mRNA_M-pyrifera_M_contig95538.22023.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95538.22023.1
Unique NamemRNA_M-pyrifera_M_contig95538.22023.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: A0A059BTJ8_EUCGR (DNA helicase n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BTJ8_EUCGR)

HSP 1 Score: 242 bits (618), Expect = 1.710e-70
Identity = 126/247 (51.01%), Postives = 162/247 (65.59%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWK------SFSSGTLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVR--KGMGSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFASP 717
            SP+ S+A EL L FPV+LENPHV+    +    +AAGP     NSSY  R S  YK ELG+ +  L R VP G+LVFFPSY  L + + CWK      S  S T+W+ I ++K P+ EPR     P+ +E + S +      G++  AVCRGK SEG+DF D+  RAVVVTGLPF    DP+VR+KR++LDE AR +++   R  LTG+EWY QQASRAVNQA+GR IRHR D+G I++ DERFA P
Sbjct:  435 SPMDSFAQELNLDFPVRLENPHVISSDQIWAGVVAAGPSGCLFNSSYRNRDSLEYKQELGNAIVNLARIVPDGLLVFFPSYYILDQCIQCWKNMAHPNSVDSNTIWERICKHKQPVVEPRQSSLFPLAIEDYMSKLNDTSNSGALFFAVCRGKVSEGLDFADSAGRAVVVTGLPFATRTDPKVRLKREYLDELARLQKE---RRILTGDEWYNQQASRAVNQAVGRVIRHRDDYGAIIMLDERFAHP 678
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BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: A0A6H5KW94_9PHAE (HELICc2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW94_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 3.850e-70
Identity = 120/237 (50.63%), Postives = 161/237 (67.93%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSFSSGTLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVRKGMGSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFA 711
            SPLSS+ +EL LPF VQ+ENPHV+      + T+  GP +V LNSSYA R +++YK ELG+ +A LCR VPGG+LVFF +Y T+ + V  WK FS+G  W  I  +K P+ EPR+  ++   +E + + +    G+V LAVCRGK SEG+DF D   R VVVTG+P+ P MDP+V +K+ ++ E             +TG+EWY+QQASRAVNQAIGR IRHR D+GC++L D RFA
Sbjct:   20 SPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVHRWKHFSNGKAWARIMAHKEPMIEPRTAADLKAVMEEYDAKIENTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDPKVVLKKKYMSESLLPPGV----ARVTGDEWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDSRFA 252
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BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: A0A484ML81_9ASTE (DNA helicase n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484ML81_9ASTE)

HSP 1 Score: 239 bits (610), Expect = 5.900e-70
Identity = 121/247 (48.99%), Postives = 161/247 (65.18%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSFSSG------TLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVR--KGMGSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFASP 717
            SPL S+A EL L FP++LENPHV+    V    +  GP    LNSSY +R S  YK++LG+ +    R VP G+LVFFPSY  L + V CWKS  +G      T+W+ I ++K+P+ EPR     P  +E + S ++     G+V  AVCRGK SEG+DF D   RAVV+TG+PF    +P+VR+KR+++D++A++ Q   T   LTGEEWY QQASRAVNQA+GR IRHR D+G I+  DERF  P
Sbjct:  327 SPLDSFADELKLEFPIRLENPHVISEDQVWAGVVPVGPSGYPLNSSYRSRDSLQYKLDLGNAIVNFARIVPDGLLVFFPSYYLLEQCVGCWKSMDNGNQTNSSTIWERICKHKLPVVEPRQSSLFPSAIEDYMSKLKDKSASGAVFFAVCRGKVSEGLDFADHAGRAVVITGIPFATTSNPKVRLKREYMDQQAQS-QLPSTAKGLTGEEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFTHP 572
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BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: F6HYG0_VITVI (Helicase ATP-binding domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=F6HYG0_VITVI)

HSP 1 Score: 233 bits (594), Expect = 5.510e-69
Identity = 125/247 (50.61%), Postives = 159/247 (64.37%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWK------SFSSGTLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVRKGM--GSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFASP 717
            SPL S+A EL L FPV+LENPHV+  + +    + AGP     NSSY TR S  YK ELG+ +    R VP G+LVFFPSY  L + V CWK      S +S T+W+ I ++K P+ EPR     P  +E + + ++     G+V  AVCRGK SEG+DF D   RAVV+TG+PF    DP+VR+KR+FLD+R  + QK   +  LTGEEWY QQASRAVNQA+GR IRH  D+G I+  DERFA P
Sbjct:  380 SPLESFAQELKLEFPVRLENPHVISSNQIWAGVVPAGPSGCSFNSSYRTRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYILEQCVGCWKNKSHANSTNSSTIWERICKHKQPVIEPRQSSLFPSSIEDYMNKLKDSSMSGAVFFAVCRGKVSEGLDFADHAGRAVVITGIPFAMRTDPKVRLKREFLDQRGLS-QKEGCKV-LTGEEWYTQQASRAVNQAVGRVIRHCHDFGAIIFCDERFAHP 624
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BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: UPI001C260E38 (regulator of telomere elongation helicase 1 homolog isoform X2 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C260E38)

HSP 1 Score: 235 bits (600), Expect = 6.120e-69
Identity = 116/244 (47.54%), Postives = 160/244 (65.57%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSF------SSGTLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVRK-GMGSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFA 711
            SP+ S+A EL L FPV+LENPHV+  + +       GP     NSSY  RGS  YK ELG+ +    R VP G+LVFFPSY  L + ++CWK+       +S T+W+ I ++K+P+ EPR     P+ ++ + + +++  +G+V  AVCRGK SEG+DF D   RAVV+TGLPF  L DP+VR+KR++LD+   + +  +    LTGEEWY QQ  RA+NQAIGR IRHR D+G I+L DERF+
Sbjct:  454 SPMDSFAEELKLEFPVRLENPHVISGNQIWAGVAPVGPSGYSFNSSYRNRGSIEYKSELGNAIVNFARIVPDGLLVFFPSYYLLEQCISCWKTMGQQNLSNSTTIWERICKHKLPVVEPRQSSLFPLAIDDYMTKLKEVNIGAVFFAVCRGKVSEGLDFADHAGRAVVITGLPFATLTDPKVRLKREYLDQHVHSRKSINKGQGLTGEEWYSQQTLRAINQAIGRVIRHRHDYGAIILCDERFS 697
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BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: UPI00125E6287 (regulator of telomere elongation helicase 1 homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E6287)

HSP 1 Score: 236 bits (603), Expect = 2.080e-68
Identity = 119/247 (48.18%), Postives = 161/247 (65.18%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSFSSG------TLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAV--RKGMGSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFASP 717
            SP+ S+A EL L FP++LENPHV+  + V    + AGP     NSSY +R S  YK++LG+ +  L R VP G+LVFFPSY  L + + CWKS  +G      T+W+ I ++K+P+ EPR     P  +E + S +  R   G+   AVCRGK SEG+DF D   RAVV+TG+PF    DP+VR+KR++LD++ + +Q       LTGEEWY QQASRAVNQA+GR IRH+ D+G I+  DERF +P
Sbjct:  454 SPMDSFAEELKLEFPIRLENPHVISENQVWAGVVPAGPSGYPFNSSYRSRDSLQYKLDLGNAIVNLARIVPDGLLVFFPSYYFLDQCIGCWKSTGNGNQTNSSTIWERICKHKLPVVEPRQSSLFPSAIEDYMSKLKDRSASGAAFFAVCRGKVSEGLDFADHAGRAVVITGIPFATRNDPKVRLKREYLDQQTQLQQS--ISKGLTGEEWYSQQASRAVNQAVGRVIRHKHDYGAIIFCDERFTNP 698
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BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: A0A8K0MLN6_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MLN6_9ROSA)

HSP 1 Score: 236 bits (603), Expect = 2.130e-68
Identity = 121/242 (50.00%), Postives = 160/242 (66.12%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSFS---SGTLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVR--KGMGSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFA 711
            SP+ S+A EL L FPVQLENPHV+  + +    + AGP     NSSY +R S  YK ELG+ +    R VP G+LVFFPSY  L + + CWK+ S   S T+W+ I ++K P+ EPR     P+ +E +   ++     G+V  AVCRGK SEG+DF D   RAVVVTG+PF  + DP+VR+KR+FLD++A + ++      LTGE+WY QQASRAVNQA+GR IRHR D+G I+  DERFA
Sbjct:  445 SPMDSFAQELKLEFPVQLENPHVITANQIWAGVVPAGPSGCSFNSSYRSRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYLLDQCIECWKNMSHANSTTIWERICKHKKPVVEPRQSALFPLSIEDYMKKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVVTGMPFATITDPKVRLKREFLDQQANSLRELCKSEVLTGEDWYSQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA 686
[Close]
BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: A0A2K3L1N8_TRIPR (Regulator of telomere elongation helicase 1-like protein (Fragment) n=5 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3L1N8_TRIPR)

HSP 1 Score: 220 bits (561), Expect = 2.370e-68
Identity = 116/239 (48.54%), Postives = 154/239 (64.44%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSFS---SGTLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVRKGM--GSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADE 702
            SPL S+A EL L FP++LENPHV+  + +    +  GP     NSSY  R +  YK ELG+ +  L R VP G+LVFFPSY  L +S+ACWKS S   S ++W+ I  +K P+ EPR        ++ + + +      G+V  AVCRGK SEG+DF D   RAVVVTGLPF    DP+VR+KR++LD+++ A+ +      LTG+EWY QQASRAVNQA+GR IRHR D+G I+  DE
Sbjct:   37 SPLDSFAEELKLDFPIRLENPHVIGPNQIWAGVVPVGPSGRTFNSSYRNRDTMEYKQELGNAIVNLARIVPDGLLVFFPSYYLLEQSIACWKSLSNESSASIWERICNHKKPVIEPRESSLFASSIKDYLTKLNDTTISGAVFFAVCRGKVSEGLDFADHSGRAVVVTGLPFATSTDPKVRLKREYLDQQSGAQGESFK--VLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 273
[Close]
BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: A0A067EJ33_CITSI (Uncharacterized protein n=2 Tax=Citrus TaxID=2706 RepID=A0A067EJ33_CITSI)

HSP 1 Score: 233 bits (593), Expect = 3.100e-68
Identity = 116/247 (46.96%), Postives = 163/247 (65.99%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSFSSG---TLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVR--KGMGSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLT---GEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFASP 717
            SP+ S+A EL L FP+++ENPHV+    +    +  GP    LNSSY  R S  YK ELG+ +  + R VP G+L+FFPSY  + + +ACWK+ S G   T+W+ I ++K P+ EPR     P+ +E + + ++     G+V  AVCRGK SEG+DF D   RAVV+TG+PF  + DP+VR+KR++LD +A+++   +  T L+   GE+WY QQASRAVNQA+GR IRHR D+G I+  DERFA P
Sbjct:  446 SPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHP 692
[Close]
BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Match: M5XHT6_PRUPE (Uncharacterized protein n=1 Tax=Prunus persica TaxID=3760 RepID=M5XHT6_PRUPE)

HSP 1 Score: 233 bits (593), Expect = 3.100e-68
Identity = 119/244 (48.77%), Postives = 160/244 (65.57%), Query Frame = 1 
Query:    1 SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATRGSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSFS---SGTLWDAIQRNKIPIEEPRSRDEVPIRVEAFRSAVR--KGMGSVLLAVCRGKFSEGVDFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTGEEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFASP 717
            SPL S+A EL L FPV+LENPHV+  + +    + AGP     NSSY  R S  YK +LG+ +    R VP G+LVFFPSY  L + +ACWK+ S   S T+W+ I ++K P+ EPR      + +E + + ++     G+V  AVCRGK SEG+DF D   RAVV+TGLPF    DP+VR+KR++LD++A ++++      LTGE+WY QQA RAVNQA+GR IRHR D+G I+  DERFA P
Sbjct:  447 SPLDSFAQELKLEFPVRLENPHVITPNQIWAGVVPAGPSGFSFNSSYRNRDSLEYKRDLGNAIVNFARIVPDGLLVFFPSYYILDQCIACWKNTSHANSTTIWERISKHKKPVVEPRQSSLFLLSIEDYMAKLKDTSASGAVFFAVCRGKVSEGLDFADHAGRAVVITGLPFATRNDPKVRLKREYLDQQAYSQRQVCKLEVLTGEDWYNQQALRAVNQAVGRVIRHRHDYGAIIFCDERFAQP 690
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95538.22023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059BTJ8_EUCGR1.710e-7051.01DNA helicase n=4 Tax=Myrtoideae TaxID=1699513 RepI... [more]
A0A6H5KW94_9PHAE3.850e-7050.63HELICc2 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A484ML81_9ASTE5.900e-7048.99DNA helicase n=3 Tax=Cuscuta sect. Cleistogrammica... [more]
F6HYG0_VITVI5.510e-6950.61Helicase ATP-binding domain-containing protein n=1... [more]
UPI001C260E386.120e-6947.54regulator of telomere elongation helicase 1 homolo... [more]
UPI00125E62872.080e-6848.18regulator of telomere elongation helicase 1 homolo... [more]
A0A8K0MLN6_9ROSA2.130e-6850.00Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A2K3L1N8_TRIPR2.370e-6848.54Regulator of telomere elongation helicase 1-like p... [more]
A0A067EJ33_CITSI3.100e-6846.96Uncharacterized protein n=2 Tax=Citrus TaxID=2706 ... [more]
M5XHT6_PRUPE3.100e-6848.77Uncharacterized protein n=1 Tax=Prunus persica Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95538contigM-pyrifera_M_contig95538:1..717 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score244.2
Seed ortholog evalue6.2e-62
Seed eggNOG ortholog71139.XP_010062453.1
Preferred nameRTEL1
KEGG koko:K11136
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000723,GO:0000725,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006282,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009555,GO:0009892,GO:0009987,GO:0010569,GO:0010605,GO:0016043,GO:0019219,GO:0019222,GO:0022622,GO:0031323,GO:0031324,GO:0032200,GO:0032501,GO:0032502,GO:0033554,GO:0034641,GO:0034645,GO:0036297,GO:0042592,GO:0043007,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043570,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045005,GO:0045910,GO:0045934,GO:0046483,GO:0048229,GO:0048364,GO:0048519,GO:0048523,GO:0048583,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0070716,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0099402,GO:1901360,GO:1901576,GO:2000779,GO:2001020
EggNOG free text desc.Regulator of telomere elongation helicase
EggNOG OGs37HFH@33090,3GEVA@35493,COG1199@1,KOG1132@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032
Exons1
Model size717
Cds size717
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816869.1310694-CDS-M-pyrifera_M_contig95538:0..7171622816869.1310694-CDS-M-pyrifera_M_contig95538:0..717Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95538 1..717 +
1692278226.1417465-CDS-M-pyrifera_M_contig95538:0..7171692278226.1417465-CDS-M-pyrifera_M_contig95538:0..717Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95538 1..717 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95538.22023.1prot_M-pyrifera_M_contig95538.22023.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95538 1..717 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95538.22023.1

>prot_M-pyrifera_M_contig95538.22023.1 ID=prot_M-pyrifera_M_contig95538.22023.1|Name=mRNA_M-pyrifera_M_contig95538.22023.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=239bp
SPLSSYASELVLPFPVQLENPHVVPRSHVLVSTIAAGPRNVRLNSSYATR
GSEAYKVELGSLVAALCRTVPGGILVFFPSYGTLAESVACWKSFSSGTLW
DAIQRNKIPIEEPRSRDEVPIRVEAFRSAVRKGMGSVLLAVCRGKFSEGV
DFRDAECRAVVVTGLPFPPLMDPQVRVKRDFLDERARAEQKHHTRTSLTG
EEWYRQQASRAVNQAIGRAIRHRTDWGCILLADERFASP
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mRNA from alignment at M-pyrifera_M_contig95538:1..717+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95538.22023.1 ID=mRNA_M-pyrifera_M_contig95538.22023.1|Name=mRNA_M-pyrifera_M_contig95538.22023.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=717bp|location=Sequence derived from alignment at M-pyrifera_M_contig95538:1..717+ (Macrocystis pyrifera P11B4 male)
TCCCCACTCTCCAGTTATGCATCTGAATTGGTTCTACCATTTCCAGTGCA
ACTTGAAAATCCTCATGTTGTACCCCGCTCTCATGTCTTGGTGTCCACAA
TTGCTGCAGGACCTCGCAATGTACGATTGAATTCATCCTATGCCACCCGT
GGCTCTGAAGCATACAAGGTAGAATTAGGCTCTTTGGTTGCTGCATTGTG
TCGCACAGTTCCAGGTGGAATTTTGGTATTCTTTCCAAGTTATGGCACCT
TGGCAGAAAGTGTTGCGTGCTGGAAGTCATTTTCCTCTGGAACACTGTGG
GATGCAATTCAACGAAACAAAATCCCAATTGAAGAACCCCGGAGTCGTGA
TGAAGTACCTATTCGTGTGGAAGCTTTTCGTTCTGCGGTACGAAAAGGAA
TGGGTAGTGTGTTGTTGGCTGTTTGCCGTGGCAAATTTTCTGAAGGTGTG
GATTTTCGTGATGCAGAGTGTCGTGCTGTTGTTGTCACGGGGCTTCCATT
CCCACCATTGATGGATCCACAAGTTCGTGTAAAGCGTGATTTTCTTGATG
AACGTGCACGTGCAGAACAAAAGCATCATACTCGCACTTCACTAACGGGT
GAAGAATGGTATCGTCAGCAAGCATCACGTGCAGTCAATCAAGCGATTGG
ACGAGCAATTCGTCATAGAACAGATTGGGGGTGTATCCTTCTTGCAGATG
AGCGCTTTGCATCCCCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95538:1..717+

>mRNA_M-pyrifera_M_contig95538.22023.1 ID=mRNA_M-pyrifera_M_contig95538.22023.1|Name=mRNA_M-pyrifera_M_contig95538.22023.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1434bp|location=Sequence derived from alignment at M-pyrifera_M_contig95538:1..717+ (Macrocystis pyrifera P11B4 male)
TCCCCACTCTCCAGTTATGCATCTGAATTGGTTCTACCATTTCCAGTGCA
ACTTGAAAATCCTCATGTTGTACCCCGCTCTCATGTCTTGGTGTCCACAA
TTGCTGCAGGACCTCGCAATGTACGATTGAATTCATCCTATGCCACCCGT
GGCTCTGAAGCATACAAGGTAGAATTAGGCTCTTTGGTTGCTGCATTGTG
TCGCACAGTTCCAGGTGGAATTTTGGTATTCTTTCCAAGTTATGGCACCT
TGGCAGAAAGTGTTGCGTGCTGGAAGTCATTTTCCTCTGGAACACTGTGG
GATGCAATTCAACGAAACAAAATCCCAATTGAAGAACCCCGGAGTCGTGA
TGAAGTACCTATTCGTGTGGAAGCTTTTCGTTCTGCGGTACGAAAAGGAA
TGGGTAGTGTGTTGTTGGCTGTTTGCCGTGGCAAATTTTCTGAAGGTGTG
GATTTTCGTGATGCAGAGTGTCGTGCTGTTGTTGTCACGGGGCTTCCATT
CCCACCATTGATGGATCCACAAGTTCGTGTAAAGCGTGATTTTCTTGATG
AACGTGCACGTGCAGAACAAAAGCATCATACTCGCACTTCACTAACGGGT
GAAGAATGGTATCGTCAGCAAGCATCACGTGCAGTCAATCAAGCGATTGG
ACGAGCAATTCGTCATAGAACAGATTGGGGGTGTATCCTTCTTGCAGATG
AGCGCTTTGCATCCCCGTCCCCACTCTCCAGTTATGCATCTGAATTGGTT
CTACCATTTCCAGTGCAACTTGAAAATCCTCATGTTGTACCCCGCTCTCA
TGTCTTGGTGTCCACAATTGCTGCAGGACCTCGCAATGTACGATTGAATT
CATCCTATGCCACCCGTGGCTCTGAAGCATACAAGGTAGAATTAGGCTCT
TTGGTTGCTGCATTGTGTCGCACAGTTCCAGGTGGAATTTTGGTATTCTT
TCCAAGTTATGGCACCTTGGCAGAAAGTGTTGCGTGCTGGAAGTCATTTT
CCTCTGGAACACTGTGGGATGCAATTCAACGAAACAAAATCCCAATTGAA
GAACCCCGGAGTCGTGATGAAGTACCTATTCGTGTGGAAGCTTTTCGTTC
TGCGGTACGAAAAGGAATGGGTAGTGTGTTGTTGGCTGTTTGCCGTGGCA
AATTTTCTGAAGGTGTGGATTTTCGTGATGCAGAGTGTCGTGCTGTTGTT
GTCACGGGGCTTCCATTCCCACCATTGATGGATCCACAAGTTCGTGTAAA
GCGTGATTTTCTTGATGAACGTGCACGTGCAGAACAAAAGCATCATACTC
GCACTTCACTAACGGGTGAAGAATGGTATCGTCAGCAAGCATCACGTGCA
GTCAATCAAGCGATTGGACGAGCAATTCGTCATAGAACAGATTGGGGGTG
TATCCTTCTTGCAGATGAGCGCTTTGCATCCCCG
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