mRNA_M-pyrifera_M_contig94980.21914.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94980.21914.1
Unique NamemRNA_M-pyrifera_M_contig94980.21914.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: A0A6B2L2X8_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2X8_9EUKA)

HSP 1 Score: 147 bits (371), Expect = 4.080e-40
Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 1 
Query:    1 YDHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            YDHNGFMF+ G KLGAF+LFPEHRFYG SLPFGP +SY P+NI  LTIEQA+ DYV II  A   W IP  TP++A GGSYPG+L +++R+A+PD+
Sbjct:   73 YDHNGFMFELGQKLGAFLLFPEHRFYGKSLPFGPVDSYKPENIPKLTIEQAMADYVAIIASAKTQWNIPPTTPLVAYGGSYPGDLTAYMRVAYPDI 168
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: UPI00077A9554 (dipeptidyl peptidase 2-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A9554)

HSP 1 Score: 90.5 bits (223), Expect = 1.480e-19
Identity = 41/96 (42.71%), Postives = 66/96 (68.75%), Query Frame = 1 
Query:    1 YDHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            ++++GF+F+   K  A ++F EHR+YG+SLPFGP ES+    I  LTIEQAL DY +++ E   L+   + + ++A GGSY G L++++R  +P+V
Sbjct:   75 WNNSGFVFEAAEKFNALVIFGEHRYYGESLPFGPDESFQDDKIGYLTIEQALADYAVLLTELKTLFQA-TGSKVVAFGGSYGGMLSAYMRFKYPNV 169
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: A0A7S4NTB1_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NTB1_9EUKA)

HSP 1 Score: 90.1 bits (222), Expect = 5.460e-19
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 1 
Query:    1 YDHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            Y++ GFMF    + GA ++F EHR+YG+SLPFG  +SYT +NI  LT EQA+ DY + I +        S + ++  GGSY G LAS+LR+ +P+V
Sbjct:   98 YNNTGFMFTLASEFGALVVFAEHRYYGESLPFG-NQSYTKENIGYLTSEQAMADYAVFISDYKAQKPELSESKVVVFGGSYGGMLASWLRMRYPNV 192
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: UPI00077AFF5A (dipeptidyl peptidase 2-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AFF5A)

HSP 1 Score: 89.4 bits (220), Expect = 9.770e-19
Identity = 40/96 (41.67%), Postives = 66/96 (68.75%), Query Frame = 1 
Query:    1 YDHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            ++++GF+F+   K  A ++F EHR+YG+SLPFGP +S+    I  LTIEQAL DY +++ E   L+   + + ++A GGSY G L++++R  +P+V
Sbjct:   75 WNNSGFVFEAAEKFNALVIFGEHRYYGESLPFGPDQSFQDDKIGYLTIEQALADYAVLLTELKTLFQA-TGSKVVAFGGSYGGMLSAYMRFKYPNV 169
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: W5MFB0_LEPOC (Prolylcarboxypeptidase n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MFB0_LEPOC)

HSP 1 Score: 89.4 bits (220), Expect = 1.080e-18
Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = 1 
Query:    4 DHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            ++ GFM+    +LGA ++F EHR+YG+SLPFG      P+ +  LT EQAL D+ ++IEE  +       +P+IA+GGSY G LA++LR+ +P V
Sbjct:  109 NNTGFMWDVAEELGAMLVFAEHRYYGESLPFGDQSYSDPKYLNYLTSEQALADFAVLIEELKKTVPGAQQSPVIALGGSYGGMLAAWLRMKYPHV 203
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: A0A8C5C6L0_GADMO (Prolylcarboxypeptidase (angiotensinase C) n=4 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5C6L0_GADMO)

HSP 1 Score: 89.0 bits (219), Expect = 1.410e-18
Identity = 40/95 (42.11%), Postives = 63/95 (66.32%), Query Frame = 1 
Query:    4 DHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            ++ GFM+Q   +LGA ++F EHR+YGDS+PFGP      +++  L+ EQAL D+ ++I E    W    ++ +IA+GGSY G LA++LR+ +P  
Sbjct:   95 NNTGFMWQVAEELGAMLVFAEHRYYGDSMPFGPDSYSDSKHLNYLSSEQALADFAVLIRELKGSWPGARSSAVIAVGGSYGGMLAAWLRMKYPSA 189
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: UPI0003C19EFE (lysosomal Pro-X carboxypeptidase-like n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C19EFE)

HSP 1 Score: 86.3 bits (212), Expect = 2.430e-18
Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = 1 
Query:    4 DHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            ++ GFM+   ++L A ++F EHR+YG+SLPFG +    P+++  LT EQAL D+ ++I    +      N+P+IA+GGSY G LA++ R+ +P V
Sbjct:   61 NNTGFMWDVAVELKAMLVFAEHRYYGESLPFGESSFIDPKHLNYLTSEQALADFAVLIRNLKKTIPGTQNSPVIAIGGSYGGMLAAWFRMKYPHV 155
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: A0A8D0GP68_SPHPU (Prolylcarboxypeptidase n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0GP68_SPHPU)

HSP 1 Score: 87.8 bits (216), Expect = 3.660e-18
Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = 1 
Query:    4 DHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            ++ GFM+    +  A ++F EHR+YG+SLPFG  +SYT +N+  LT EQAL D+ I+I+     +    N P+IA+GGSY G LA++ R+ +P V
Sbjct:  103 NNTGFMWDVAEEFNAMLVFAEHRYYGESLPFG-NKSYTAKNLNYLTSEQALADFAILIQYLKTTFPEAQNAPVIAIGGSYGGMLAAWFRMKYPHV 196
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: UPI001E1D2454 (lysosomal Pro-X carboxypeptidase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2454)

HSP 1 Score: 87.4 bits (215), Expect = 4.930e-18
Identity = 39/95 (41.05%), Postives = 64/95 (67.37%), Query Frame = 1 
Query:    4 DHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            ++ GFM++   +  A ++F EHRFYG+S+P+GP    +P+++  LT EQAL D+ ++I+   Q      N+ ++A GGSY G L+++LRI +PDV
Sbjct:   93 NNTGFMWEIAGEFKALLVFAEHRFYGESIPYGPDAYKSPKHMNYLTSEQALADFAVLIQYLKQTIPGAQNSSVVAFGGSYGGMLSAWLRIKYPDV 187
[Close]
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Match: A0A673ASM0_9TELE (Prolylcarboxypeptidase n=4 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673ASM0_9TELE)

HSP 1 Score: 87.0 bits (214), Expect = 6.600e-18
Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = 1 
Query:    4 DHNGFMFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYVIIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDV 288
            ++ GFM++   +LGA ++F EHR+YG+SLPFG       +++  LT EQAL D+ ++I+    +     N+P+IA+GGSY G LA++ R+ +P V
Sbjct:   81 NNTGFMWEIAEELGAMLVFAEHRYYGESLPFGQESYSDSKHLNYLTSEQALADFAVLIQNMKNMVPGAQNSPVIAVGGSYGGMLAAWFRMKYPSV 175
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94980.21914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B2L2X8_9EUKA4.080e-4065.63Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
UPI00077A95541.480e-1942.71dipeptidyl peptidase 2-like n=1 Tax=Acropora digit... [more]
A0A7S4NTB1_9EUKA5.460e-1945.83Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
UPI00077AFF5A9.770e-1941.67dipeptidyl peptidase 2-like n=2 Tax=Acropora TaxID... [more]
W5MFB0_LEPOC1.080e-1844.21Prolylcarboxypeptidase n=2 Tax=Lepisosteus oculatu... [more]
A0A8C5C6L0_GADMO1.410e-1842.11Prolylcarboxypeptidase (angiotensinase C) n=4 Tax=... [more]
UPI0003C19EFE2.430e-1841.05lysosomal Pro-X carboxypeptidase-like n=1 Tax=Lati... [more]
A0A8D0GP68_SPHPU3.660e-1844.21Prolylcarboxypeptidase n=1 Tax=Sphenodon punctatus... [more]
UPI001E1D24544.930e-1841.05lysosomal Pro-X carboxypeptidase-like n=1 Tax=Merc... [more]
A0A673ASM0_9TELE6.600e-1841.05Prolylcarboxypeptidase n=4 Tax=Sphaeramia orbicula... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94980contigM-pyrifera_M_contig94980:299..598 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score84.7
Seed ortholog evalue2.5e-14
Seed eggNOG ortholog8049.ENSGMOP00000002708
Preferred namePRCP
KEGG koko:K01285
KEGG Pathwayko04614,ko04974,map04614,map04974
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001525,GO:0001568,GO:0001775,GO:0001944,GO:0002155,GO:0002252,GO:0002254,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002353,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002526,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003674,GO:0003824,GO:0004177,GO:0004180,GO:0004185,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005773,GO:0005774,GO:0005886,GO:0006508,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007275,GO:0007596,GO:0007597,GO:0007599,GO:0008015,GO:0008150,GO:0008152,GO:0008217,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009611,GO:0009653,GO:0009966,GO:0009987,GO:0010594,GO:0010632,GO:0010646,GO:0012505,GO:0012506,GO:0016020,GO:0016192,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0023051,GO:0030141,GO:0030334,GO:0030659,GO:0030667,GO:0031090,GO:0031323,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032879,GO:0032940,GO:0033500,GO:0035239,GO:0035295,GO:0035577,GO:0036230,GO:0040012,GO:0042060,GO:0042119,GO:0042582,GO:0042592,GO:0042593,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043535,GO:0044238,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045178,GO:0045321,GO:0045776,GO:0046903,GO:0048514,GO:0048583,GO:0048646,GO:0048731,GO:0048856,GO:0048871,GO:0048878,GO:0050789,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051270,GO:0060055,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070820,GO:0071704,GO:0071944,GO:0072358,GO:0072359,GO:0072376,GO:0072378,GO:0097009,GO:0097708,GO:0098588,GO:0098805,GO:0098852,GO:0099503,GO:0101002,GO:0101003,GO:0140096,GO:1901564,GO:2000145,GO:2000377
EggNOG free text desc.Prolylcarboxypeptidase (angiotensinase C)
EggNOG OGs38H4Q@33154,3BCW8@33208,3CSRE@33213,488ZE@7711,492EI@7742,49V4C@7898,KOG2183@1,KOG2183@2759
EC3.4.16.2
COG Functional cat.O
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons1
Model size300
Cds size282
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816863.9359465-CDS-M-pyrifera_M_contig94980:298..5801622816863.9359465-CDS-M-pyrifera_M_contig94980:298..580Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94980 299..580 -
1692278223.1755536-CDS-M-pyrifera_M_contig94980:298..5801692278223.1755536-CDS-M-pyrifera_M_contig94980:298..580Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94980 299..580 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816863.9481254-UTR-M-pyrifera_M_contig94980:580..5981622816863.9481254-UTR-M-pyrifera_M_contig94980:580..598Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig94980 581..598 -
1692278223.1911242-UTR-M-pyrifera_M_contig94980:580..5981692278223.1911242-UTR-M-pyrifera_M_contig94980:580..598Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig94980 581..598 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94980.21914.1prot_M-pyrifera_M_contig94980.21914.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94980 299..580 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94980.21914.1

>prot_M-pyrifera_M_contig94980.21914.1 ID=prot_M-pyrifera_M_contig94980.21914.1|Name=mRNA_M-pyrifera_M_contig94980.21914.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp
MFQFGMKLGAFMLFPEHRFYGDSLPFGPTESYTPQNIQGLTIEQALQDYV
IIIEEAMQLWGIPSNTPIIAMGGSYPGELASFLRIAFPDVSNS*
back to top

mRNA from alignment at M-pyrifera_M_contig94980:299..598-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94980.21914.1 ID=mRNA_M-pyrifera_M_contig94980.21914.1|Name=mRNA_M-pyrifera_M_contig94980.21914.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig94980:299..598- (Macrocystis pyrifera P11B4 male)
TACGACCACAACGGCTTCATGTTTCAGTTTGGCATGAAGCTCGGCGCATT
CATGCTCTTCCCGGAGCACCGCTTCTACGGCGATTCGCTGCCGTTCGGCC
CGACCGAGTCTTACACTCCCCAGAACATCCAGGGCCTCACCATCGAGCAG
GCGCTGCAGGACTACGTCATCATCATCGAGGAGGCAATGCAGCTCTGGGG
CATCCCTTCCAACACGCCCATCATTGCCATGGGTGGCAGTTACCCCGGCG
AGCTGGCCTCCTTCCTCCGCATTGCCTTCCCCGACGTAAGCAATTCGTAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig94980:299..598-

>mRNA_M-pyrifera_M_contig94980.21914.1 ID=mRNA_M-pyrifera_M_contig94980.21914.1|Name=mRNA_M-pyrifera_M_contig94980.21914.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig94980:299..598- (Macrocystis pyrifera P11B4 male)
ATGTTTCAGTTTGGCATGAAGCTCGGCGCATTCATGCTCTTCCCGGAGCA
CCGCTTCTACGGCGATTCGCTGCCGTTCGGCCCGACCGAGTCTTACACTC
CCCAGAACATCCAGGGCCTCACCATCGAGCAGGCGCTGCAGGACTACGTC
ATCATCATCGAGGAGGCAATGCAGCTCTGGGGCATCCCTTCCAACACGCC
CATCATTGCCATGGGTGGCAGTTACCCCGGCGAGCTGGCCTCCTTCCTCC
GCATTGCCTTCCCCGACGTAAGCAATTCGTAAATGTTTCAGTTTGGCATG
AAGCTCGGCGCATTCATGCTCTTCCCGGAGCACCGCTTCTACGGCGATTC
GCTGCCGTTCGGCCCGACCGAGTCTTACACTCCCCAGAACATCCAGGGCC
TCACCATCGAGCAGGCGCTGCAGGACTACGTCATCATCATCGAGGAGGCA
ATGCAGCTCTGGGGCATCCCTTCCAACACGCCCATCATTGCCATGGGTGG
CAGTTACCCCGGCGAGCTGGCCTCCTTCCTCCGCATTGCCTTCCCCGACG
TAAGCAATTCGTAA
back to top