mRNA_M-pyrifera_M_contig95386.22000.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A0L0FF54_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FF54_9EUKA) HSP 1 Score: 84.7 bits (208), Expect = 2.450e-15 Identity = 72/238 (30.25%), Postives = 118/238 (49.58%), Query Frame = 1
Query: 1 WMAVGF--NGDGEVMVGADVVLGEFGGDGVSAKDITAKAVSGVQDDDTATALLQLAELREDVDGKQVLEYTRSVSA-NGFVELEEGQTYALVWARGDSATLTGAHSSSNRGTAQVD--PYSGQVSTPSPAPALRLAHGVLMFLAWGILSPFALFCARC--------CRHQTSWFDYHWKTQVATLLLASIALILIVVATPSHLATT--HSVIGLCTLLLAYLQPLNACIRPHAPPQGK 669
W+ +GF + DG ++ V+GE + V++ +T+++ SGV +A ++ E+ G +++T SA G VE + L+WA G S ++ A+ NRG++ V+ S + S AHG++M AW + P A+F + ++ WF H LLL++IA L + P+ L T H +IGL +++A+LQPLNA IRPH P G+
Sbjct: 407 WIGIGFKDDADGLMVPTQQSVIGEIASNSVASYSLTSRSASGVNP--SAANIVTDGEILRTSTGLTTMKFTIPQSAVPGLVENTDSY---LIWAFGKSESV--AYHGQNRGSSTVNFATCSASSTFSSVNRGALYAHGIMMVSAWMVFIPLAIFSSAFRPLFATLGSKYGIWWFHSHRILNTLGLLLSTIAFGLAFLLVPAGLDFTEPHHIIGLTVMIVAWLQPLNAFIRPHVPEAGE 637
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A0L0FN72_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FN72_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 2.340e-13 Identity = 66/238 (27.73%), Postives = 105/238 (44.12%), Query Frame = 1
Query: 1 WMAVGFNGDGEVMVGADVVLGEFGGDGVSAKDITAKAVSGVQ----DDDTATALLQLAELREDVDGKQVLEYTRSVSANGFVELEEGQTYALVWARGDSATLTGAHSSSNRG--TAQVDPYSGQVSTPSPAPALRLAHGVLMFLAWGILSPFALFCARCCRHQTS---------WFDYHWKTQVATLLLASIALILIVVATPSHLATTHSVIGLCTLLLAYLQPLNACIRPHAPPQGK 669
W+ +GF MV A+ V+G+ V + + A++ +GVQ ++ A +A G T SV + LE+G ++WARG HS ++G T + GQV++ AL +HG++M LAW + P A+ + T WF H +LLA+ A ++ + TH +GL +++ +LQPLNA IRPH G+
Sbjct: 380 WLGIGFGETVGEMVPANAVVGQMSDQSVVSYALLAQSQNGVQPTTSNEVVADGSASIASADSSNAGATGTIITFSVPVSFVPGLEDGGETYIIWARGSGDIAQ--HSPKDQGSYTINLSTCVGQVTSGGFDTALLHSHGIMMALAWMLFVPLAISASALRPAYTQVLGPNKSMWWFHSHRLFNTLAILLATAAFVVAFWLSTEDFVNTHQKLGLAVMIIMWLQPLNAFIRPHIRANGE 615
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A2J6LIS6_LACSA (Uncharacterized protein n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LIS6_LACSA) HSP 1 Score: 68.9 bits (167), Expect = 6.200e-10 Identity = 42/144 (29.17%), Postives = 68/144 (47.22%), Query Frame = 1
Query: 262 LVWARG-----DSATLTGAHSSSNRGTAQVDPYSGQVSTPSPAPALRLAHGVLMFLAWGILSPFALFCARCCRHQTS--WFDYHWKTQVATLLLASIALILIVVATPS-HLATTHSVIGLCTLLLAYLQPLNACIRPHAPPQGK 669
++WA G D+ T + HSS++ +V G + HG +MFLAWG+ P + AR ++ S WF H +Q + L + + ++ HL + H G+ TL+L ++QP+NA RP P G+
Sbjct: 459 VIWAMGTKWSADNLTDSNMHSSTSSKAVRVSLLRGSAEADEDLKPVLAVHGFMMFLAWGMFLPGGVLAARYMKNFNSDFWFKIHVYSQCSGLTITFLGILFAAAEVRGLHLNSLHVKFGILTLILGFIQPINAYFRPKEAPDGE 602
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A6S7KNF2_LACSI (Uncharacterized protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7KNF2_LACSI) HSP 1 Score: 68.6 bits (166), Expect = 8.870e-10 Identity = 42/144 (29.17%), Postives = 67/144 (46.53%), Query Frame = 1
Query: 262 LVWARG-----DSATLTGAHSSSNRGTAQVDPYSGQVSTPSPAPALRLAHGVLMFLAWGILSPFALFCARCCRHQTS--WFDYHWKTQVATLLLASIALILIVVATPS-HLATTHSVIGLCTLLLAYLQPLNACIRPHAPPQGK 669
++WA G D+ T + HSS++ +V G + HG +MFLAWG+ P + AR ++ WF H +Q + L + + ++ HL + H G+ TL+L +LQP+NA RP P G+
Sbjct: 641 VMWAMGSKWSADNLTASNMHSSTSSKAVRVSLLRGSAEADEDLKPVLAVHGFMMFLAWGMFLPGGVLAARYMKNFNGDFWFKIHVYSQCSGLTITFLGILFAAAEVRGLHLNSLHVKFGILTLILGFLQPINAYFRPKEAPDGE 784
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A7S2U5T0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5T0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.180e-9 Identity = 40/101 (39.60%), Postives = 52/101 (51.49%), Query Frame = 1
Query: 388 LAHGVLMFLAWGILSPFALFCARCCRHQTS--WFDYHWKTQVATLLLASIALILIV-----VATPSHL-ATTHSVIGLCTLLLAYLQPLNACIRPHAPPQG 666
L HG LM + WG L P AR +H+ WF H Q LLLA I I+ + H+ H+V+G ++L +LQPLNA IRPHAP +G
Sbjct: 235 LRHGSLMLIGWGFLLPSGAIMARLFKHRPDGLWFKIHIFVQTLGLLLAGIGFIIALRNFDTFNGKDHIKGYAHAVMGTTVMVLGFLQPLNAMIRPHAPQEG 335
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A7S4QH50_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QH50_9DINO) HSP 1 Score: 65.9 bits (159), Expect = 6.690e-9 Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 1
Query: 349 GQVS-TPSPAPALRLAHGVLMFLAWGILSPFALFCARCCRH--------QTSWFDYHWKTQVATLLLASIALILIVV----ATPSHLATTHSVIGLCTLLLAYLQPLNACIRPHAPPQGK 669
GQ S T A LR+AH M LAWG+L P +F + R + WF H LL + +LI + T HL + + +GL T ++A+ QPLNA +RPHAP G+
Sbjct: 433 GQASVTCGVASGLRIAHATCMILAWGVLIPIGIFSSAFLRGVLGKTASGKDVWFIVHRICNGFGWLLTVVGAVLIAIDVDNGTRHHLQSVKAWMGLVTFIIAFFQPLNALVRPHAPKLGE 552
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A4P1QW17_LUPAN (Uncharacterized protein n=3 Tax=Lupinus TaxID=3869 RepID=A0A4P1QW17_LUPAN) HSP 1 Score: 65.5 bits (158), Expect = 9.820e-9 Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 1
Query: 388 LAHGVLMFLAWGILSPFALFCARCCRHQTS--WFDYHWKTQVATLLLASIALILIVVATPS-HLATTHSVIGLCTLLLAYLQPLNACIRPHAPPQGK 669
+ HG +MF AWG+L P + AR +H S W+ H Q + L + +AL+ V ++ + H G +LLA +QP+NAC+RP P G+
Sbjct: 684 VVHGFMMFFAWGVLLPGGILAARYLKHLKSDGWYKIHVYLQYSGLSIVLLALLFAVAELQGFYVNSAHVKFGFAAILLACIQPMNACLRPQKPANGE 780
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A0D9WSN5_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WSN5_9ORYZ) HSP 1 Score: 65.1 bits (157), Expect = 1.310e-8 Identity = 45/177 (25.42%), Postives = 84/177 (47.46%), Query Frame = 1
Query: 184 GKQVLEYTRSVS---ANGFVE----LEEGQTYALVWARGDSAT-----LTGAHSSSNRGTAQVDPYSGQVSTPSPAPALRLAHGVLMFLAWGILSPFALFCARCCRHQTS--WFDYHWKTQVATLLLASIALILIVVATPSH-LATTHSVIGLCTLLLAYLQPLNACIRPHAPPQGK 669
G+ V E+TR +S +G +E ++ ++WA G + + HS ++ ++ +G + HG +MF++WG+L P + AR +H WF H Q + +++ + + + +TH+ IG+ +LLA+LQP+NA +RPH +G+
Sbjct: 566 GEIVFEFTRPLSPSSCSGRIECMNIIDPTTPLKVIWAMGSQWSSGRLDVKNMHSITSSRAVRILLLAGTAEAEEDLRPVLAVHGFMMFVSWGLLLPGGVMAARYLKHMKGDIWFQAHSYLQCSGMVVMFLGFLFAIAELRGFSFKSTHAKIGILGVLLAFLQPINAYLRPHLGEKGE 742
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A251TF04_HELAN (Putative DOMON domain, Cytochrome b561/ferric reductase transmembrane, DM13 domain protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TF04_HELAN) HSP 1 Score: 64.3 bits (155), Expect = 2.470e-8 Identity = 41/145 (28.28%), Postives = 65/145 (44.83%), Query Frame = 1
Query: 238 LEEGQTYALVWARG-----DSATLTGAHSSSNRGTAQVDPYSGQVSTPSPAPALRLAHGVLMFLAWGILSPFALFCARCCRHQTS--WFDYHWKTQVATLLLASIALILIVVATPS-HLATTHSVIGLCTLLLAYLQPLNACIRP 648
+E + ++WA G D T + HS ++ +V G + HG +MFLAWG+ P + AR +H WF H TQ + L + + ++ H+ H IG+ T++L +QP+NA IRP
Sbjct: 730 VEPTSPFPIIWAMGAKWSSDHLTQSNMHSVTSNKPVRVSLIYGSAEVEEDLRPVLAVHGFMMFLAWGMFLPCGILAARYMKHVDGDVWFKIHVYTQWSGLTITFLGILFAAAELRGLHINLLHVKIGILTVILGCIQPINAYIRP 874
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Match: A0A0L0GFD5_9EUKA (Cytochrome b561 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GFD5_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 2.520e-8 Identity = 64/232 (27.59%), Postives = 109/232 (46.98%), Query Frame = 1
Query: 1 WMAVGFNGDGEVMVGADVVLGEFGGDGVSAKDITAKAVSGVQ----DDDTATALLQLAELREDVDGKQVLEYTRSVSANGFVELEEGQTYALVWARGDSATLTGAHSSSNRGTAQVDPYS--GQVSTPSPAPALRLAHGVLMFLAWGILSPFALFCARC------CRHQTS--WFDYHWKTQVATLLLASIAL-ILIVVATPSHLATTHSVIGLCTLLLAYLQPLNACIRPH 651
W+ VGF M+ A V++G + V A + T++ +GV D T A Q+ + E L +T VS LE G +V+A G A G H + NRG+ V+ + G ++ + LAHG+LM LAW +L+P A+F + + T WF H + L+ +++ + ++ + + H ++GLC +++ ++QP NA +RP
Sbjct: 73 WLGVGFAEVPGSMIPAKVIIGTAEPNTVQAYETTSRNGAGVNPATFDTVTYGAFTQVEDKAE-----TTLSFT--VSQRTVPGLESGAETYMVFAYG--AGEFGYHGT-NRGSVTVNLVTCEGTLTENTTYRKALLAHGILMALAWLLLTPIAIFSSAFRPIFTHFKDDTGLWWFHSHVTMNILGLMASTVGFGVSFLLVSQINFTDKHHILGLCVMIIGWIQPFNALLRPR 294 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95386.22000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95386.22000.1 >prot_M-pyrifera_M_contig95386.22000.1 ID=prot_M-pyrifera_M_contig95386.22000.1|Name=mRNA_M-pyrifera_M_contig95386.22000.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp MAVGFNGDGEVMVGADVVLGEFGGDGVSAKDITAKAVSGVQDDDTATALLback to top mRNA from alignment at M-pyrifera_M_contig95386:64..732+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95386.22000.1 ID=mRNA_M-pyrifera_M_contig95386.22000.1|Name=mRNA_M-pyrifera_M_contig95386.22000.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=669bp|location=Sequence derived from alignment at M-pyrifera_M_contig95386:64..732+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95386:64..732+ >mRNA_M-pyrifera_M_contig95386.22000.1 ID=mRNA_M-pyrifera_M_contig95386.22000.1|Name=mRNA_M-pyrifera_M_contig95386.22000.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig95386:64..732+ (Macrocystis pyrifera P11B4 male)back to top |