mRNA_M-pyrifera_M_contig95425.22001.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: A0A7X6P1E1_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P1E1_9ACTN) HSP 1 Score: 169 bits (428), Expect = 1.270e-48 Identity = 92/152 (60.53%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRIDDRRSAGITAGD---------GEA-GTTSPERTKSPPMSCGCGRKMRMAPSVAAQGPVHCGMCGVEFTI 429
DVFEVLLHEAAHGLN RGVKD SRGGRYHNA+FKATAIEVGL V MPPYGWAKT + P ++ Y+ EI + D +RIARR+ RS+ GD GE G +P+R K P CGCGRKMRMAPSV A+GPV C +C EFT+
Sbjct: 45 DVFEVLLHEAAHGLNTSRGVKDTSRGGRYHNAKFKATAIEVGLRVGSMPPYGWAKTELAPATVEHYSSEIDRIGDEMRIARRM--TRSSVERGGDAGGPDDPTVGEVEGGGAPQRPK--PAECGCGRKMRMAPSVLARGPVVCSLCRTEFTV 192
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: A0A7J9XW56_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A7J9XW56_9PSEU) HSP 1 Score: 126 bits (316), Expect = 1.290e-33 Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRIDDRRSAGITAGDGEAGTTSPERTKSPPMSCGCGRKMRMAPSVAAQGPVHCGMCGVEFT 426
DV LLHEAAH L VRG+KD SR GR+HNARFK A EVG++ P GW+ TS+ YA I L A+R+ R+A +T G G +TK+PP C CGR++R+AP+V A GP+ CG+CG +FT
Sbjct: 81 DVLATLLHEAAHALADVRGIKDTSRQGRWHNARFKQLATEVGIETTEDPRIGWSPTSLPEATRADYADTITALGAALRM------HRTAEVTGGQGS-------KTKTPPCVCDCGRRIRVAPTVLAAGPITCGVCGTDFT 208
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: A0A7V9BMY9_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardiales bacterium TaxID=2201155 RepID=A0A7V9BMY9_9PSEU) HSP 1 Score: 120 bits (302), Expect = 1.110e-31 Identity = 65/140 (46.43%), Postives = 89/140 (63.57%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRIDDRRSAGITAGDGEAGTTSPERTKSPPMSCGCGRKMRMAPSVAAQGPVHCGMCGVEF 423
DV LLHEAAH L VRG+KD SR GR+HNA+FKA A E+G++V P GW+ T++ ++YA I +L A+R+ R ++ I AG G A +P PP CGCGRK+R++P+V A GP+ CG+CG +F
Sbjct: 47 DVLATLLHEAAHALAHVRGIKDTSRQGRWHNAKFKALAEELGIEVTKDPRIGWSPTAIPTSTRERYAEVIDELGRALRLYRSVE------IGAG-GRAKKPTP-----PPCVCGCGRKIRLSPTVLAAGPITCGVCGSDF 174
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: A0A7J9XSH8_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A7J9XSH8_9PSEU) HSP 1 Score: 119 bits (298), Expect = 9.800e-31 Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRIDDRRSAGITAGDGEAGTTSPERTKSPPMSCGCGRKMRMAPSVAAQGPVHCGMCGVEFT 426
+V LLHEAAH L VRG++D SR GR+HNARFKA A EVG+ V P GW+ T++T + YA I L A+R+ R D A P +T +PP C CGR++R+A SV A GP+ CG+CG +FT
Sbjct: 95 EVLATLLHEAAHALAHVRGIQDTSRQGRWHNARFKALATEVGITVTKDPRLGWSPTALTADTATAYADTITALGKALRLHRATD------------AAPVRGPRKT-TPPCVCDCGRRIRVAASVLAAGPITCGLCGTDFT 222
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: A0A7J9XKH5_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A7J9XKH5_9PSEU) HSP 1 Score: 114 bits (286), Expect = 3.470e-29 Identity = 66/141 (46.81%), Postives = 84/141 (59.57%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRIDDRRSAGITAGDGEAGTTSPERTKSPPMS-CGCGRKMRMAPSVAAQGPVHCGMCGVEF 423
DV LLHEAAH L VRG+KD SR GR+HNARFK A EVG++ P GW+ T++ YA IA L A+R+ RSA +T DG A +TK+PP C CGR++R AP+V A GP+ C +CG +F
Sbjct: 75 DVLATLLHEAAHALANVRGIKDTSRQGRWHNARFKQLAAEVGIETTKDPRLGWSPTTLPEATRTTYADTIAALGAALRM------HRSAELT--DGRA-----TKTKAPPTCVCDCGRRIRFAPTVLAAGPITCVVCGTDF 202
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: A0A1Q8LHJ9_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardia sp. Ae717_Ps2 TaxID=1885573 RepID=A0A1Q8LHJ9_9PSEU) HSP 1 Score: 114 bits (284), Expect = 1.690e-28 Identity = 60/140 (42.86%), Postives = 78/140 (55.71%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRIDDRRSAGITAGDGEAGTTSPERTKSPPMSCGCGRKMRMAPSVAAQGPVHCGMCGVEF 423
DV LLHEAAH L RG++D SR GR+HNARFKA A EVG+ VE P GW+ T++ Y I L+ A+R+ R + G P++ PP CGCGR++R+A SV GP+ CG+C EF
Sbjct: 108 DVLGTLLHEAAHALAHARGIQDTSRQGRWHNARFKAIAAEVGIAVEKDPKLGWSPTTVPDATQAAYGEVIEQLRGALRMRRASE------------SGGPAKPKKPGPPPCVCGCGRRIRVAASVRELGPIVCGVCDQEF 235
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: A0A4Q7V417_9PSEU (Uncharacterized protein n=2 Tax=Pseudonocardia sediminis TaxID=1397368 RepID=A0A4Q7V417_9PSEU) HSP 1 Score: 114 bits (285), Expect = 1.720e-28 Identity = 64/140 (45.71%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRIDDRRSAGITAGDGEAGTTSPERTKSPPMSCGCGRKMRMAPSVAAQGPVHCGMCGVEF 423
DVF LLHEAAH L VRGV+D SR GR+HNARFKA A E+G+ VE P GW+ T++ YA I +L A+R+ R A T G G P++ P C CGR++R+A SV GP+ CG+C EF
Sbjct: 113 DVFGTLLHEAAHALAHVRGVQDTSRQGRWHNARFKAFAEEIGVAVEKDPKLGWSPTTVPDATRAVYAAAIGELGRALRMRR-------ASETTG----GAEKPKKPGPPACVCACGRRIRVAVSVREAGPILCGICEAEF 241
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: UPI001B7CFB69 (hypothetical protein n=1 Tax=Pseudonocardia bannensis TaxID=630973 RepID=UPI001B7CFB69) HSP 1 Score: 112 bits (281), Expect = 2.160e-28 Identity = 61/142 (42.96%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRIDDRRSAGITAGDGEAGTTSPERTKSPPMSCGCGRKMRMAPSVAAQGPVHCGMCGVEFTI 429
+V LLHEAAH L VRGVKD SR GR+HNARFKA A E+G++V GW+ TS+ + YA I +L A+R+ R ++ +G+G +P CGC RK+R++ SV A GP+ CG CG +F I
Sbjct: 58 EVLATLLHEAAHALAHVRGVKDTSRQGRWHNARFKALAEELGIEVTKDAKIGWSPTSIPTATREAYASTIEELGAALRLIRAVE-------VSGEGRKSKPAPSAV------CGCDRKIRVSKSVLAAGPILCGACGTKFAI 186
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: UPI0018E9871D (hypothetical protein n=1 Tax=Kineosporia sp. A_224 TaxID=1962180 RepID=UPI0018E9871D) HSP 1 Score: 113 bits (282), Expect = 7.350e-28 Identity = 63/151 (41.72%), Postives = 85/151 (56.29%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRI---------DDRRSAGITAGDGEAGTTSPERTKSPPMS-CGCGRKMRMAPSVAAQGPVHCGMCGVEFT 426
DV LLHEA H L VRGVKD SR GRYHN +F+ A E+GLDV +P GW+ T + +YA + L A+ + RR DD +AG G G+T P +++ + CGCGR++R+ SV A GP+ CG+CG F+
Sbjct: 101 DVLGTLLHEATHALAHVRGVKDCSRQGRYHNRKFRDLAEEMGLDVREVPVIGWSDTHVPAATQDEYAATLTALTAALTLHRRAEGAMPVTAPDDEAAAGADTNTGN-GSTGPNASRNGAAARCGCGRRIRVTASVLALGPITCGLCGQPFS 250
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Match: UPI0018EA269D (hypothetical protein n=1 Tax=Kineosporia sp. R_H_3 TaxID=1961848 RepID=UPI0018EA269D) HSP 1 Score: 112 bits (279), Expect = 1.920e-27 Identity = 62/151 (41.06%), Postives = 81/151 (53.64%), Query Frame = 1
Query: 4 DVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPPYGWAKTSMTPEALKQYAVEIADLKDAIRIARRI----------DDRRSAGITAGDGEAGTTSPERTKSPPMSCGCGRKMRMAPSVAAQGPVHCGMCGVEFT 426
DV LLHEA H L VRGVKD SR GRYHN +F+ A E+GLDV +P GW+ T + +YA + L A+ + RR D+ A + G G AG S + CGCGR++R+ SV A GP+ CG+CG F+
Sbjct: 108 DVLGTLLHEATHALAHVRGVKDCSRQGRYHNRKFRDLAEELGLDVREVPVIGWSDTHVPAATRDEYAATLTSLTAALTLHRRAEGGMPVTAPDDEAAGADPSTGSGSAGPNSSRNGAA--ARCGCGRRIRVTASVLALGPITCGLCGQPFS 256 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95425.22001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95425.22001.1 >prot_M-pyrifera_M_contig95425.22001.1 ID=prot_M-pyrifera_M_contig95425.22001.1|Name=mRNA_M-pyrifera_M_contig95425.22001.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp EDVFEVLLHEAAHGLNAVRGVKDVSRGGRYHNARFKATAIEVGLDVEMMPback to top mRNA from alignment at M-pyrifera_M_contig95425:15..443+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95425.22001.1 ID=mRNA_M-pyrifera_M_contig95425.22001.1|Name=mRNA_M-pyrifera_M_contig95425.22001.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig95425:15..443+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95425:15..443+ >mRNA_M-pyrifera_M_contig95425.22001.1 ID=mRNA_M-pyrifera_M_contig95425.22001.1|Name=mRNA_M-pyrifera_M_contig95425.22001.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig95425:15..443+ (Macrocystis pyrifera P11B4 male)back to top |