mRNA_M-pyrifera_M_contig94884.21884.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94884.21884.1
Unique NamemRNA_M-pyrifera_M_contig94884.21884.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A3D1GD45_9BACT (Electron transporter RnfD n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GD45_9BACT)

HSP 1 Score: 353 bits (907), Expect = 1.990e-119
Identity = 162/245 (66.12%), Postives = 192/245 (78.37%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSGDRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            GT +SA M DETGDNYY+I++DGE    LRP T  + Y L   L D  H VEIFKRTEY+RGL+WF+GFELP GA +L +  PK ++IEY+GDSITAGYSV DY GD  DSIYT+Y LSYGNL+A++FDAEQ C CKSGIGITVSWFDYEMPD+W+LTNP D  S WDF+ Y PDLV+VNLFQNDSW+V  P  +SFK NFG   PT  +IV AYA+F+SG+R++YP   I+ TLGNMDITREGS
Sbjct:   65 GTMVSAIMKDETGDNYYDIMVDGETIKLLRPDTTLKTYVLVEGLTDEPHQVEIFKRTEYNRGLSWFFGFELPVGANILPKSQPKKHRIEYYGDSITAGYSVTDYKGDSPDSIYTNYALSYGNLIAEYFDAEQHCICKSGIGITVSWFDYEMPDIWNLTNPSDENSTWDFTAYTPDLVIVNLFQNDSWLVNRPDMESFKDNFGDIPPTEVQIVNAYAEFISGIRSKYPGTPIVCTLGNMDITREGS 309          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A8J3BEC0_9FLAO (Endoglucanase n=1 Tax=Yeosuana aromativorans TaxID=288019 RepID=A0A8J3BEC0_9FLAO)

HSP 1 Score: 302 bits (774), Expect = 3.230e-99
Identity = 141/246 (57.32%), Postives = 183/246 (74.39%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            G  I A + DETG+NYYN+IID +    LRP T    Y+LAS L +  H+VEIFKRTE+DRG   FYGFE+  GA++L + APK  +IE++G+SITAGY+V DYSG D  DS YT+ YLSY  + A+H+DA+ QC CKSGIGIT+SWF   MPD++D  NP DSTS WDFS Y+PD+VV+NL QNDSW+V MP+++ FK+NFG + P+++  + AY  FV+ +R QYP  +II  LGNMDIT+EGS
Sbjct:   67 GQSIKALLKDETGNNYYNVIIDNDSAVLLRPDTTKTYYQLASRLPEGNHSVEIFKRTEWDRGTTTFYGFEIQKGAKLLPKPAPKKRQIEFYGNSITAGYAVEDYSGGDSPDSTYTNNYLSYSAITARHYDAKYQCICKSGIGITISWFPLIMPDIYDRLNPADSTSTWDFSLYKPDIVVINLLQNDSWLVNMPEREEFKKNFGGQLPSDDYFINAYQQFVANIRKQYPEANIICMLGNMDITKEGS 312          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A3M9N3T2_9BACT (Electron transporter RnfD n=1 Tax=Rufibacter immobilis TaxID=1348778 RepID=A0A3M9N3T2_9BACT)

HSP 1 Score: 295 bits (754), Expect = 3.240e-96
Identity = 135/246 (54.88%), Postives = 184/246 (74.80%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            GTG+ A++ D+TG++YYN+I+DG+    +RP T A+L+ L S+L+  +HTVE+FKRTE+D+G   FYGFELP GA+VL   A     IE++G+SITAGY+V+DYSG D  + + TD Y+SY  L A++F+A+  C CKSGIGITVSW    MP+++D  NP D++S WDF+  QPD+VV+NLFQNDSW+V  P+ + FKR FGT+ PT +++V AY +FV G+R +YP   IIA LGNMDITR GS
Sbjct:   65 GTGVQARLKDDTGNSYYNVILDGDTVSVIRPDTAAKLFTLGSQLKPGKHTVELFKRTEWDKGTTTFYGFELPQGAKVLPASAKPKRSIEFYGNSITAGYAVHDYSGKDSWEGLNTDNYVSYAALTARYFNADYTCVCKSGIGITVSWGPIIMPEIYDRLNPSDASSRWDFTQKQPDVVVINLFQNDSWLVNRPEHEQFKRRFGTEKPTEQDLVTAYQNFVKGIRAKYPQAHIIAALGNMDITRAGS 310          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A356H4T9_9BACT (Electron transporter RnfD n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A356H4T9_9BACT)

HSP 1 Score: 292 bits (747), Expect = 3.600e-95
Identity = 141/246 (57.32%), Postives = 178/246 (72.36%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            G  I A + DE GDNYYNIIID +    LRP T  RLY LA+ L +  H +EIFKRTE+DRG   FYGF++    E+L+R+AP+  KIE++G+SITAGY+V D+SG DRSDSI+T+ YLSY  + A+HF+AE  C CKSGIGI +SWF   MP++++   P DSTS WDF+ Y PD+VVVNLFQNDSW+V MP  ++FK  FGTK P  + IV++YA FVS +R +YP   II  LG MD TREGS
Sbjct:   64 GEVIGALLEDERGDNYYNIIIDNDSLFVLRPDTTKRLYPLATGLSNGNHKIEIFKRTEWDRGKTTFYGFQIKGNPELLNREAPRKRKIEFYGNSITAGYAVEDFSGKDRSDSIFTNNYLSYAAITARHFNAEYNCICKSGIGILISWFPLTMPEIYNRLIPEDSTSRWDFTLYTPDVVVVNLFQNDSWLVNMPDYETFKTQFGTKAPDEDVIVKSYAGFVSAIRKEYPNAQIICALGTMDATREGS 309          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: UPI0014313EE4 (GDSL-type esterase/lipase family protein n=2 Tax=Maribellus sediminis TaxID=2696285 RepID=UPI0014313EE4)

HSP 1 Score: 288 bits (737), Expect = 1.140e-93
Identity = 136/246 (55.28%), Postives = 176/246 (71.54%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            G+ +SA  ++E GDNYYN+I+D +      P T    Y LA  L +  H +EIFKRTE+DRG + FYGF++   A+VL +   K  KIE++G+SITAGY+V+D+SG DRSDSI+T+ YLSY  L A HFDAE +C CKSGIGIT+SWF   MP++++  +P D  S WDFS Y PDLVV+NLFQNDSW+V  P+ + FKR FGT+ PT+E I++ YADFV  +R +YP   II  LGNMD TREGS
Sbjct:   63 GSAVSAMFDEERGDNYYNVIVDNDSLFVFHPDTVQHYYTLAEGLSEGPHQIEIFKRTEWDRGWSRFYGFKIEGAAKVLPKPPAKKRKIEFYGNSITAGYAVDDFSGRDRSDSIFTNNYLSYAKLTADHFDAEYRCICKSGIGITISWFPLMMPELYNRLDPADPESRWDFSQYSPDLVVINLFQNDSWLVENPRHEEFKRQFGTEKPTDEFIIEKYADFVRSIRKEYPTTPIICMLGNMDATREGS 308          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A419W8Z0_9BACT (GDSL-like lipase/acylhydrolase family protein n=1 Tax=Mangrovibacterium diazotrophicum TaxID=1261403 RepID=A0A419W8Z0_9BACT)

HSP 1 Score: 287 bits (735), Expect = 2.350e-93
Identity = 136/246 (55.28%), Postives = 178/246 (72.36%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            G  ISA   +E GDNYYN+ +D +    LRP    + Y+LAS+L   +HTVEIFKRTE+DRG++ F+GF++   A+VL +  PK  KIE++G+SITAGY+V+D+SG DRSDSI+T+ Y SY  + A HFDAE +C CKSGIGIT+SWF   MP++++  NP D  S WDFS Y PD+VV+NLFQNDSW+V +P  + FK  FGT+ PT E I+ AYADFV  +R +YP   I+  LG+MD TREGS
Sbjct:   64 GESISALFREERGDNYYNVFVDNDSAFMLRPDATKQYYELASKLAPGKHTVEIFKRTEWDRGVSTFFGFKISGDAKVLAKPEPKKRKIEFYGNSITAGYAVDDFSGEDRSDSIFTNNYESYARITADHFDAEYRCICKSGIGITISWFPLIMPEMYNRLNPNDPDSRWDFSLYTPDVVVINLFQNDSWLVNLPNHEQFKARFGTEKPTPEFIINAYADFVRSIRAEYPDAQIVCILGSMDATREGS 309          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A419X983_9BACT (GDSL-like lipase/acylhydrolase family protein n=2 Tax=Marinifilum TaxID=866673 RepID=A0A419X983_9BACT)

HSP 1 Score: 286 bits (733), Expect = 4.440e-93
Identity = 138/247 (55.87%), Postives = 180/247 (72.87%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDR-DAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            G  +SA M DE  DNYYNIIID +     RP T    ++LA+ L   +H++E+FKRTE+DRG   FYGF++   A++L + D PK  KIE++G+SITAGY+V D SG D  DS +T+ YLSY ++ A+HFDA+  C CKSGIGIT+SWF +EMPD++D  NP DS S WDFS Y PD+VVVNLFQNDSW+V MP++D FK+NFG K+P+ E ++ AY  FV+G+R  YP  +II  LGNMD T+EGS
Sbjct:   62 GESLSALMKDEKADNYYNIIIDKDSIVLFRPDTIKEYHELATNLSPGKHSIELFKRTEWDRGATNFYGFKIGGKAKLLAKADVPKR-KIEFYGNSITAGYAVEDTSGKDSPDSTFTNNYLSYASITARHFDADYHCICKSGIGITISWFPFEMPDIYDRLNPADSISKWDFSLYAPDVVVVNLFQNDSWLVNMPERDEFKKNFGEKSPSEEYLIHAYQQFVAGIRNHYPKAEIICMLGNMDATKEGS 307          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A1M6L095_9BACT (GDSL-like Lipase/Acylhydrolase family protein n=3 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6L095_9BACT)

HSP 1 Score: 286 bits (732), Expect = 6.490e-93
Identity = 138/246 (56.10%), Postives = 178/246 (72.36%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            G  ISA M DE GDNYYN+IID +    LRP T  + Y+LAS L   +H+VE+FKRTE+DRG   FYG ++   A+VL +   +  KIE++G+SITAGY+V+D+SG DRSDSI+T++YLSY  + A+H+DAE+   CKSGIGIT+SWF   MP+++D  NP D +S WDFS Y PDLVV+NL QNDSW+V MP+++ FK NFG   PT+E + QAY  FVS +R  YP   II  LGNMD T+EGS
Sbjct:   63 GESISALMQDERGDNYYNVIIDEDSMYVLRPDTTKKYYQLASGLSGGKHSVELFKRTEWDRGKTIFYGLKIEGDAKVLPKSREEKKKIEFYGNSITAGYAVDDFSGKDRSDSIFTNHYLSYAAITARHYDAERHTICKSGIGITISWFPMIMPEIYDRINPEDPSSSWDFSLYTPDLVVINLLQNDSWLVNMPEREEFKTNFGDTAPTDEYLTQAYQGFVSQIRGHYPSASIICMLGNMDATQEGS 308          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A2T5C111_9BACT (GDSL-like lipase/acylhydrolase family protein n=1 Tax=Mangrovibacterium marinum TaxID=1639118 RepID=A0A2T5C111_9BACT)

HSP 1 Score: 286 bits (732), Expect = 6.700e-93
Identity = 137/246 (55.69%), Postives = 176/246 (71.54%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            G  I+A + D+ GDNYYN+ +DG+    LRP T  R Y LAS+L   +H +EIFKRTE+DRG   FYGF +   A++L RD  K  KIE++G+SITAGY+V+D+SG DRSDSI+T+ Y SY  L A H++A+  C CKSGIGITVSWF   MP+++D  +P D  S WDFS Y PD+VV+NLFQNDSW+V MPQ + FK  FG++ PT E I  AYA+FV  +RT+YP   I+  LG+MD TREGS
Sbjct:   64 GEAIAATLADQRGDNYYNVFVDGDSLTILRPDTTQREYLLASDLGAGKHRLEIFKRTEWDRGTTSFYGFRISGKAKLLQRDPAKKRKIEFYGNSITAGYAVDDFSGKDRSDSIFTNNYRSYARLTADHYNAQYSCICKSGIGITVSWFPTIMPEIYDRLDPTDPNSPWDFSRYTPDVVVINLFQNDSWLVNMPQHEQFKARFGSQAPTPEFITGAYANFVRSIRTRYPEAQIVCMLGSMDATREGS 309          
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Match: A0A0P0D0S7_9BACT (Electron transporter RnfD n=1 Tax=Rufibacter tibetensis TaxID=512763 RepID=A0A0P0D0S7_9BACT)

HSP 1 Score: 286 bits (732), Expect = 7.130e-93
Identity = 139/246 (56.50%), Postives = 174/246 (70.73%), Query Frame = 1
Query:    1 GTGISAKMNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRTEYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSG-DRSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDLTNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPTNEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS 735
            GT + A++ D TG +YYN+IIDG+    L+P TEA+LY LAS L+  +HTVE+FKRTE+D+G   FYGFEL  G + L   APKT KIE++G+SITAGY+  DYSG D      T+ Y+SY  L  + FDA+  C CKSGIGITVSW    MP++++  NP DSTS WDFS  QPD+VV+NLFQNDSWIV  PQ   FKR FGT  P+ E ++ AY +FV  +R++YP   IIA LGNMDITR GS
Sbjct:   66 GTSVKARLKDSTGKSYYNVIIDGDSISILQPDTEAKLYTLASGLKPGKHTVELFKRTEWDKGTTTFYGFELENGGKTLPAAAPKTRKIEFYGNSITAGYAAEDYSGKDNPAGTNTNNYVSYAALTTRFFDADYTCICKSGIGITVSWEPLIMPEIYNRLNPSDSTSKWDFSQKQPDIVVINLFQNDSWIVEQPQNAQFKRRFGTTKPSEEFLITAYQNFVKNIRSKYPNAHIIAMLGNMDITRAGS 311          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94884.21884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D1GD45_9BACT1.990e-11966.12Electron transporter RnfD n=1 Tax=Balneolaceae bac... [more]
A0A8J3BEC0_9FLAO3.230e-9957.32Endoglucanase n=1 Tax=Yeosuana aromativorans TaxID... [more]
A0A3M9N3T2_9BACT3.240e-9654.88Electron transporter RnfD n=1 Tax=Rufibacter immob... [more]
A0A356H4T9_9BACT3.600e-9557.32Electron transporter RnfD n=2 Tax=Bacteroidetes Ta... [more]
UPI0014313EE41.140e-9355.28GDSL-type esterase/lipase family protein n=2 Tax=M... [more]
A0A419W8Z0_9BACT2.350e-9355.28GDSL-like lipase/acylhydrolase family protein n=1 ... [more]
A0A419X983_9BACT4.440e-9355.87GDSL-like lipase/acylhydrolase family protein n=2 ... [more]
A0A1M6L095_9BACT6.490e-9356.10GDSL-like Lipase/Acylhydrolase family protein n=3 ... [more]
A0A2T5C111_9BACT6.700e-9355.69GDSL-like lipase/acylhydrolase family protein n=1 ... [more]
A0A0P0D0S7_9BACT7.130e-9356.50Electron transporter RnfD n=1 Tax=Rufibacter tibet... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94884contigM-pyrifera_M_contig94884:2..736 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score267.7
Seed ortholog evalue5.2e-69
Seed eggNOG ortholog391603.FBALC1_16787
Preferred namecelE
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GDSL-like Lipase/Acylhydrolase family
EggNOG OGs1HZ3W@117743,4NFVN@976,COG2755@1,COG2755@2
COG Functional cat.E
Best tax levelFlavobacteriia
Best eggNOG OGNA|NA|NA
Exons1
Model size735
Cds size714
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816862.4154398-UTR-M-pyrifera_M_contig94884:1..221622816862.4154398-UTR-M-pyrifera_M_contig94884:1..22Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig94884 2..22 +
1692278222.335958-UTR-M-pyrifera_M_contig94884:1..221692278222.335958-UTR-M-pyrifera_M_contig94884:1..22Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig94884 2..22 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816862.4260957-CDS-M-pyrifera_M_contig94884:22..7361622816862.4260957-CDS-M-pyrifera_M_contig94884:22..736Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94884 23..736 +
1692278222.3581073-CDS-M-pyrifera_M_contig94884:22..7361692278222.3581073-CDS-M-pyrifera_M_contig94884:22..736Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94884 23..736 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94884.21884.1prot_M-pyrifera_M_contig94884.21884.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94884 23..736 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94884.21884.1

>prot_M-pyrifera_M_contig94884.21884.1 ID=prot_M-pyrifera_M_contig94884.21884.1|Name=mRNA_M-pyrifera_M_contig94884.21884.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
MNDETGDNYYNIIIDGEITDTLRPGTEARLYKLASELEDTEHTVEIFKRT
EYDRGLAWFYGFELPAGAEVLDRDAPKTYKIEYFGDSITAGYSVNDYSGD
RSDSIYTDYYLSYGNLVAQHFDAEQQCTCKSGIGITVSWFDYEMPDVWDL
TNPMDSTSVWDFSDYQPDLVVVNLFQNDSWIVTMPQQDSFKRNFGTKTPT
NEEIVQAYADFVSGVRTQYPYVDIIATLGNMDITREGS
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mRNA from alignment at M-pyrifera_M_contig94884:2..736+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94884.21884.1 ID=mRNA_M-pyrifera_M_contig94884.21884.1|Name=mRNA_M-pyrifera_M_contig94884.21884.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=735bp|location=Sequence derived from alignment at M-pyrifera_M_contig94884:2..736+ (Macrocystis pyrifera P11B4 male)
GGGACCGGAATAAGTGCTAAAATGAATGATGAAACCGGGGATAATTATTA CAACATCATCATTGATGGAGAAATCACAGATACTTTGCGTCCGGGCACAG AAGCGAGATTGTACAAGTTGGCTTCAGAGCTTGAAGACACGGAGCATACG GTAGAAATCTTCAAAAGAACCGAATACGATCGGGGTCTTGCCTGGTTCTA TGGATTTGAACTGCCTGCCGGGGCGGAAGTTTTAGATAGAGATGCTCCTA AAACCTATAAAATCGAATATTTTGGAGATTCCATTACCGCAGGCTATTCT GTAAATGATTACTCAGGAGATCGATCGGATAGTATTTACACCGATTACTA TTTGTCTTATGGTAATCTGGTTGCGCAGCATTTTGATGCCGAACAGCAAT GTACCTGTAAAAGCGGCATCGGAATAACCGTGAGCTGGTTTGATTATGAA ATGCCCGATGTTTGGGATTTAACGAACCCTATGGATTCGACCAGCGTATG GGATTTTTCTGATTATCAACCTGATTTGGTAGTGGTTAATCTTTTTCAGA ATGATTCATGGATAGTTACAATGCCGCAACAGGACAGTTTTAAGCGGAAT TTTGGAACCAAAACTCCAACAAACGAAGAAATTGTTCAAGCCTATGCCGA CTTTGTAAGTGGAGTTCGAACACAATACCCGTATGTGGATATCATTGCTA CCTTAGGGAATATGGATATCACTCGAGAAGGGTCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig94884:2..736+

>mRNA_M-pyrifera_M_contig94884.21884.1 ID=mRNA_M-pyrifera_M_contig94884.21884.1|Name=mRNA_M-pyrifera_M_contig94884.21884.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig94884:2..736+ (Macrocystis pyrifera P11B4 male)
ATGAATGATGAAACCGGGGATAATTATTACAACATCATCATTGATGGAGA
AATCACAGATACTTTGCGTCCGGGCACAGAAGCGAGATTGTACAAGTTGG
CTTCAGAGCTTGAAGACACGGAGCATACGGTAGAAATCTTCAAAAGAACC
GAATACGATCGGGGTCTTGCCTGGTTCTATGGATTTGAACTGCCTGCCGG
GGCGGAAGTTTTAGATAGAGATGCTCCTAAAACCTATAAAATCGAATATT
TTGGAGATTCCATTACCGCAGGCTATTCTGTAAATGATTACTCAGGAGAT
CGATCGGATAGTATTTACACCGATTACTATTTGTCTTATGGTAATCTGGT
TGCGCAGCATTTTGATGCCGAACAGCAATGTACCTGTAAAAGCGGCATCG
GAATAACCGTGAGCTGGTTTGATTATGAAATGCCCGATGTTTGGGATTTA
ACGAACCCTATGGATTCGACCAGCGTATGGGATTTTTCTGATTATCAACC
TGATTTGGTAGTGGTTAATCTTTTTCAGAATGATTCATGGATAGTTACAA
TGCCGCAACAGGACAGTTTTAAGCGGAATTTTGGAACCAAAACTCCAACA
AACGAAGAAATTGTTCAAGCCTATGCCGACTTTGTAAGTGGAGTTCGAAC
ACAATACCCGTATGTGGATATCATTGCTACCTTAGGGAATATGGATATCA
CTCGAGAAGGGTCTATGAATGATGAAACCGGGGATAATTATTACAACATC
ATCATTGATGGAGAAATCACAGATACTTTGCGTCCGGGCACAGAAGCGAG
ATTGTACAAGTTGGCTTCAGAGCTTGAAGACACGGAGCATACGGTAGAAA
TCTTCAAAAGAACCGAATACGATCGGGGTCTTGCCTGGTTCTATGGATTT
GAACTGCCTGCCGGGGCGGAAGTTTTAGATAGAGATGCTCCTAAAACCTA
TAAAATCGAATATTTTGGAGATTCCATTACCGCAGGCTATTCTGTAAATG
ATTACTCAGGAGATCGATCGGATAGTATTTACACCGATTACTATTTGTCT
TATGGTAATCTGGTTGCGCAGCATTTTGATGCCGAACAGCAATGTACCTG
TAAAAGCGGCATCGGAATAACCGTGAGCTGGTTTGATTATGAAATGCCCG
ATGTTTGGGATTTAACGAACCCTATGGATTCGACCAGCGTATGGGATTTT
TCTGATTATCAACCTGATTTGGTAGTGGTTAATCTTTTTCAGAATGATTC
ATGGATAGTTACAATGCCGCAACAGGACAGTTTTAAGCGGAATTTTGGAA
CCAAAACTCCAACAAACGAAGAAATTGTTCAAGCCTATGCCGACTTTGTA
AGTGGAGTTCGAACACAATACCCGTATGTGGATATCATTGCTACCTTAGG
GAATATGGATATCACTCGAGAAGGGTCT
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