mRNA_M-pyrifera_M_contig94844.21881.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94844.21881.1
Unique NamemRNA_M-pyrifera_M_contig94844.21881.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A517PR69_9PLAN (Aminopeptidase YwaD n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PR69_9PLAN)

HSP 1 Score: 491 bits (1263), Expect = 8.190e-169
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1
Query:    1 NTGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            NTGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA
Sbjct:  115 NTGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 359          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A517Q9H9_9PLAN (Aminopeptidase YwaD n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q9H9_9PLAN)

HSP 1 Score: 442 bits (1137), Expect = 8.870e-150
Identity = 219/245 (89.39%), Postives = 230/245 (93.88%), Query Frame = 1
Query:    1 NTGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            NTGSKLGP NELQL GPDGKTIPL YDKDFRSCSFGGSGKFDAE+VFCGYGIDA+DAKYNDYANVDVKDKVVIIMRRTPQQG+K+SPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQE+KKEA++LEQDAIEELI ATE WEKA+ DK + + V+LKKAL DVQQARK LKEA FDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDE  KPESF LPQWKA
Sbjct:  115 NTGSKLGPANELQLAGPDGKTIPLVYDKDFRSCSFGGSGKFDAELVFCGYGIDAKDAKYNDYANVDVKDKVVIIMRRTPQQGEKDSPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQENKKEAKDLEQDAIEELITATENWEKASADKRDNADVNLKKALLDVQQARKKLKEARFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDEQLKPESFELPQWKA 359          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A518IEW4_9PLAN (Aminopeptidase YwaD n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IEW4_9PLAN)

HSP 1 Score: 419 bits (1077), Expect = 9.880e-141
Identity = 207/245 (84.49%), Postives = 221/245 (90.20%), Query Frame = 1
Query:    1 NTGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            NTGSKLGPTNELQLTGPDGKTIPL YDKDFRSCSFGGSGKFDAE+VFCGYGIDA+D KY+DYA VDVKDKVVIIMRRTPQQGDK SPFAGAHGISRYAALRYKVSTAFGKGAKAILFVND+YSTQE+KKEA+ELE+DA+EELI ATE WEKA   K+  +   LKKALH VQQ RK LKE  FD LM+FGYAGSGDGRSIPIAHI+IEKCNELFKDAGKPTLQELE +ID   KPESFALP+WKA
Sbjct:  115 NTGSKLGPTNELQLTGPDGKTIPLVYDKDFRSCSFGGSGKFDAEVVFCGYGIDAKDVKYSDYAGVDVKDKVVIIMRRTPQQGDKTSPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDHYSTQENKKEAKELEEDAVEELITATENWEKAKDGKQAEADRELKKALHSVQQTRKRLKEGKFDELMKFGYAGSGDGRSIPIAHISIEKCNELFKDAGKPTLQELESQIDADLKPESFALPKWKA 359          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A517VV83_9PLAN (Aminopeptidase YwaD n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VV83_9PLAN)

HSP 1 Score: 404 bits (1037), Expect = 1.040e-134
Identity = 200/245 (81.63%), Postives = 217/245 (88.57%), Query Frame = 1
Query:    1 NTGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            NTGSKLG  N+L L GPDGKTIPL YDKDFRSCSFGGSGKFDAE+VFCGYGIDA+D KY+DYA +DVKDKV II+RRTPQQGDK+SPFAGAHGISRYAALRYKVSTAFGKGAKAILFVND YST+E+KKEA+ELE+DAIEELI ATE WE++ KDK   +   LKKALH+VQQARK LK   FD LM+FGYAGSGDGRSIPIAHITIE CN+LFKDAGKPTLQELE KID   KPESFALPQWKA
Sbjct:  115 NTGSKLGTLNQLALVGPDGKTIPLKYDKDFRSCSFGGSGKFDAELVFCGYGIDAKDVKYSDYAGIDVKDKVAIILRRTPQQGDKKSPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDSYSTEENKKEAQELEEDAIEELITATENWEQSNKDKRMEADRELKKALHEVQQARKRLKNGAFDVLMKFGYAGSGDGRSIPIAHITIETCNQLFKDAGKPTLQELEAKIDANLKPESFALPQWKA 359          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A350KBR3_9PLAN (Aminopeptidase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KBR3_9PLAN)

HSP 1 Score: 384 bits (987), Expect = 9.800e-133
Identity = 187/236 (79.24%), Postives = 212/236 (89.83%), Query Frame = 1
Query:   28 NELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            N+L+LTGPDGKTIPL YD+DFR+CSFGGSGKFDAE+VFCGYGIDA D KYNDYA+VDVKDKVVIIMRRTPQQGDK+SPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYST+E+KKEA+ELEQDA+EELI AT+ W KA ++K+E +   LKKALHD+QQAR+ LK+A FD+LMEFGYAGSGDGRSIPIAHI+I+ CN+LFK AGKP L+ELE  ID+  K ESF L  WKA
Sbjct:    2 NQLELTGPDGKTIPLKYDQDFRACSFGGSGKFDAELVFCGYGIDADDLKYNDYADVDVKDKVVIIMRRTPQQGDKKSPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTEENKKEAKELEQDAVEELITATDNWSKANENKQEEAERELKKALHDIQQARQVLKDAKFDKLMEFGYAGSGDGRSIPIAHISIDACNQLFKAAGKPLLKELEKNIDQDLKTESFVLTDWKA 237          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A517XE61_9PLAN (Aminopeptidase YwaD n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XE61_9PLAN)

HSP 1 Score: 397 bits (1020), Expect = 3.980e-132
Identity = 194/245 (79.18%), Postives = 217/245 (88.57%), Query Frame = 1
Query:    1 NTGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            NTGSKLGP N+L+LTGPDGKTI L YD DFR+CSFGGSGKFDAE+VFCGYGIDA D KYNDYA+VDVKDKVVIIMRRTPQQGDK+SPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYST+E+KKEA+ELEQDA+EELI AT+ W KA + K+E +   LKKALHD+QQ R+ LK+A FD+LMEFGYAGSGDGRSIPIAHI+I+ CN+LFK AGKP L+ELE  ID+  KPESF L  WKA
Sbjct:  117 NTGSKLGPVNQLELTGPDGKTISLKYDHDFRACSFGGSGKFDAELVFCGYGIDADDLKYNDYADVDVKDKVVIIMRRTPQQGDKKSPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTEENKKEAKELEQDAVEELITATDNWSKANEKKQEEAERELKKALHDIQQTRQVLKDAKFDKLMEFGYAGSGDGRSIPIAHISIDACNQLFKAAGKPLLKELEKNIDQDLKPESFVLTDWKA 361          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: UPI00141F0CE9 (M20/M25/M40 family metallo-hydrolase n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00141F0CE9)

HSP 1 Score: 211 bits (538), Expect = 9.110e-61
Identity = 122/249 (49.00%), Postives = 157/249 (63.05%), Query Frame = 1
Query:    4 TGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHG-ISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQ----ARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            TGSKLG  N+L LTGP+ KTI L  D+DF  CSFGGSGKFD  +VFCGYGI+ +  KYND+  V++KD + IIMRR PQQG K SPFAG HG +SR+AAL  K+S A+ +GA A+LFVND YS        ++  Q A  +     +K  + + D +E +A  LK+   D Q+     R+ + +   D LMEFGY G G  +SIP+AHIT E  N +   +   TL ELE +IDE  KP+S  L  WKA
Sbjct:   93 TGSKLGQPNKLTLTGPNDKTIELKLDEDFEVCSFGGSGKFDKPLVFCGYGIEHE--KYNDFDGVELKDAIAIIMRRNPQQGKKGSPFAGVHGGVSRHAALSTKLSNAYQRGAAAVLFVNDPYSRASELSNLKDQLQKARAKRKELAQKIAEVSPD-DEDAAKKLKQQQVDTQKQIRAVRQQIDKFDPDPLMEFGYGGDGKDKSIPVAHITQEVANRVLSASLGKTLSELETQIDEDLKPQSAILKGWKA 338          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A4P5XS01_9BACT (Aminopeptidase n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A4P5XS01_9BACT)

HSP 1 Score: 211 bits (538), Expect = 1.020e-60
Identity = 120/250 (48.00%), Postives = 157/250 (62.80%), Query Frame = 1
Query:    4 TGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHG-ISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVS-----LKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            TG+KLGPTN L+L GP+GKTI LA DKDF+ CSFG SG F+AE+VF GY IDA+D KY D   +D+K KVVI++R+TP+QGD   PFA  HG  SR+A LR K+S AFGKGA AILFVND  S ++  ++A++  +DA E ++ A       A D     AV      L +A+  VQQ R    +   D LM+FGYAG       PI H+T    +++ + + K TL  LE +ID+  KP +  L  WKA
Sbjct:   95 TGAKLGPTNTLKLVGPEGKTIELAIDKDFQVCSFGASGTFNAELVFGGYAIDAKDDKYQDLEGIDIKGKVVIVIRKTPRQGDAHGPFAAGHGGQSRHADLRAKISNAFGKGAAAILFVNDVASGKKEIEQAKQRAKDAAEPVVDAAAVL--LAADANNAEAVKAAREKLDEAVKKVQQQRDAATKVETDVLMKFGYAGFNQNAGGPIFHVTQATLDQVLQASLKKTLAALEAEIDQDLKPRTAVLSGWKA 342          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A517QLP9_9PLAN (Aminopeptidase YwaD n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QLP9_9PLAN)

HSP 1 Score: 209 bits (532), Expect = 6.860e-60
Identity = 114/242 (47.11%), Postives = 149/242 (61.57%), Query Frame = 1
Query:    7 GSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWK 732
            G+KLG  N L LTGPDGKTI L   K+F  CSFGGSGK + E+VF GYGI A D +Y++Y ++DVKDK+VI+MRR P+Q D   PFA  HGISR+A L  K+S AF  GAK ++FVND Y+    K++  E     +E+      K EK   DK E     L+ A   + Q ++ L +   D+LMEFGY G+  G+S    HI+ + CNE+ K     TL E+E +IDET +P S  L  WK
Sbjct:  105 GAKLGSPNSLTLTGPDGKTISLEMGKNFEVCSFGGSGKIEGELVFAGYGIVATDLEYDEYDSIDVKDKIVIVMRRNPKQSDPHGPFAVGHGISRHAGLTTKLSRAFSNGAKGVIFVNDPYTVNSEKEQLEE----QVEKAAAQVSKLEKENGDKSE-----LETARTHLSQVKEILAKHVADKLMEFGYGGTRSGKSPATFHISQDVCNEILKPTLGKTLSEIEAQIDETGEPFSRPLEGWK 337          
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Match: A0A2E7DAU5_9PLAN (Aminopeptidase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7DAU5_9PLAN)

HSP 1 Score: 203 bits (517), Expect = 9.140e-58
Identity = 120/248 (48.39%), Postives = 155/248 (62.50%), Query Frame = 1
Query:    4 TGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGYGIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHG-ISRYAALRYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWEKAAKDKEETSAVSLKK---ALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSIPIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA 735
            TGSKL   N L   GP+GK I L   KDF  CSFGGSGKF+ EIVF GYGID++   YND+ +VDVKDKVVIIMRRTPQQG+   PF   HG +SR+AAL  KVS AF KGA AI+FV+D +S++E   E         ++++ A    EK   D  E  A + K+   A+  V++AR +  ++  D LM FGYAG+G   ++P  HIT E C++L K     TL +LE  ID+  KP++  L  WKA
Sbjct:   87 TGSKLLEPNSLTFVGPEGKKIELKMTKDFNVCSFGGSGKFEQEIVFLGYGIDSKP--YNDFKDVDVKDKVVIIMRRTPQQGNPHGPFPSVHGRMSRHAALTTKVSNAFRKGAAAIIFVSDPHSSREKVAETESFIAKTEKQVVDAAIALEKTPADNAEKLATARKQLSDAVKRVERARASKGDSK-DPLMNFGYAGNGRPNAVPTFHITQEVCDQLLKATRDKTLAQLEADIDKDLKPQNGVLKGWKA 331          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94844.21881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PR69_9PLAN8.190e-169100.00Aminopeptidase YwaD n=6 Tax=Gimesia TaxID=1649453 ... [more]
A0A517Q9H9_9PLAN8.870e-15089.39Aminopeptidase YwaD n=4 Tax=Gimesia panareensis Ta... [more]
A0A518IEW4_9PLAN9.880e-14184.49Aminopeptidase YwaD n=2 Tax=Gimesia TaxID=1649453 ... [more]
A0A517VV83_9PLAN1.040e-13481.63Aminopeptidase YwaD n=2 Tax=Gimesia aquarii TaxID=... [more]
A0A350KBR3_9PLAN9.800e-13379.24Aminopeptidase (Fragment) n=1 Tax=Planctomycetacea... [more]
A0A517XE61_9PLAN3.980e-13279.18Aminopeptidase YwaD n=9 Tax=Planctomycetaceae TaxI... [more]
UPI00141F0CE99.110e-6149.00M20/M25/M40 family metallo-hydrolase n=1 Tax=Rubin... [more]
A0A4P5XS01_9BACT1.020e-6048.00Aminopeptidase n=2 Tax=Planctomycetes TaxID=203682... [more]
A0A517QLP9_9PLAN6.860e-6047.11Aminopeptidase YwaD n=1 Tax=Thalassoglobus polymor... [more]
A0A2E7DAU5_9PLAN9.140e-5848.39Aminopeptidase n=1 Tax=Planctomycetaceae bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94844contigM-pyrifera_M_contig94844:2..736 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score406.0
Seed ortholog evalue1.3e-110
Seed eggNOG ortholog344747.PM8797T_25601
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PA domain
EggNOG OGs2IX8E@203682,COG0265@1,COG0265@2,COG2234@1,COG2234@2
COG Functional cat.O
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size735
Cds size735
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816862.3198605-CDS-M-pyrifera_M_contig94844:1..7361622816862.3198605-CDS-M-pyrifera_M_contig94844:1..736Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94844 2..736 -
1692278222.2939417-CDS-M-pyrifera_M_contig94844:1..7361692278222.2939417-CDS-M-pyrifera_M_contig94844:1..736Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94844 2..736 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94844.21881.1prot_M-pyrifera_M_contig94844.21881.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94844 2..736 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94844.21881.1

>prot_M-pyrifera_M_contig94844.21881.1 ID=prot_M-pyrifera_M_contig94844.21881.1|Name=mRNA_M-pyrifera_M_contig94844.21881.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
NTGSKLGPTNELQLTGPDGKTIPLAYDKDFRSCSFGGSGKFDAEIVFCGY
GIDAQDAKYNDYANVDVKDKVVIIMRRTPQQGDKESPFAGAHGISRYAAL
RYKVSTAFGKGAKAILFVNDYYSTQEHKKEARELEQDAIEELILATEKWE
KAAKDKEETSAVSLKKALHDVQQARKNLKEAHFDRLMEFGYAGSGDGRSI
PIAHITIEKCNELFKDAGKPTLQELEGKIDETFKPESFALPQWKA
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mRNA from alignment at M-pyrifera_M_contig94844:2..736-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94844.21881.1 ID=mRNA_M-pyrifera_M_contig94844.21881.1|Name=mRNA_M-pyrifera_M_contig94844.21881.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=735bp|location=Sequence derived from alignment at M-pyrifera_M_contig94844:2..736- (Macrocystis pyrifera P11B4 male)
AACACCGGCAGCAAACTGGGACCGACCAACGAACTGCAGTTGACCGGACC GGATGGAAAAACAATTCCCCTCGCCTACGACAAAGATTTCCGTTCCTGCT CGTTCGGCGGCTCGGGAAAATTTGATGCGGAAATCGTCTTCTGCGGATAC GGCATCGATGCCCAGGACGCGAAATACAATGACTATGCCAACGTCGATGT GAAAGACAAGGTCGTCATCATCATGCGTCGCACGCCTCAGCAGGGCGATA AAGAGAGCCCGTTCGCAGGGGCCCATGGAATTTCGCGTTACGCAGCTCTC CGCTACAAAGTGAGCACCGCATTCGGCAAAGGGGCCAAAGCGATCCTGTT CGTCAACGATTACTATTCTACGCAGGAACACAAAAAAGAGGCCCGCGAAC TGGAACAGGACGCGATTGAAGAACTGATTCTCGCTACCGAAAAATGGGAA AAAGCAGCGAAGGATAAAGAGGAAACCAGTGCTGTTTCACTGAAGAAAGC TCTGCACGACGTGCAGCAGGCACGCAAGAATCTCAAAGAGGCGCATTTCG ACCGGCTGATGGAATTTGGTTATGCCGGCAGCGGAGATGGCCGTTCGATT CCAATCGCTCACATCACCATCGAAAAGTGTAACGAACTCTTCAAGGACGC AGGGAAACCAACGCTGCAGGAACTGGAAGGTAAAATCGACGAAACTTTCA AGCCGGAAAGTTTCGCGTTACCCCAGTGGAAAGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig94844:2..736-

>mRNA_M-pyrifera_M_contig94844.21881.1 ID=mRNA_M-pyrifera_M_contig94844.21881.1|Name=mRNA_M-pyrifera_M_contig94844.21881.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig94844:2..736- (Macrocystis pyrifera P11B4 male)
AACACCGGCAGCAAACTGGGACCGACCAACGAACTGCAGTTGACCGGACC
GGATGGAAAAACAATTCCCCTCGCCTACGACAAAGATTTCCGTTCCTGCT
CGTTCGGCGGCTCGGGAAAATTTGATGCGGAAATCGTCTTCTGCGGATAC
GGCATCGATGCCCAGGACGCGAAATACAATGACTATGCCAACGTCGATGT
GAAAGACAAGGTCGTCATCATCATGCGTCGCACGCCTCAGCAGGGCGATA
AAGAGAGCCCGTTCGCAGGGGCCCATGGAATTTCGCGTTACGCAGCTCTC
CGCTACAAAGTGAGCACCGCATTCGGCAAAGGGGCCAAAGCGATCCTGTT
CGTCAACGATTACTATTCTACGCAGGAACACAAAAAAGAGGCCCGCGAAC
TGGAACAGGACGCGATTGAAGAACTGATTCTCGCTACCGAAAAATGGGAA
AAAGCAGCGAAGGATAAAGAGGAAACCAGTGCTGTTTCACTGAAGAAAGC
TCTGCACGACGTGCAGCAGGCACGCAAGAATCTCAAAGAGGCGCATTTCG
ACCGGCTGATGGAATTTGGTTATGCCGGCAGCGGAGATGGCCGTTCGATT
CCAATCGCTCACATCACCATCGAAAAGTGTAACGAACTCTTCAAGGACGC
AGGGAAACCAACGCTGCAGGAACTGGAAGGTAAAATCGACGAAACTTTCA
AGCCGGAAAGTTTCGCGTTACCCCAGTGGAAAGCCAACACCGGCAGCAAA
CTGGGACCGACCAACGAACTGCAGTTGACCGGACCGGATGGAAAAACAAT
TCCCCTCGCCTACGACAAAGATTTCCGTTCCTGCTCGTTCGGCGGCTCGG
GAAAATTTGATGCGGAAATCGTCTTCTGCGGATACGGCATCGATGCCCAG
GACGCGAAATACAATGACTATGCCAACGTCGATGTGAAAGACAAGGTCGT
CATCATCATGCGTCGCACGCCTCAGCAGGGCGATAAAGAGAGCCCGTTCG
CAGGGGCCCATGGAATTTCGCGTTACGCAGCTCTCCGCTACAAAGTGAGC
ACCGCATTCGGCAAAGGGGCCAAAGCGATCCTGTTCGTCAACGATTACTA
TTCTACGCAGGAACACAAAAAAGAGGCCCGCGAACTGGAACAGGACGCGA
TTGAAGAACTGATTCTCGCTACCGAAAAATGGGAAAAAGCAGCGAAGGAT
AAAGAGGAAACCAGTGCTGTTTCACTGAAGAAAGCTCTGCACGACGTGCA
GCAGGCACGCAAGAATCTCAAAGAGGCGCATTTCGACCGGCTGATGGAAT
TTGGTTATGCCGGCAGCGGAGATGGCCGTTCGATTCCAATCGCTCACATC
ACCATCGAAAAGTGTAACGAACTCTTCAAGGACGCAGGGAAACCAACGCT
GCAGGAACTGGAAGGTAAAATCGACGAAACTTTCAAGCCGGAAAGTTTCG
CGTTACCCCAGTGGAAAGCC
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