEEQMYCNCTGPGFSLHSEIVMPYISHYGSKAQIEHYIPQMTAGKYIGAIAMTEPGAGSDLQGMKTFAKKDGTDWILNGSKVFISNGWISDMVIVAAVTNREAKKVAHGISLFLVDS 218          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A7L2X1X6_PANHA (ACADL protein (Fragment) n=1 Tax=Pandion haliaetus TaxID=56262 RepID=A0A7L2X1X6_PANHA)

HSP 1 Score: 194 bits (493), Expect = 4.300e-59
Identity = 101/206 (49.03%), Postives = 137/206 (66.50%), Query Frame = 1
Query:    7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEE-GGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621
            RP    A  LT +GTR IF+++HD++RES RKF  E +LP H  WE DG V RE+W  AG+ GLL    G+   E+ GG+G   L S +V EEQ Y   TGP FSLHSD+++PY+ ++ S+     ++    +G+ + AIAMTEPGAGSDL+G+RT A  DG+DW+L+G KVFI+NG ++D VIV AVT       +  +SLFLV+
Sbjct:   12 RPEPSSAKSLTDIGTRRIFSSDHDIFRESARKFFQEEVLPFHTEWEKDGQVSRELWEKAGQQGLL----GVAIAEKHGGIGADILSSAVVWEEQMYVNCTGPGFSLHSDIVMPYIANYGSEEQIKRFIPEMVAGKCIGAIAMTEPGAGSDLQGIRTYAKKDGNDWILNGSKVFITNGWMSDVVIVVAVTNREARSPAHGISLFLVE 213          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: UPI001E1DC9DB (long-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC9DB)

HSP 1 Score: 200 bits (508), Expect = 4.830e-59
Identity = 97/205 (47.32%), Postives = 139/205 (67.80%), Query Frame = 1
Query:    7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621
            RP + Q+SKLT +GTR IF+ EHD++R+SVR+F  E +LP H  WE +G V REVW  AGE+GLL ++      E GG+G   L + +  EEQ Y   +GP F+LHSD+++PY+  + +     +++    +G+ + AIAMTEPGAGSDL+G+RT A  DGDDW+L+G KVFI+NG ++D V+V A+T       +  +SLFLV+
Sbjct:   30 RPEVQQSSKLTDIGTRKIFSEEHDIFRQSVRRFFEEEVLPYHSEWEKNGQVSREVWEKAGENGLLGVNT---PAEIGGIGGDVLSTAVTWEEQMYANCSGPGFALHSDIVMPYISHYGTKEQIEKFIPAMTAGKCIGAIAMTEPGAGSDLQGIRTNAKQDGDDWILNGSKVFITNGYMSDLVLVVAITNPQAKSVAHGISLFLVE 231          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: UPI0015AC99BA (long-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AC99BA)

HSP 1 Score: 199 bits (505), Expect = 2.070e-58
Identity = 103/210 (49.05%), Postives = 137/210 (65.24%), Query Frame = 1
Query:    1 PMRPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLL--CIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624
            P RP    A  L  +GTR IF+ EHD++R++VR+F  E ++P H  WE  G V RE+W  AG  GLL  CI E     E+GGVG   L + +V EEQ Y   +GP FSLHSD+I+PY+  + + A    ++ +  +G+ +AAIAMTEPGAGSDL+G+RT A  DG DW+L+G KVFISNG ++D V+V AVT       +  +SLFLVDA
Sbjct:   46 PFRPETASARTLMDIGTRRIFSEEHDLFRQNVRRFFQEEVVPHHSEWEKAGEVSRELWEKAGMQGLLAICIPE-----EQGGVGGDLLSAAVVWEEQMYCNCSGPGFSLHSDIIMPYISHYGTPAQIERYIPQLTAGKCIAAIAMTEPGAGSDLQGVRTYAKRDGSDWILNGNKVFISNGWMSDVVVVVAVTNPEAKTVAHGISLFLVDA 250          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: UPI00201428BF (long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X2 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI00201428BF)

HSP 1 Score: 196 bits (498), Expect = 9.900e-58
Identity = 101/208 (48.56%), Postives = 135/208 (64.90%), Query Frame = 1
Query:    1 PMRPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624
            P RP    A  L  +GTR IF+ EHD++R++VR+F  E ++P H +WE  G V REVW  AGEHGLL I       E GG+G   L + IV EEQ Y   +GP FSLHS++I+PY+  + S A    ++ +  +G+ + AIAMTEP AGSDL+G++T A  DG DW+L+G KVFI+NG ++D VIV AVT       +  +SLFLVDA
Sbjct:   45 PFRPETPMAKTLMDIGTRRIFSEEHDLFRQNVRRFFQEEVVPHHTQWEKAGEVSREVWEKAGEHGLLGI---FTPEEHGGIGGDLLSAAIVWEEQMYCNCSGPGFSLHSEIIMPYISHYGSKAQIEHYIPQMTAGKCIGAIAMTEPAAGSDLQGVKTYAKKDGTDWILNGSKVFITNGWMSDVVIVVAVTNREAKTAAHGISLFLVDA 249          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A8J1TMG1_OWEFU (Long-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TMG1_OWEFU)

HSP 1 Score: 197 bits (500), Expect = 1.260e-57
Identity = 101/206 (49.03%), Postives = 138/206 (66.99%), Query Frame = 1
Query:    7 RPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVDA 624
            RP + Q + L  +GTR I   + D++RE+VR+F  E + P H +WE DG V RE+WL AGE GLL ++      E GG+G   ++S+IV EEQ Y   +GP F LHSDV++PY+R F +     +++    +G+ + AIAMTEPGAGSDL+G+RT AV DGDDW+L+G KVFI+NG ++D VIV AVT       +  +SLFLVDA
Sbjct:   54 RPEVGQVNNLMDIGTRRILDEDKDLFRENVRRFFTEEVSPYHAQWEKDGQVSRELWLKAGEQGLLGVNT---PAEVGGIGGDFIDSMIVLEEQCYSNCSGPGFILHSDVVMPYLRHFGTKEQLEKYIPDMVAGKKIGAIAMTEPGAGSDLQGIRTNAVKDGDDWILNGSKVFITNGFMSDVVIVVAVTNTEAKSKAHGISLFLVDA 256          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A5N3WFC6_MUNMU (Long-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Muntiacus muntjak TaxID=9888 RepID=A0A5N3WFC6_MUNMU)

HSP 1 Score: 196 bits (497), Expect = 2.430e-57
Identity = 100/199 (50.25%), Postives = 133/199 (66.83%), Query Frame = 1
Query:   25 ASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621
            A KLT +GTR IF+ EHD++RESVRKF  E ++P H  WE  G V RE+W  AG+ GLL I+  + D   GG+G     S IV EEQAY   TGP FSLHSD+++PY+ ++ S+     ++    +G+ + AIAMTEPGAGSDL+G+RT A  DG DW+L+G KVF+SNG + D VIV A+T       +  +SLFLV+
Sbjct:   42 AKKLTDIGTRRIFSLEHDIFRESVRKFFQEEVIPYHAEWEKAGEVSRELWEKAGKQGLLGIN--IAD-RHGGIGGDLFSSAIVWEEQAYSNCTGPGFSLHSDIVIPYIANYGSEEQIKRFIPEMVAGKCIGAIAMTEPGAGSDLQGIRTNAKKDGSDWILNGSKVFVSNGWLCDVVIVVAITNREARSPARGISLFLVE 237          
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Match: A0A8C9P7G6_SPEDA (Long-chain specific acyl-CoA dehydrogenase, mitochondrial n=2 Tax=Marmotini TaxID=337730 RepID=A0A8C9P7G6_SPEDA)

HSP 1 Score: 195 bits (495), Expect = 2.520e-57
Identity = 98/199 (49.25%), Postives = 134/199 (67.34%), Query Frame = 1
Query:   25 ASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADGVVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVTGPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSDLRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTLSLFLVD 621
            A KLT VG R IF++EHD++RESVRKF  E ++P H  WE  G VPRE+W  AG+ GLL ++      + GG+G     + IV EEQAY   TGP FSLHSD+++PY+ ++ S      ++ +  +G+ + AIAMTEPGAGSDL+G+RT A  DG DW+L+G KVFI+NG ++D VIV A+T       +  +SLFLV+
Sbjct:   15 AKKLTDVGIRRIFSSEHDIFRESVRKFFQEEVVPHHSEWEKAGEVPRELWEKAGKQGLLGVNIAE---QHGGIGGDLYSTAIVWEEQAYSNCTGPGFSLHSDIVMPYIANYGSKEQIEHFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKKDGSDWILNGSKVFITNGWLSDVVIVVAITNREARSPAHGISLFLVE 210          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95551.22029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000719AE7D8.760e-6148.29long-chain specific acyl-CoA dehydrogenase, mitoch... [more]
A0A813CNB7_9DINO3.430e-6048.06Acadl protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A8C1Z353_CYPCA4.300e-5949.04Acyl-CoA dehydrogenase long chain n=1 Tax=Cyprinus... [more]
A0A7L2X1X6_PANHA4.300e-5949.03ACADL protein (Fragment) n=1 Tax=Pandion haliaetus... [more]
UPI001E1DC9DB4.830e-5947.32long-chain specific acyl-CoA dehydrogenase, mitoch... [more]
UPI0015AC99BA2.070e-5849.05long-chain specific acyl-CoA dehydrogenase, mitoch... [more]
UPI00201428BF9.900e-5848.56long-chain specific acyl-CoA dehydrogenase, mitoch... [more]
A0A8J1TMG1_OWEFU1.260e-5749.03Long-chain specific acyl-CoA dehydrogenase, mitoch... [more]
A0A5N3WFC6_MUNMU2.430e-5750.25Long-chain specific acyl-CoA dehydrogenase, mitoch... [more]
A0A8C9P7G6_SPEDA2.520e-5749.25Long-chain specific acyl-CoA dehydrogenase, mitoch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95551contigM-pyrifera_M_contig95551:27..650 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score196.1
Seed ortholog evalue1.7e-47
Seed eggNOG ortholog51511.ENSCSAVP00000009023
Preferred nameACADL
KEGG rclassRC00052
KEGG koko:K00255
KEGG ReactionR01279,R03777,R03857,R03990,R04751,R04754
KEGG Pathwayko00071,ko01100,ko01212,ko03320,map00071,map01100,map01212,map03320
KEGG ModuleM00087
Hectar predicted targeting categoryother localisation
GOsGO:0000062,GO:0000166,GO:0001659,GO:0001676,GO:0003674,GO:0003824,GO:0003995,GO:0003997,GO:0004466,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005759,GO:0006082,GO:0006575,GO:0006577,GO:0006579,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009266,GO:0009409,GO:0009437,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016401,GO:0016491,GO:0016627,GO:0016634,GO:0017076,GO:0019216,GO:0019217,GO:0019218,GO:0019222,GO:0019254,GO:0019395,GO:0019752,GO:0022607,GO:0030258,GO:0030554,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032501,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033218,GO:0033539,GO:0034440,GO:0034641,GO:0036094,GO:0042219,GO:0042304,GO:0042413,GO:0042592,GO:0042758,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044270,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046320,GO:0046322,GO:0046395,GO:0046890,GO:0048037,GO:0048519,GO:0048523,GO:0048871,GO:0050660,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051055,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0072329,GO:0080090,GO:0090181,GO:0097159,GO:0097164,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901567,GO:1901575,GO:1901681
EggNOG free text desc.carnitine catabolic process
EggNOG OGs38EIK@33154,3BCNP@33208,3CUQJ@33213,480QF@7711,COG1960@1,KOG0141@2759
EC1.3.8.8
COG Functional cat.I
Best tax levelChordata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size624
Cds size621
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816869.3569224-CDS-M-pyrifera_M_contig95551:26..6471622816869.3569224-CDS-M-pyrifera_M_contig95551:26..647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95551 27..647 -
1692278226.2547917-CDS-M-pyrifera_M_contig95551:26..6471692278226.2547917-CDS-M-pyrifera_M_contig95551:26..647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95551 27..647 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816869.3703163-UTR-M-pyrifera_M_contig95551:647..6501622816869.3703163-UTR-M-pyrifera_M_contig95551:647..650Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig95551 648..650 -
1692278226.27329-UTR-M-pyrifera_M_contig95551:647..6501692278226.27329-UTR-M-pyrifera_M_contig95551:647..650Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig95551 648..650 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95551.22029.1prot_M-pyrifera_M_contig95551.22029.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95551 27..647 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95551.22029.1

>prot_M-pyrifera_M_contig95551.22029.1 ID=prot_M-pyrifera_M_contig95551.22029.1|Name=mRNA_M-pyrifera_M_contig95551.22029.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp
MRPSILQASKLTSVGTRSIFAAEHDVWRESVRKFCNEVLLPDHERWEADG
VVPREVWLAAGEHGLLCIDEGLGDGEEGGVGNGGLESLIVGEEQAYWGVT
GPSFSLHSDVIVPYVRSFASDALASEWMGRFRSGEAVAAIAMTEPGAGSD
LRGLRTRAVADGDDWVLHGEKVFISNGRVADAVIVAAVTGDIGSRGSDTL
SLFLVDA
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mRNA from alignment at M-pyrifera_M_contig95551:27..650-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95551.22029.1 ID=mRNA_M-pyrifera_M_contig95551.22029.1|Name=mRNA_M-pyrifera_M_contig95551.22029.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig95551:27..650- (Macrocystis pyrifera P11B4 male)
CCCATGCGTCCATCAATCTTACAGGCATCAAAACTTACATCTGTAGGAAC ACGTTCTATCTTTGCTGCTGAACACGACGTATGGCGAGAAAGTGTTAGGA AATTTTGCAACGAAGTTCTATTGCCGGATCATGAGCGTTGGGAGGCAGAT GGGGTAGTGCCTCGGGAAGTTTGGCTCGCAGCTGGCGAGCATGGGTTGCT TTGCATCGATGAAGGGCTTGGAGATGGAGAAGAAGGCGGGGTTGGGAATG GGGGTTTGGAAAGCTTGATCGTTGGGGAGGAGCAGGCGTATTGGGGAGTG ACTGGTCCATCGTTTTCATTGCATTCTGATGTTATTGTGCCATATGTCCG ATCATTTGCATCGGATGCGCTGGCAAGCGAATGGATGGGGCGATTTCGTA GTGGTGAAGCAGTTGCGGCGATTGCGATGACAGAACCAGGTGCAGGGAGC GATTTGCGTGGGTTGCGAACACGTGCAGTAGCTGATGGAGATGATTGGGT GTTGCATGGAGAAAAAGTTTTCATATCAAACGGAAGGGTAGCTGATGCAG TGATCGTGGCAGCTGTCACTGGTGACATTGGAAGTAGAGGGTCGGATACT CTTTCACTATTCTTGGTGGATGCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95551:27..650-

>mRNA_M-pyrifera_M_contig95551.22029.1 ID=mRNA_M-pyrifera_M_contig95551.22029.1|Name=mRNA_M-pyrifera_M_contig95551.22029.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig95551:27..650- (Macrocystis pyrifera P11B4 male)
ATGCGTCCATCAATCTTACAGGCATCAAAACTTACATCTGTAGGAACACG
TTCTATCTTTGCTGCTGAACACGACGTATGGCGAGAAAGTGTTAGGAAAT
TTTGCAACGAAGTTCTATTGCCGGATCATGAGCGTTGGGAGGCAGATGGG
GTAGTGCCTCGGGAAGTTTGGCTCGCAGCTGGCGAGCATGGGTTGCTTTG
CATCGATGAAGGGCTTGGAGATGGAGAAGAAGGCGGGGTTGGGAATGGGG
GTTTGGAAAGCTTGATCGTTGGGGAGGAGCAGGCGTATTGGGGAGTGACT
GGTCCATCGTTTTCATTGCATTCTGATGTTATTGTGCCATATGTCCGATC
ATTTGCATCGGATGCGCTGGCAAGCGAATGGATGGGGCGATTTCGTAGTG
GTGAAGCAGTTGCGGCGATTGCGATGACAGAACCAGGTGCAGGGAGCGAT
TTGCGTGGGTTGCGAACACGTGCAGTAGCTGATGGAGATGATTGGGTGTT
GCATGGAGAAAAAGTTTTCATATCAAACGGAAGGGTAGCTGATGCAGTGA
TCGTGGCAGCTGTCACTGGTGACATTGGAAGTAGAGGGTCGGATACTCTT
TCACTATTCTTGGTGGATGCAATGCGTCCATCAATCTTACAGGCATCAAA
ACTTACATCTGTAGGAACACGTTCTATCTTTGCTGCTGAACACGACGTAT
GGCGAGAAAGTGTTAGGAAATTTTGCAACGAAGTTCTATTGCCGGATCAT
GAGCGTTGGGAGGCAGATGGGGTAGTGCCTCGGGAAGTTTGGCTCGCAGC
TGGCGAGCATGGGTTGCTTTGCATCGATGAAGGGCTTGGAGATGGAGAAG
AAGGCGGGGTTGGGAATGGGGGTTTGGAAAGCTTGATCGTTGGGGAGGAG
CAGGCGTATTGGGGAGTGACTGGTCCATCGTTTTCATTGCATTCTGATGT
TATTGTGCCATATGTCCGATCATTTGCATCGGATGCGCTGGCAAGCGAAT
GGATGGGGCGATTTCGTAGTGGTGAAGCAGTTGCGGCGATTGCGATGACA
GAACCAGGTGCAGGGAGCGATTTGCGTGGGTTGCGAACACGTGCAGTAGC
TGATGGAGATGATTGGGTGTTGCATGGAGAAAAAGTTTTCATATCAAACG
GAAGGGTAGCTGATGCAGTGATCGTGGCAGCTGTCACTGGTGACATTGGA
AGTAGAGGGTCGGATACTCTTTCACTATTCTTGGTGGATGCA
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