mRNA_M-pyrifera_M_contig95245.21972.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95245.21972.1
Unique NamemRNA_M-pyrifera_M_contig95245.21972.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A3D1GDV5_9BACT (AcrB/AcrD/AcrF family protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GDV5_9BACT)

HSP 1 Score: 366 bits (939), Expect = 1.490e-117
Identity = 191/244 (78.28%), Postives = 214/244 (87.70%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            FG+T +LI  S  LIP IPVELAPQ+DADEI IDLEMADGT IAVQN YL E++ IVL+ LPM DVKNVTT+VR+GRAEVEIAMV ASER   TS +A+ IRK+VEGKIPGADIRV AQSGLWILRRIFGSGGG EA+Q+QLRGYDI +SYEIAQ +KL+ME +PG+TG+RV RSEGRPEQRIL DREKIADLGLSVNEVASVIQTNIGGS+AG +R GGDEYPI VRLRP+DRLS+ DLDNIS
Sbjct:  528 FGVTFLLIAASAALIPTIPVELAPQTDADEIDIDLEMADGTNIAVQNLYLKELQEIVLSVLPMEDVKNVTTDVRDGRAEVEIAMVSASERKSKTSEVADEIRKKVEGKIPGADIRVSAQSGLWILRRIFGSGGGAEAIQVQLRGYDIARSYEIAQDIKLEMEKVPGVTGARVDRSEGRPEQRILFDREKIADLGLSVNEVASVIQTNIGGSQAGVFRDGGDEYPIMVRLRPEDRLSTQDLDNIS 771          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A2D8CHK5_9BACT (Acriflavin resistance protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CHK5_9BACT)

HSP 1 Score: 352 bits (903), Expect = 2.610e-111
Identity = 182/244 (74.59%), Postives = 211/244 (86.48%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            F +T VL++GS+LL+P+IPVELAPQ+DADEI IDLEMADGT IAVQN YL E+E IV A LPM DV+  TTEVR+GRAEVEIAMVP SERS STS +A  IR+ + GK+PGADIRV AQSGLWILRR+FG GGG++ VQ +LRGYDI K+YEIAQ++KL++ENIPGI   R GRSEG PE+RIL DREKIADLGLSV EVA VIQTNIGGSRAG+YRIGGDEYPITVRL+P+DRL +LD+DNIS
Sbjct:  527 FVVTAVLVVGSFLLVPIIPVELAPQTDADEIDIDLEMADGTNIAVQNLYLKELEDIVRATLPMEDVEYFTTEVRDGRAEVEIAMVPQSERSQSTSDLAAEIRENLTGKVPGADIRVDAQSGLWILRRVFGGGGGED-VQFELRGYDIDKAYEIAQEIKLRVENIPGIVEVRAGRSEGTPEERILFDREKIADLGLSVREVAQVIQTNIGGSRAGSYRIGGDEYPITVRLQPEDRLGTLDIDNIS 769          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A521C401_9BACT (Hydrophobic/amphiphilic exporter-1, HAE1 family n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521C401_9BACT)

HSP 1 Score: 348 bits (894), Expect = 5.590e-110
Identity = 178/244 (72.95%), Postives = 213/244 (87.30%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            FGIT VL++ S+LL+P+IPVELAPQ+DADEI IDLEMADGT IAVQN YL E+E IV A +PM DV+  TTEVR+GRAEVE+AMVP S+RS STS +A++IR+ + GKIPGADIRV A SGLWILRR+FG GGG E VQ +LRGYDI+K+YE+AQ++KL++E IPGI   RVGRSEG PE+RI+ DREKIADLG+S+N+VA +IQTNIGGSRAG+YRIGGDEYPITVRLRP+DRL +LDLDNIS
Sbjct:  527 FGITGVLVVASFLLLPIIPVELAPQTDADEIDIDLEMADGTNIAVQNLYLKELENIVRATVPMEDVEFFTTEVRDGRAEVELAMVPQSKRSQSTSELADQIRENLSGKIPGADIRVNAGSGLWILRRVFG-GGGAEDVQFELRGYDIEKAYELAQQIKLRVEEIPGIMEVRVGRSEGSPEERIIFDREKIADLGMSINQVAQIIQTNIGGSRAGSYRIGGDEYPITVRLRPEDRLGTLDLDNIS 769          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A2D9FS99_9BACT (Acriflavin resistance protein n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FS99_9BACT)

HSP 1 Score: 341 bits (875), Expect = 3.160e-107
Identity = 174/244 (71.31%), Postives = 209/244 (85.66%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            FG+T VL+IGS+L IP+IPVELAPQ+DADEI IDL+MADGT IAVQN Y+ E+E IV + LPM DV+  TTEVR+GR+E+EIAMVP SERS STS  AE IR+ +EGKIPGADIRV AQSGLWI+RRIFG GGG++ VQ +LRGYD+ ++YEIAQ +KL++E IPGI   R  +SEG PE+RI+ +RE+IADLGLSV EVA +IQTNIGGSRAG+YRIGGDEYPITVRLRP+DRL +LD+DNIS
Sbjct:  527 FGVTGVLVIGSFLAIPIIPVELAPQTDADEIDIDLQMADGTNIAVQNLYMKELEEIVKSTLPMDDVEYFTTEVRDGRSEIEIAMVPQSERSQSTSEFAEEIRENLEGKIPGADIRVSAQSGLWIMRRIFGGGGGED-VQFELRGYDLDRAYEIAQDIKLRVETIPGIVEVRSDQSEGSPEERIIFNRERIADLGLSVREVAEIIQTNIGGSRAGSYRIGGDEYPITVRLRPEDRLGTLDIDNIS 769          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: UPI000CD856A6 (efflux RND transporter permease subunit n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD856A6)

HSP 1 Score: 341 bits (874), Expect = 4.500e-107
Identity = 175/244 (71.72%), Postives = 209/244 (85.66%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            FGIT  L++GS+L +P IPVELAPQ+DADEI IDL++ADGT IAVQN YL E+E IV A LPM DV+  TTEVR+GRAEVEIAMVP SERS STS +AE IR+ +EG+IPGADIRV AQSGLWI+RRIFG GGG E +Q +LRGYD++K+YE+AQ +KL++E +PGI   R G++EG PE+RIL DREKIADLGLSV +VA VIQTNIGGSRAG+YRIGGDEYPITVRLRP+DRL +LD++NIS
Sbjct:  527 FGITAFLVVGSFLAVPTIPVELAPQTDADEIDIDLQLADGTNIAVQNLYLKELEEIVRATLPMDDVEYFTTEVRDGRAEVEIAMVPQSERSQSTSELAEEIRENLEGQIPGADIRVSAQSGLWIMRRIFG-GGGAEDLQFELRGYDLEKAYELAQDIKLRVEKLPGIVEVRSGQTEGTPEERILFDREKIADLGLSVRQVAQVIQTNIGGSRAGSYRIGGDEYPITVRLRPEDRLGTLDINNIS 769          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A6M1TCQ7_9BACT (Efflux RND transporter permease subunit n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1TCQ7_9BACT)

HSP 1 Score: 329 bits (843), Expect = 1.600e-102
Identity = 167/244 (68.44%), Postives = 212/244 (86.89%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            FGIT VL+IGS+L++P IP+ELAPQSDADEI +D EMA+GT IAVQNQYL E+E +V A+LPM DV+++TT+VR+GRAEVEIAMV ASER  STS +A++IRK+V+G IPG DIRV AQSGLWILRRIFGSGGG++ V++QLRGY+++++ EI++++KL++E IP I G RV R EGRPEQ I  DREKIADLGL+V EVA VIQTN+GGSR+G +R+GGDE+PI VRL+P+DRLS+ DL+NIS
Sbjct:  530 FGITGVLVIGSFLVVPYIPMELAPQSDADEIDVDFEMAEGTNIAVQNQYLKELEKVVRASLPMEDVEHLTTDVRDGRAEVEIAMVEASERGISTSELADQIRKKVQGIIPGGDIRVDAQSGLWILRRIFGSGGGED-VEVQLRGYNLEQAEEISKQIKLRIEEIPEINGVRVDRREGRPEQNIRFDREKIADLGLTVREVAQVIQTNVGGSRSGTFRVGGDEFPINVRLQPKDRLSTTDLENIS 772          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A2A2GBK4_9BACT (Acriflavin resistance protein n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2GBK4_9BACT)

HSP 1 Score: 324 bits (831), Expect = 8.830e-101
Identity = 167/244 (68.44%), Postives = 208/244 (85.25%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            + IT VL++GS LLIPLIPVELAPQSDADEI ID  MA+GT IAVQN+YL E+ET+V A+LPM DV+++TT+VR+GRAEVEIAMV ASERS STS IA++IR+ V G +PG DIRV AQSGLWILRRIFGSGGG EAV++QLRGYD++++  +++++K +ME IP +TG R  R EGRPEQ ++ DREKIADLGL+V+ VA VIQTN+GGSRAG +R GGDE+PI VRL+P+DRLS+ DL+NIS
Sbjct:  530 YTITGVLVLGSVLLIPLIPVELAPQSDADEIDIDFMMAEGTNIAVQNEYLKELETVVRAHLPMDDVEHITTDVRDGRAEVEIAMVEASERSMSTSKIADQIRENVAGTVPGGDIRVSAQSGLWILRRIFGSGGG-EAVELQLRGYDLEQAKTLSEEIKKRMEQIPEVTGVRTDRREGRPEQNLIFDREKIADLGLTVSGVARVIQTNVGGSRAGTFREGGDEFPIRVRLQPEDRLSTKDLENIS 772          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A1M5FNJ9_9BACT (Hydrophobic/amphiphilic exporter-1, HAE1 family n=2 Tax=Aliifodinibius TaxID=1397107 RepID=A0A1M5FNJ9_9BACT)

HSP 1 Score: 322 bits (826), Expect = 4.620e-100
Identity = 162/244 (66.39%), Postives = 205/244 (84.02%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            FG+T  L+IG  LLIPLIPVELAPQSDADEI +D  MA+GT IAVQN+YL E+E +V ANLPM DV+++TT+VR+GRAEVEIAMV AS+RS STS IA++IR+ V G +PG DIRV AQSGLW+LRR+FGSGGG+E V++QLRGY++ ++  +++++K +ME IP + G R  R EGRPEQ ++ +REKIADLGL+V EVA VIQTN+GGSRAG YR+GGDE+PI VRLRP+DRLS+ DL+NIS
Sbjct:  530 FGVTGALVIGCVLLIPLIPVELAPQSDADEIDVDFMMAEGTNIAVQNEYLQELEQVVRANLPMEDVRHITTDVRDGRAEVEIAMVEASQRSMSTSRIADQIRENVAGLVPGGDIRVSAQSGLWMLRRLFGSGGGEE-VEVQLRGYNLDQAKTLSEEIKRRMEEIPEVAGVRTDRREGRPEQNMVFNREKIADLGLTVREVAQVIQTNVGGSRAGTYRVGGDEFPIRVRLRPEDRLSTTDLENIS 772          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A5D3YL36_9BACT (Hydrophobic/amphiphilic exporter-1, HAE1 family n=1 Tax=Fodinibius salinus TaxID=860790 RepID=A0A5D3YL36_9BACT)

HSP 1 Score: 319 bits (817), Expect = 9.470e-99
Identity = 161/244 (65.98%), Postives = 205/244 (84.02%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            F    +L+IG +L++P IPVELAPQSDADEI ID  MA+GT IAVQNQYL E+E +V ANLPM +V+++TT+VR+GRAEVE+AMV AS+RS STS IA+ +R+QV G IPG DIRV AQSGLWILRR+FGSGGG+E V++QLRGY++ ++ +I+Q +K +ME +P I G R+GR EG+PE+ I  +REKIADLGLSV+EVA ++QTN+GGSRAG+YR  GDEYPITVRL+P+DRLS+ DLDNIS
Sbjct:  530 FTSAAILVIGCFLVLPTIPVELAPQSDADEIDIDFMMAEGTNIAVQNQYLQELEKVVRANLPMENVEHLTTDVRDGRAEVEVAMVEASKRSQSTSKIADHLREQVSGTIPGGDIRVSAQSGLWILRRLFGSGGGEE-VELQLRGYNLDRAKKISQNIKQRMEQVPEIKGVRIGRREGQPEENITFNREKIADLGLSVSEVARIVQTNVGGSRAGSYREEGDEYPITVRLQPEDRLSTTDLDNIS 772          
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Match: A0A1B6Y5V6_9BACT (Acriflavin resistance protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y5V6_9BACT)

HSP 1 Score: 315 bits (808), Expect = 1.850e-97
Identity = 159/244 (65.16%), Postives = 203/244 (83.20%), Query Frame = 1
Query:    1 FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYLHEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAERIRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKSYEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEVASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS 732
            F +T VL+IGS+LL P+IPVELAPQ+DADEI IDL MADGT I V N+YL E+E ++ + +P  D++++TT+VR+GRAEVEI MV AS+RS STS +AE I+++VEG I GA+IRV AQSGLWILRR+FGSGG ++ +Q+++RGYDI +SY+IAQ +KL++E I GITG  V RSEG PE+ I+ DREKIA LGL++N VA  IQTNIGGSRAG +R+ GDEYPITVRLRP+DRL++ DLDNIS
Sbjct:  528 FAVTGVLVIGSFLLAPVIPVELAPQTDADEIDIDLRMADGTNITVINEYLAELEQVIRSTIPFDDIEHLTTDVRDGRAEVEITMVEASKRSRSTSELAEEIQQKVEGAIAGANIRVSAQSGLWILRRVFGSGGAED-LQLEVRGYDIDRSYQIAQDIKLELEKIEGITGVEVDRSEGTPEENIVFDREKIAQLGLTINSVARTIQTNIGGSRAGAFRVSGDEYPITVRLRPEDRLNTQDLDNIS 770          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95245.21972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D1GDV5_9BACT1.490e-11778.28AcrB/AcrD/AcrF family protein (Fragment) n=1 Tax=B... [more]
A0A2D8CHK5_9BACT2.610e-11174.59Acriflavin resistance protein n=2 Tax=Balneolaceae... [more]
A0A521C401_9BACT5.590e-11072.95Hydrophobic/amphiphilic exporter-1, HAE1 family n=... [more]
A0A2D9FS99_9BACT3.160e-10771.31Acriflavin resistance protein n=3 Tax=Balneolaceae... [more]
UPI000CD856A64.500e-10771.72efflux RND transporter permease subunit n=1 Tax=Gr... [more]
A0A6M1TCQ7_9BACT1.600e-10268.44Efflux RND transporter permease subunit n=1 Tax=Ba... [more]
A0A2A2GBK4_9BACT8.830e-10168.44Acriflavin resistance protein n=1 Tax=Aliifodinibi... [more]
A0A1M5FNJ9_9BACT4.620e-10066.39Hydrophobic/amphiphilic exporter-1, HAE1 family n=... [more]
A0A5D3YL36_9BACT9.470e-9965.98Hydrophobic/amphiphilic exporter-1, HAE1 family n=... [more]
A0A1B6Y5V6_9BACT1.850e-9765.16Acriflavin resistance protein n=1 Tax=Balneola sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95245contigM-pyrifera_M_contig95245:1..732 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score349.7
Seed ortholog evalue1.1e-93
Seed eggNOG ortholog1121930.AQXG01000001_gene1261
KEGG koko:K03296
KEGG TC2.A.6.2
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EggNOG OGs4NGCI@976,COG0841@1,COG0841@2
COG Functional cat.V
Best tax levelBacteroidetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size732
Cds size732
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816866.888781-CDS-M-pyrifera_M_contig95245:0..7321622816866.888781-CDS-M-pyrifera_M_contig95245:0..732Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95245 1..732 -
1692278224.8835318-CDS-M-pyrifera_M_contig95245:0..7321692278224.8835318-CDS-M-pyrifera_M_contig95245:0..732Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95245 1..732 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95245.21972.1prot_M-pyrifera_M_contig95245.21972.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95245 1..732 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95245.21972.1

>prot_M-pyrifera_M_contig95245.21972.1 ID=prot_M-pyrifera_M_contig95245.21972.1|Name=mRNA_M-pyrifera_M_contig95245.21972.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
FGITTVLIIGSYLLIPLIPVELAPQSDADEIIIDLEMADGTKIAVQNQYL
HEVETIVLANLPMGDVKNVTTEVRNGRAEVEIAMVPASERSGSTSLIAER
IRKQVEGKIPGADIRVRAQSGLWILRRIFGSGGGDEAVQIQLRGYDIQKS
YEIAQKVKLQMENIPGITGSRVGRSEGRPEQRILVDREKIADLGLSVNEV
ASVIQTNIGGSRAGNYRIGGDEYPITVRLRPQDRLSSLDLDNIS
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mRNA from alignment at M-pyrifera_M_contig95245:1..732-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95245.21972.1 ID=mRNA_M-pyrifera_M_contig95245.21972.1|Name=mRNA_M-pyrifera_M_contig95245.21972.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig95245:1..732- (Macrocystis pyrifera P11B4 male)
TTTGGGATTACTACAGTCTTAATTATTGGAAGCTATTTATTAATACCTCT GATTCCAGTTGAACTTGCACCACAAAGTGATGCTGATGAGATTATTATTG ACTTAGAAATGGCTGATGGAACTAAAATTGCCGTTCAAAACCAATACTTA CATGAAGTAGAGACAATTGTACTCGCTAATCTCCCCATGGGCGATGTAAA AAATGTAACAACCGAAGTTAGAAATGGACGAGCTGAAGTAGAAATTGCTA TGGTTCCTGCTTCTGAACGCTCAGGCAGTACTTCACTGATAGCTGAACGC ATTCGAAAACAAGTGGAAGGAAAAATACCTGGTGCAGATATTCGCGTTAG AGCACAATCAGGATTATGGATTCTTAGACGGATTTTTGGAAGCGGTGGCG GTGATGAAGCAGTACAGATACAGCTCCGAGGTTACGATATTCAAAAATCT TATGAGATTGCCCAAAAAGTAAAACTTCAAATGGAAAATATCCCTGGTAT TACAGGATCTCGAGTTGGTAGAAGTGAAGGGCGCCCTGAACAACGTATCT TAGTTGATAGAGAAAAAATTGCCGATCTTGGACTCTCTGTAAATGAAGTA GCTAGTGTAATTCAAACTAATATTGGTGGTAGCCGAGCTGGAAATTACCG AATTGGTGGTGATGAATACCCTATTACAGTTCGTCTTCGACCTCAAGATA GATTAAGCTCTTTAGATTTGGATAACATATCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95245:1..732-

>mRNA_M-pyrifera_M_contig95245.21972.1 ID=mRNA_M-pyrifera_M_contig95245.21972.1|Name=mRNA_M-pyrifera_M_contig95245.21972.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig95245:1..732- (Macrocystis pyrifera P11B4 male)
TTTGGGATTACTACAGTCTTAATTATTGGAAGCTATTTATTAATACCTCT
GATTCCAGTTGAACTTGCACCACAAAGTGATGCTGATGAGATTATTATTG
ACTTAGAAATGGCTGATGGAACTAAAATTGCCGTTCAAAACCAATACTTA
CATGAAGTAGAGACAATTGTACTCGCTAATCTCCCCATGGGCGATGTAAA
AAATGTAACAACCGAAGTTAGAAATGGACGAGCTGAAGTAGAAATTGCTA
TGGTTCCTGCTTCTGAACGCTCAGGCAGTACTTCACTGATAGCTGAACGC
ATTCGAAAACAAGTGGAAGGAAAAATACCTGGTGCAGATATTCGCGTTAG
AGCACAATCAGGATTATGGATTCTTAGACGGATTTTTGGAAGCGGTGGCG
GTGATGAAGCAGTACAGATACAGCTCCGAGGTTACGATATTCAAAAATCT
TATGAGATTGCCCAAAAAGTAAAACTTCAAATGGAAAATATCCCTGGTAT
TACAGGATCTCGAGTTGGTAGAAGTGAAGGGCGCCCTGAACAACGTATCT
TAGTTGATAGAGAAAAAATTGCCGATCTTGGACTCTCTGTAAATGAAGTA
GCTAGTGTAATTCAAACTAATATTGGTGGTAGCCGAGCTGGAAATTACCG
AATTGGTGGTGATGAATACCCTATTACAGTTCGTCTTCGACCTCAAGATA
GATTAAGCTCTTTAGATTTGGATAACATATCCTTTGGGATTACTACAGTC
TTAATTATTGGAAGCTATTTATTAATACCTCTGATTCCAGTTGAACTTGC
ACCACAAAGTGATGCTGATGAGATTATTATTGACTTAGAAATGGCTGATG
GAACTAAAATTGCCGTTCAAAACCAATACTTACATGAAGTAGAGACAATT
GTACTCGCTAATCTCCCCATGGGCGATGTAAAAAATGTAACAACCGAAGT
TAGAAATGGACGAGCTGAAGTAGAAATTGCTATGGTTCCTGCTTCTGAAC
GCTCAGGCAGTACTTCACTGATAGCTGAACGCATTCGAAAACAAGTGGAA
GGAAAAATACCTGGTGCAGATATTCGCGTTAGAGCACAATCAGGATTATG
GATTCTTAGACGGATTTTTGGAAGCGGTGGCGGTGATGAAGCAGTACAGA
TACAGCTCCGAGGTTACGATATTCAAAAATCTTATGAGATTGCCCAAAAA
GTAAAACTTCAAATGGAAAATATCCCTGGTATTACAGGATCTCGAGTTGG
TAGAAGTGAAGGGCGCCCTGAACAACGTATCTTAGTTGATAGAGAAAAAA
TTGCCGATCTTGGACTCTCTGTAAATGAAGTAGCTAGTGTAATTCAAACT
AATATTGGTGGTAGCCGAGCTGGAAATTACCGAATTGGTGGTGATGAATA
CCCTATTACAGTTCGTCTTCGACCTCAAGATAGATTAAGCTCTTTAGATT
TGGATAACATATCC
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