mRNA_M-pyrifera_M_contig95172.21958.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: F2URK2_SALR5 (Glycoside hydrolase family 25 protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2URK2_SALR5) HSP 1 Score: 130 bits (327), Expect = 1.340e-35 Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 7 IYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKYTYGQIWLDIEGPQYWGSQSE-NVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 +YNAWDGGM+ V +Y FP R NPA QI M+ YL FN+ P K +TYG +WLDIEGPQYW S E N F + ++ K GI +YTSESQW PI G+ + SDLPLW Sbjct: 69 VYNAWDGGMDAVSLYFFPDPRADNPAHQINSMVEYLAKFNIKPGDKK-PHTYGMLWLDIEGPQYWTSSKEKNREFFKGLVERAKHHGIKVGVYTSESQWSPIMGDWHGGSDLPLW 182
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: LYSG2_DICDI (Probable GH family 25 lysozyme 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=LYSG2_DICDI) HSP 1 Score: 129 bits (325), Expect = 1.850e-35 Identity = 58/115 (50.43%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 4 QIYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKYTYGQIWLDIEGPQYWGSQSENVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 +YNA D G+ VDVY+FPC CGN A Q M++YLK +N YG +WLDIEGPQYW SQSENVAF +++ +K G + +YTS SQWEPI G S+ PLW Sbjct: 63 SVYNARDAGIEYVDVYMFPCPTCGNGAGQAETMVNYLKGYNA---------NYGMVWLDIEGPQYWMSQSENVAFFESLVAGLKAEGAHIGVYTSASQWEPIMGGYTGGSEFPLW 168
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: F2U4U0_SALR5 (Lysozyme n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U4U0_SALR5) HSP 1 Score: 126 bits (317), Expect = 6.640e-34 Identity = 60/116 (51.72%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 7 IYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVP-NPKGGKYTYGQIWLDIEGPQYWGSQ-SENVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 IYNAWDGGM++VD+Y FPC CGNPA QI M+ L +N+ P N K G TYG +WLDIEGPQYW N F ++S K GI+ +YT +SQW PI G+ + S PLW Sbjct: 86 IYNAWDGGMDHVDIYFFPCPTCGNPAGQIDAMVANLAKYNIKPGNAKPG--TYGMLWLDIEGPQYWTKDVGANRNFFSGLVSQAKAHGIHLGVYTRQSQWSPIMGDWSGGSAFPLW 199
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: UPI000645136B (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000645136B) HSP 1 Score: 122 bits (307), Expect = 1.120e-32 Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 4 QIYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKYTYGQIWLDIEGP-QYWGS-QSENVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 IYNAWDGGM +VD Y+FPCF CG+ A Q+ M++Y+ S+ +G IW DIEGP YW Q N AF +M+S + AG+N +YTS SQWEPI G+ + + PLW Sbjct: 67 SIYNAWDGGMQHVDAYIFPCFSCGDGAGQVVAMVNYINSYQA---------KFGMIWFDIEGPGTYWSDDQGANQAFFNDMVSGAQQAGVNVGVYTSSSQWEPIMGDWSGGASFPLW 174
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: A0A7S0LAX9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LAX9_9EUKA) HSP 1 Score: 122 bits (306), Expect = 2.260e-32 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 1 SQIYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKS----FNVVPN-PKGGKYTYGQIWLDIEGPQYWGSQ-SENVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 + ++NAW+GGM++VD Y+FPC+ CGNPA Q+ + I YL S F N + +YG +W+D+EG QYW S S NV FI++M+ K G++ IYTS SQW PITG + PLW Sbjct: 68 TTMHNAWNGGMSHVDGYIFPCYSCGNPAKQMDDTISYLSSHAVRFGGASNGTESVGVSYGMLWIDVEGTQYWSSSTSNNVNFIQQMVDEGKKKGVSIGIYTSNSQWSPITGGSTAFKSYPLW 189
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: F0ZPJ0_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZPJ0_DICPU) HSP 1 Score: 120 bits (302), Expect = 5.870e-32 Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 4 QIYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKYTYGQIWLDIEGP-QYWGS-QSENVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 +YNA D G+ VDVY+FPCF CGN A Q M++YLKS+N YG +WLDIEGP YW S Q N AF E++S ++ G + IYTSESQWEPI G+ + + PLW Sbjct: 64 SVYNARDAGIEYVDVYLFPCFSCGNGAGQAVSMVNYLKSYNA---------NYGMVWLDIEGPGTYWSSNQGANQAFFNELVSGLESVGAHIGIYTSESQWEPIMGDWSGGAKYPLW 171
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: F4PGX6_CAVFA (Glycoside hydrolase family 25 protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PGX6_CAVFA) HSP 1 Score: 120 bits (300), Expect = 1.270e-31 Identity = 55/117 (47.01%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 4 QIYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKYTYGQIWLDIEGPQ-YWG-SQSENVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 +YNAWDGGM +VD Y+FPCF CGN A Q+ M++Y+KS+N YG +W DIEGP YW +Q++N AF M++ G IYTS SQW PI GN + PLW Sbjct: 65 SMYNAWDGGMADVDAYMFPCFSCGNGAGQVESMVNYIKSYNA---------KYGMVWFDIEGPGVYWSDNQADNQAFFNSMVAGAHAVGAKVGIYTSASQWIPIMGNWAGGASFPLW 172
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: A9VAN2_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAN2_MONBE) HSP 1 Score: 120 bits (301), Expect = 1.440e-31 Identity = 57/117 (48.72%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 7 IYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKY--TYGQIWLDIEGPQYWGSQSE-NVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 IYNAWDGGM++VD+Y+FP R NP SQ+ M+ +LK +++ GGK ++G +WLDIEG QYW S E N F ++S K G+ +YTSESQW PI G+ + S LPLW Sbjct: 63 IYNAWDGGMSHVDIYMFPDPRANNPESQMSSMVEFLKKYSIT---SGGKKPGSFGMVWLDIEGSQYWSSDKETNRKFFDGLVSEGKKHGLKLGVYTSESQWSPIMGDWSGGSSLPLW 176
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: A0A152A2E1_9MYCE (Glycoside hydrolase family 25 protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2E1_9MYCE) HSP 1 Score: 118 bits (296), Expect = 4.580e-31 Identity = 55/117 (47.01%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 4 QIYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKYTYGQIWLDIEGP-QYWGS-QSENVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 +YNAW+GGM +VD+YVFPCF CGN Q+ I Y++S+N +G +W DIEGP YWG QS N AF +M+S + G + IYTS SQW PI G S PLW Sbjct: 63 SVYNAWEGGMADVDIYVFPCFSCGNGYGQVQSAIKYVQSYNA---------KFGMVWFDIEGPGTYWGGDQSSNAAFFADMVSGAQALGAHIGIYTSASQWIPIMGGYTGGSGFPLW 170
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Match: UPI0006448327 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448327) HSP 1 Score: 116 bits (291), Expect = 3.080e-30 Identity = 55/117 (47.01%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 4 QIYNAWDGGMNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKYTYGQIWLDIEGP-QYWG-SQSENVAFIREMISAVKGAGINCAIYTSESQWEPITGNANIASDLPLW 348 IYNA DGG+ +VD Y+FPC CGN A Q+ M++Y+KS+ K T G++W DIEGP YW S ++N AF M+ K AG++ +YTS SQWEPI G+ + LPLW Sbjct: 71 SIYNAKDGGITDVDAYIFPCTSCGNGAGQVVAMVNYIKSY---------KATVGRVWFDIEGPGTYWSNSHADNQAFFNSMLEGAKQAGVSVGVYTSASQWEPIMGSWDGGKALPLW 178 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95172.21958.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95172.21958.1 >prot_M-pyrifera_M_contig95172.21958.1 ID=prot_M-pyrifera_M_contig95172.21958.1|Name=mRNA_M-pyrifera_M_contig95172.21958.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp MNNVDVYVFPCFRCGNPASQIGEMIHYLKSFNVVPNPKGGKYTYGQIWLDback to top mRNA from alignment at M-pyrifera_M_contig95172:24..371+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95172.21958.1 ID=mRNA_M-pyrifera_M_contig95172.21958.1|Name=mRNA_M-pyrifera_M_contig95172.21958.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig95172:24..371+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95172:24..371+ >mRNA_M-pyrifera_M_contig95172.21958.1 ID=mRNA_M-pyrifera_M_contig95172.21958.1|Name=mRNA_M-pyrifera_M_contig95172.21958.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig95172:24..371+ (Macrocystis pyrifera P11B4 male)back to top |