mRNA_M-pyrifera_M_contig95467.22011.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95467.22011.1
Unique NamemRNA_M-pyrifera_M_contig95467.22011.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: A0A517WF61_9PLAN (Inner membrane transport protein YbaT n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517WF61_9PLAN)

HSP 1 Score: 457 bits (1177), Expect = 3.480e-159
Identity = 236/243 (97.12%), Postives = 241/243 (99.18%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            IEITRGAAPVAFLISGIVALLTSYSYLKLTL+FPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNI+STELVIRSENFFNGVKMVLLA+F+VAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANP+KTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVG  SDRALSVAATRIAGTPGFIAI
Sbjct:   35 IEITRGAAPVAFLISGIVALLTSYSYLKLTLQFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIISTELVIRSENFFNGVKMVLLALFIVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPQKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGNASDRALSVAATRIAGTPGFIAI 277          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: A0A5C6EA45_9BACT (Inner membrane transport protein YbaT n=1 Tax=Novipirellula aureliae TaxID=2527966 RepID=A0A5C6EA45_9BACT)

HSP 1 Score: 357 bits (916), Expect = 1.150e-119
Identity = 178/243 (73.25%), Postives = 209/243 (86.01%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            I++TRG AP+AFLI+GIVALLTSYSYLKLTLRFPGEGGTV++LNR FGSGI+TG+ANILL+M Y+VLVA+YAYAFGSYGAS FP     FW H L SGVI+GL +LNI+++ LVIRSEN FN +KM+LL +F+VAGLLTPMDWTRL P+N+V+   LIAGAMLIFLNYEGFELIANAS DVANPK+TLP+AY+GG+ VV+ IY+LIV VVVGH+SF EV K SD ALSVAA  + G  GFIAI
Sbjct:   41 IQVTRGGAPIAFLIAGIVALLTSYSYLKLTLRFPGEGGTVDFLNRGFGSGIVTGSANILLVMSYVVLVAVYAYAFGSYGASFFPEADRPFWSHVLTSGVIVGLVILNILASNLVIRSENAFNAIKMLLLTVFIVAGLLTPMDWTRLSPDNFVAAPSLIAGAMLIFLNYEGFELIANASKDVANPKRTLPIAYIGGVLVVIAIYMLIVIVVVGHLSFGEVAKDSDTALSVAAEDVMGRTGFIAI 283          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: A0A7D5RZK2_9PROT (Amino acid permease n=1 Tax=Defluviicoccus sp. TaxID=2682137 RepID=A0A7D5RZK2_9PROT)

HSP 1 Score: 343 bits (881), Expect = 2.080e-114
Identity = 171/243 (70.37%), Postives = 207/243 (85.19%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            +E+TRG A VAFLI+GIVALLTSYSYLKLTLR+PGEGGTV +LN+AFG GI+TGAANILLL+ Y+VLVAIYAYAFGSYGA+ FP +   FW H L++ V++GL ++N++  ELV+RSEN FN +KMVLLA FVVAGLLTPM+W+RLGPE +V+P+GL+AGAMLIFLNY GFELIANAS+DVA+PK+TLP+AYLGG+ +V+  YVLIV VVVGH+SFAEV    D ALSVAA  + G  G IAI
Sbjct:   35 VEVTRGGAAVAFLIAGIVALLTSYSYLKLTLRYPGEGGTVAFLNQAFGGGIVTGAANILLLLSYVVLVAIYAYAFGSYGATFFPVEDRGFWLHLLINVVVVGLVVVNVLGNELVVRSENVFNLLKMVLLAAFVVAGLLTPMEWSRLGPETFVTPLGLVAGAMLIFLNYXGFELIANASSDVADPKRTLPIAYLGGVLIVIAFYVLIVAVVVGHLSFAEVAASXDFALSVAARELLGRRGAIAI 277          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: A0A517M9J3_9BACT (Inner membrane transport protein YbaT n=5 Tax=Pirellulaceae TaxID=2691357 RepID=A0A517M9J3_9BACT)

HSP 1 Score: 340 bits (871), Expect = 7.470e-113
Identity = 170/243 (69.96%), Postives = 207/243 (85.19%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            I +T+G AP+AFLI+GIVALLTSYSYLKLTLR+PG GGTV++LNRAFG+GI TGAANILLL+ Y+VLVA+YAYAFGSYGA  FP     FW HTL+SGVI+GL  +N +   LV+R+EN FN VK++LLA F+VAGL TPM+W+RLG E+YVSP+GL+AGAMLIFLNYEGFELIANAS DVANPK++LP+AYLGG+ +V+ IY+LIV VVVGH+SFA+V + SD ALSVAA  + G  G+IAI
Sbjct:   35 ITVTKGGAPIAFLIAGIVALLTSYSYLKLTLRYPGVGGTVDFLNRAFGNGIFTGAANILLLLSYVVLVAVYAYAFGSYGACFFPEADRPFWTHTLISGVIVGLVGVNALGGSLVVRAENVFNIVKILLLAGFIVAGLATPMEWSRLGTEHYVSPMGLVAGAMLIFLNYEGFELIANASKDVANPKRSLPIAYLGGVLIVIAIYMLIVIVVVGHLSFADVAQDSDTALSVAAQDVLGRTGYIAI 277          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: A0A518CFD4_9BACT (Inner membrane transport protein YbaT n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A518CFD4_9BACT)

HSP 1 Score: 335 bits (858), Expect = 6.110e-111
Identity = 168/243 (69.14%), Postives = 200/243 (82.30%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            +E+T+G AP AFLISGIVALLTSYSYLKLTLR+PGEGGTVE+LNRAFG GILTGAANILLL+ Y+VL+AIYAYAFGSY AS FP +   FW H  +  VI+GL LLN+ +++LV+RSENFFN  KM+LL  F++ GL TP++W+RL  E+YVS  GLIAGAMLIFLNYEGFELIANASNDVANPK+TLP+AYLGG+ +VMV+Y LI  VVVGH+ F EV + S   LSVAA  + G  G+IAI
Sbjct:   35 VEVTKGGAPAAFLISGIVALLTSYSYLKLTLRYPGEGGTVEFLNRAFGGGILTGAANILLLLSYVVLLAIYAYAFGSYAASFFPKEDQAFWLHKFICAVIVGLFLLNLFASKLVVRSENFFNAAKMILLLAFILFGLATPIEWSRLDYEHYVSAPGLIAGAMLIFLNYEGFELIANASNDVANPKRTLPIAYLGGVAIVMVLYFLIALVVVGHLGFEEVSQSSAHVLSVAADDVMGRTGYIAI 277          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: A0A369XTY2_9PROT (Amino acid permease n=1 Tax=Candidatus Accumulibacter phosphatis TaxID=327160 RepID=A0A369XTY2_9PROT)

HSP 1 Score: 330 bits (847), Expect = 3.610e-109
Identity = 159/243 (65.43%), Postives = 200/243 (82.30%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            +++T+G AP+AFLI+GIVALLTSYSYLKLTL FPGEGGTV++LNRAFG+GI+TGAANI+LL+ Y+VLV++YA+AFGSYG+  F      FW H L SG+I+ L L+N      V+R+EN FN +K++LLA F++ GL TPMDW RL PE YV+P+GLIAGAMLIFLNYEGFELIANAS DVA P+++LP+AY+GG+ +V+VIY+L+ GVVVGH+SFAEV   SD ALSVAA +  G  GFIAI
Sbjct:   37 VQVTKGGAPIAFLIAGIVALLTSYSYLKLTLSFPGEGGTVDFLNRAFGTGIITGAANIMLLLSYVVLVSVYAFAFGSYGSGFFAVADQGFWTHVLASGIILVLVLVNAFGGSFVVRAENLFNALKLILLAGFIIVGLATPMDWQRLAPETYVTPMGLIAGAMLIFLNYEGFELIANASKDVARPERSLPIAYIGGVLMVIVIYMLVAGVVVGHLSFAEVAANSDNALSVAAQQFMGRTGFIAI 279          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: UPI000E2767BC (APC family permease n=1 Tax=Tropicimonas sp. IMCC34043 TaxID=2248760 RepID=UPI000E2767BC)

HSP 1 Score: 323 bits (828), Expect = 1.980e-106
Identity = 159/243 (65.43%), Postives = 200/243 (82.30%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            IE+T+GAAP+AFL++GIVALLTSYSYLKLTL FPGEGGTV++LNRAFG GILTGAANILLL+ Y+VL+AIYAYAFGSYGA +FP      W H L SGVI+GL  LN+++   VIRSEN FN +KM+LL  F+VAGL+ P DW+RLGP + VSPV LI+GAMLIFLNYEGFELIAN++ +V NP+++LP+AY+GG+ +V+V+Y+LI  VV+GHM+  +VG+ SD  LS A   I G PG++AI
Sbjct:   34 IEMTKGAAPLAFLVAGIVALLTSYSYLKLTLAFPGEGGTVDFLNRAFGGGILTGAANILLLLSYVVLLAIYAYAFGSYGADLFPEAHQGVWLHGLTSGVILGLLALNVLAARAVIRSENAFNAIKMLLLGGFIVAGLVMPGDWSRLGPVDAVSPVALISGAMLIFLNYEGFELIANSAAEVKNPRRSLPIAYIGGVLIVIVLYMLITAVVLGHMTLEQVGQNSDTTLSAAGRAILGPPGYLAI 276          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: A0A126UY66_9RHOB (Uncharacterized protein n=1 Tax=Falsihalocynthiibacter arcticus TaxID=1579316 RepID=A0A126UY66_9RHOB)

HSP 1 Score: 319 bits (818), Expect = 7.730e-105
Identity = 160/243 (65.84%), Postives = 201/243 (82.72%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            IE+T+ AAP+AF+I+GIVALLTSYSYLKLTL +PGEGGTV++L R FG+G+ TGAANILLL+ Y+VL+AIYAYAFGSYGA +FP +  NF  H L SGVIIGL  LN+++++LVI+SEN FN +KMVLL  F++AG LTPMDWTRL P   V+PV LIAG+MLIFLN+EGFELIANAS DVA+P+++LP+AY+GG+ +V+V+YVLIV VV+GHMS  +VG   D ALS A   + G  G+IAI
Sbjct:   42 IELTKQAAPLAFVIAGIVALLTSYSYLKLTLAYPGEGGTVDFLCRGFGTGLFTGAANILLLLSYVVLLAIYAYAFGSYGADLFPHESQNFLIHLLTSGVIIGLVGLNVLASKLVIKSENVFNIIKMVLLVGFIIAGFLTPMDWTRLDPVGAVTPVALIAGSMLIFLNFEGFELIANASKDVADPRRSLPIAYIGGVLIVIVLYVLIVSVVLGHMSLEQVGANRDTALSAAGREVLGKTGYIAI 284          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: UPI001CBD9992 (APC family permease n=1 Tax=Tateyamaria pelophila TaxID=328415 RepID=UPI001CBD9992)

HSP 1 Score: 310 bits (795), Expect = 2.170e-101
Identity = 151/243 (62.14%), Postives = 200/243 (82.30%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            IE+TR AAP+AF+I+GIVALLTSYSYLKLTL +PGEGGTV++L+RAFG+G+ TG+ NILLL+ Y+VL+A+YA+AFGSYGA +FP    +  +H L+SGVIIGL  LN+++ +LVI+SEN FN +K++LL  F++AGL+TPMDW+RL P   V+PV LIAG+MLIFLNYEGFELIANAS DVANP+++LP+AY+GG+ +V+V+YVLI  VV+GHM+ A++      ALS A   I G  G++AI
Sbjct:   40 IELTRQAAPLAFVIAGIVALLTSYSYLKLTLTYPGEGGTVDFLSRAFGTGVFTGSVNILLLLSYVVLLAVYAFAFGSYGADLFPDVPQDILRHALISGVIIGLVALNVLAAKLVIKSENIFNIIKLLLLVGFIIAGLMTPMDWSRLDPVGSVTPVALIAGSMLIFLNYEGFELIANASKDVANPRRSLPIAYIGGVLIVIVLYVLITAVVLGHMTLAQIDAHKATALSAAGREILGITGYLAI 282          
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Match: UPI0016646408 (APC family permease n=1 Tax=Bizionia arctica TaxID=1495645 RepID=UPI0016646408)

HSP 1 Score: 307 bits (787), Expect = 2.670e-100
Identity = 150/243 (61.73%), Postives = 191/243 (78.60%), Query Frame = 1
Query:    1 IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSGILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVIIGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPENYVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVMVIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI 729
            IEI RG+AP+AF I+GIVALLT YSYLKLTL++PGEGGTV +LN+ FG+G  TG  NILLL  Y+VLV++YAYAFG YG+S FP     FW++TL +G+I+ L  +N    +LVIRSEN FN +KM++L  F++ GL    DWTR+ PENYVSP+G+I+GAMLIFLNYEGFELIANAS +VAN KKTLP+AY+GGI + M+ Y+LIV VV+GH++F E+   S  +LSVAA ++ G  GFIAI
Sbjct:   37 IEIARGSAPIAFGIAGIVALLTGYSYLKLTLKYPGEGGTVSFLNKGFGTGTFTGGLNILLLFSYVVLVSVYAYAFGGYGSSFFPEADQEFWRYTLTTGIIVLLLFVNAFGGKLVIRSENLFNALKMIILLGFIIFGLTMDADWTRIEPENYVSPLGMISGAMLIFLNYEGFELIANASGEVANRKKTLPIAYIGGILIAMIFYLLIVSVVIGHLNFNEIALNSVNSLSVAAEKMLGKKGFIAI 279          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95467.22011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WF61_9PLAN3.480e-15997.12Inner membrane transport protein YbaT n=3 Tax=Gime... [more]
A0A5C6EA45_9BACT1.150e-11973.25Inner membrane transport protein YbaT n=1 Tax=Novi... [more]
A0A7D5RZK2_9PROT2.080e-11470.37Amino acid permease n=1 Tax=Defluviicoccus sp. Tax... [more]
A0A517M9J3_9BACT7.470e-11369.96Inner membrane transport protein YbaT n=5 Tax=Pire... [more]
A0A518CFD4_9BACT6.110e-11169.14Inner membrane transport protein YbaT n=2 Tax=Pire... [more]
A0A369XTY2_9PROT3.610e-10965.43Amino acid permease n=1 Tax=Candidatus Accumulibac... [more]
UPI000E2767BC1.980e-10665.43APC family permease n=1 Tax=Tropicimonas sp. IMCC3... [more]
A0A126UY66_9RHOB7.730e-10565.84Uncharacterized protein n=1 Tax=Falsihalocynthiiba... [more]
UPI001CBD99922.170e-10162.14APC family permease n=1 Tax=Tateyamaria pelophila ... [more]
UPI00166464082.670e-10061.73APC family permease n=1 Tax=Bizionia arctica TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95467contigM-pyrifera_M_contig95467:2..730 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score239.2
Seed ortholog evalue2e-60
Seed eggNOG ortholog1121447.JONL01000004_gene2751
Preferred namepotE
KEGG koko:K16263
KEGG TC2.A.3.13
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Amino acid permease
EggNOG OGs1QXK2@1224,2M9EC@213115,2WRDK@28221,42MZD@68525,COG0531@1,COG0531@2
COG Functional cat.E
Best tax levelDesulfovibrionales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size729
Cds size729
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816868.6058166-CDS-M-pyrifera_M_contig95467:1..7301622816868.6058166-CDS-M-pyrifera_M_contig95467:1..730Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95467 2..730 +
1692278225.8423467-CDS-M-pyrifera_M_contig95467:1..7301692278225.8423467-CDS-M-pyrifera_M_contig95467:1..730Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95467 2..730 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95467.22011.1prot_M-pyrifera_M_contig95467.22011.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95467 2..730 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95467.22011.1

>prot_M-pyrifera_M_contig95467.22011.1 ID=prot_M-pyrifera_M_contig95467.22011.1|Name=mRNA_M-pyrifera_M_contig95467.22011.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=243bp
IEITRGAAPVAFLISGIVALLTSYSYLKLTLRFPGEGGTVEYLNRAFGSG
ILTGAANILLLMCYIVLVAIYAYAFGSYGASVFPADQNNFWQHTLVSGVI
IGLCLLNIVSTELVIRSENFFNGVKMVLLAIFVVAGLLTPMDWTRLGPEN
YVSPVGLIAGAMLIFLNYEGFELIANASNDVANPKKTLPVAYLGGIFVVM
VIYVLIVGVVVGHMSFAEVGKVSDRALSVAATRIAGTPGFIAI
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mRNA from alignment at M-pyrifera_M_contig95467:2..730+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95467.22011.1 ID=mRNA_M-pyrifera_M_contig95467.22011.1|Name=mRNA_M-pyrifera_M_contig95467.22011.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=729bp|location=Sequence derived from alignment at M-pyrifera_M_contig95467:2..730+ (Macrocystis pyrifera P11B4 male)
ATCGAGATCACACGGGGTGCCGCTCCCGTCGCCTTCCTGATCTCGGGCAT CGTCGCCCTGCTCACCAGCTATTCGTATCTCAAATTAACATTGCGGTTTC CCGGCGAGGGCGGAACCGTTGAGTATCTCAACCGCGCCTTCGGCAGTGGT ATCCTGACCGGTGCCGCCAACATACTGCTGTTGATGTGTTACATCGTGCT GGTTGCTATCTACGCCTATGCCTTTGGCAGCTATGGTGCCAGCGTGTTCC CCGCCGATCAGAATAACTTCTGGCAACATACACTGGTCAGTGGTGTCATC ATCGGCTTATGCCTTCTCAATATCGTCAGCACCGAACTGGTGATCCGTTC GGAGAACTTCTTTAACGGCGTCAAAATGGTCCTGCTGGCGATATTCGTCG TGGCCGGTCTGCTGACACCCATGGACTGGACGCGGCTCGGTCCGGAAAAC TATGTCTCCCCCGTCGGCCTCATTGCCGGAGCCATGCTCATTTTCCTGAA CTATGAAGGCTTCGAATTAATCGCCAATGCTTCCAATGACGTGGCCAACC CGAAGAAAACCCTACCTGTAGCCTACCTCGGTGGAATCTTTGTGGTGATG GTGATCTATGTATTGATCGTGGGAGTCGTGGTTGGACACATGAGTTTCGC CGAAGTCGGAAAAGTGAGCGATCGCGCGCTATCGGTGGCGGCAACCCGCA TTGCAGGCACCCCCGGCTTCATCGCAATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95467:2..730+

>mRNA_M-pyrifera_M_contig95467.22011.1 ID=mRNA_M-pyrifera_M_contig95467.22011.1|Name=mRNA_M-pyrifera_M_contig95467.22011.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1458bp|location=Sequence derived from alignment at M-pyrifera_M_contig95467:2..730+ (Macrocystis pyrifera P11B4 male)
ATCGAGATCACACGGGGTGCCGCTCCCGTCGCCTTCCTGATCTCGGGCAT
CGTCGCCCTGCTCACCAGCTATTCGTATCTCAAATTAACATTGCGGTTTC
CCGGCGAGGGCGGAACCGTTGAGTATCTCAACCGCGCCTTCGGCAGTGGT
ATCCTGACCGGTGCCGCCAACATACTGCTGTTGATGTGTTACATCGTGCT
GGTTGCTATCTACGCCTATGCCTTTGGCAGCTATGGTGCCAGCGTGTTCC
CCGCCGATCAGAATAACTTCTGGCAACATACACTGGTCAGTGGTGTCATC
ATCGGCTTATGCCTTCTCAATATCGTCAGCACCGAACTGGTGATCCGTTC
GGAGAACTTCTTTAACGGCGTCAAAATGGTCCTGCTGGCGATATTCGTCG
TGGCCGGTCTGCTGACACCCATGGACTGGACGCGGCTCGGTCCGGAAAAC
TATGTCTCCCCCGTCGGCCTCATTGCCGGAGCCATGCTCATTTTCCTGAA
CTATGAAGGCTTCGAATTAATCGCCAATGCTTCCAATGACGTGGCCAACC
CGAAGAAAACCCTACCTGTAGCCTACCTCGGTGGAATCTTTGTGGTGATG
GTGATCTATGTATTGATCGTGGGAGTCGTGGTTGGACACATGAGTTTCGC
CGAAGTCGGAAAAGTGAGCGATCGCGCGCTATCGGTGGCGGCAACCCGCA
TTGCAGGCACCCCCGGCTTCATCGCAATTATCGAGATCACACGGGGTGCC
GCTCCCGTCGCCTTCCTGATCTCGGGCATCGTCGCCCTGCTCACCAGCTA
TTCGTATCTCAAATTAACATTGCGGTTTCCCGGCGAGGGCGGAACCGTTG
AGTATCTCAACCGCGCCTTCGGCAGTGGTATCCTGACCGGTGCCGCCAAC
ATACTGCTGTTGATGTGTTACATCGTGCTGGTTGCTATCTACGCCTATGC
CTTTGGCAGCTATGGTGCCAGCGTGTTCCCCGCCGATCAGAATAACTTCT
GGCAACATACACTGGTCAGTGGTGTCATCATCGGCTTATGCCTTCTCAAT
ATCGTCAGCACCGAACTGGTGATCCGTTCGGAGAACTTCTTTAACGGCGT
CAAAATGGTCCTGCTGGCGATATTCGTCGTGGCCGGTCTGCTGACACCCA
TGGACTGGACGCGGCTCGGTCCGGAAAACTATGTCTCCCCCGTCGGCCTC
ATTGCCGGAGCCATGCTCATTTTCCTGAACTATGAAGGCTTCGAATTAAT
CGCCAATGCTTCCAATGACGTGGCCAACCCGAAGAAAACCCTACCTGTAG
CCTACCTCGGTGGAATCTTTGTGGTGATGGTGATCTATGTATTGATCGTG
GGAGTCGTGGTTGGACACATGAGTTTCGCCGAAGTCGGAAAAGTGAGCGA
TCGCGCGCTATCGGTGGCGGCAACCCGCATTGCAGGCACCCCCGGCTTCA
TCGCAATT
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