mRNA_M-pyrifera_M_contig94648.21841.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94648.21841.1
Unique NamemRNA_M-pyrifera_M_contig94648.21841.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A518A2A3_9PLAN (Elongation factor G n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518A2A3_9PLAN)

HSP 1 Score: 446 bits (1148), Expect = 2.970e-151
Identity = 224/246 (91.06%), Postives = 241/246 (97.97%), Query Frame = 1
Query:    1 GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            GALRAVETALILLNAGHGVEINALRVSRM+QEAGIARMIV NKCDTENIDYDSL+ S+RETFG++CVPINLPVGLGADF+AVCDLVN+SEPP  GTLGDPESTRQ+LIEAIVES+EGLLERFF+GEELSA ELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRME+T+DGRSV+IDPSP+QPFVAQVIKTRIDPFISKMSYLRVFSG+LDKD++VVNVRTGKPVRINQLL
Sbjct:   93 GALRAVETALILLNAGHGVEINALRVSRMSQEAGIARMIVFNKCDTENIDYDSLIESVRETFGAHCVPINLPVGLGADFKAVCDLVNYSEPPPAGTLGDPESTRQSLIEAIVESNEGLLERFFEGEELSAAELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEETRDGRSVMIDPSPDQPFVAQVIKTRIDPFISKMSYLRVFSGKLDKDSSVVNVRTGKPVRINQLL 338          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A518I7Y6_9PLAN (Elongation factor G n=3 Tax=Gimesia TaxID=1649453 RepID=A0A518I7Y6_9PLAN)

HSP 1 Score: 414 bits (1065), Expect = 9.570e-139
Identity = 208/246 (84.55%), Postives = 232/246 (94.31%), Query Frame = 1
Query:    1 GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            GALRAVETAL+LLNAGHGVEINALRVS+MAQEAGIARMIVLNKCD ENIDYDSLL+S+RETFGS+C+PINLPVGLGADF+AV DLV  ++    G LGDPE TRQ LIEAIVES+E LLERFF+GEELSA+EL ANIPKAMAAGTLIPVLFMSAKTGVGV+EFM+AMSNYTLCPQDI+RMEQTKDGRSV++DPSP+QPFVAQVIKTRIDPFISKM+YLRVFSG++ KD++VVNVRTGKPVR+NQLL
Sbjct:   93 GALRAVETALVLLNAGHGVEINALRVSKMAQEAGIARMIVLNKCDAENIDYDSLLNSVRETFGSHCIPINLPVGLGADFKAVHDLVKNAQASEAGVLGDPEGTRQELIEAIVESNEALLERFFEGEELSAQELRANIPKAMAAGTLIPVLFMSAKTGVGVAEFMEAMSNYTLCPQDIKRMEQTKDGRSVMLDPSPDQPFVAQVIKTRIDPFISKMNYLRVFSGKISKDSSVVNVRTGKPVRLNQLL 338          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A517VCJ5_9PLAN (Elongation factor G n=12 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VCJ5_9PLAN)

HSP 1 Score: 405 bits (1041), Expect = 3.910e-135
Identity = 205/246 (83.33%), Postives = 227/246 (92.28%), Query Frame = 1
Query:    1 GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            GALRAVETALILLNAGHGVEINALRVS+MAQEAGIARMIVLNKCD +NIDY++LL+S+R+TFGS C+PINLPVGLGADF AV DLV  +       LGDP  TRQALIEAI+ES+E LLERFF+GEE+S  ELS NIPKAMAAGTLIPVLFMSAKTGVGV+EFMDAMSNYTLCPQDIQR+EQTKDGRSV++DPSP+QPFVAQVIKTRIDPFISKMSYLRVFSG+L+KD++VVNVRTGKPVRINQLL
Sbjct:   93 GALRAVETALILLNAGHGVEINALRVSKMAQEAGIARMIVLNKCDADNIDYETLLNSVRDTFGSQCIPINLPVGLGADFNAVYDLVKKTTASDSDVLGDPAETRQALIEAIIESNEALLERFFEGEEISPVELSRNIPKAMAAGTLIPVLFMSAKTGVGVAEFMDAMSNYTLCPQDIQRIEQTKDGRSVMLDPSPDQPFVAQVIKTRIDPFISKMSYLRVFSGKLNKDSSVVNVRTGKPVRINQLL 338          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A3B1E030_9ZZZZ (Elongation factor G-like protein TM_1651 n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1E030_9ZZZZ)

HSP 1 Score: 259 bits (662), Expect = 1.300e-78
Identity = 122/246 (49.59%), Postives = 177/246 (71.95%), Query Frame = 1
Query:    1 GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            GALRAVET++ ++NAGH VE+N  R  R A +AG+ RMIVLNKCD++N+++D L+  ++E+FG  CVP+N+PVGLG DF  V   +   +   +G + +P +  QA+++AIVE+ E L+ RF +GEELS  E+SA + KA+A GTL+P+  +SAKT VGV EF DA++ Y L P +++R    + G  VV+D SP+ PF+AQV KTRIDPF++KMSY+R++ G L KDT+V +  + KP++   LL
Sbjct:   93 GALRAVETSVTVVNAGHSVEVNTRRTFRRAGDAGVGRMIVLNKCDSDNLNFDQLIKDLQESFGQCCVPLNVPVGLGKDFSGVVSTLALPDSIPDGVVANPAAINQAVMDAIVEADEELMMRFLEGEELSTNEISAGMTKAIATGTLVPIFCLSAKTTVGVKEFTDALAAYGLSPSEVERKAINEAGEEVVVDQSPDAPFIAQVFKTRIDPFVAKMSYMRLYGGTLKKDTSVESSTSSKPLKTGHLL 338          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A2D6SRA7_9PLAN (GTP-binding protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SRA7_9PLAN)

HSP 1 Score: 253 bits (646), Expect = 2.970e-76
Identity = 125/246 (50.81%), Postives = 170/246 (69.11%), Query Frame = 1
Query:    1 GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            GA+RAVET ++ ++AG GVE+N  RV + A  AG AR+I++NKCD ENID D LL  I + FG+ CVP+N+PVG+G++F  V   +N  +   +G   DP    Q L++A+VES E L+ER+F+GE LS  E++  + KAMAAGTLIP+ F SAK  VGV E M A+S+Y L P D QR+    +     ++  P+ P VAQV KTRIDPF+SKMSYLR+++G + KDT+V N RTG  ++I QLL
Sbjct:   93 GAMRAVETVVVTVSAGSGVEVNTRRVFQQAGAAGDARIILVNKCDVENIDLDGLLAEIEDNFGAACVPLNVPVGIGSEFSGVVSTLNVPDSIPDGVQLDPSQINQKLLDAVVESDEALMERYFEGETLSPEEVAGAVTKAMAAGTLIPIFFASAKMDVGVEELMAALSDYALSPVDRQRVSLDDEDAESPLEQQPDSPLVAQVFKTRIDPFVSKMSYLRIYAGSVKKDTSVKNHRTGNSLKIGQLL 338          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: UPI0019CA5007 (GTP-binding protein n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI0019CA5007)

HSP 1 Score: 236 bits (601), Expect = 5.720e-73
Identity = 118/245 (48.16%), Postives = 175/245 (71.43%), Query Frame = 1
Query:    4 ALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            A+ A ETA++ +NA  G+E N  R   +A +A +AR+IVLNK D ENI++ SL+  I+ETFG NCVP+N+P G G++F+AV   +N +     G + DP +   A+++AIVE+ E L+ER+ +GEELSA E+   + KA+A G+LIP+  +SAK+GVG+ E MDA++++ L P ++ R   +  G  V +  + + PFVAQV KTRIDPF+SKMS++RV SG+L KD+ V ++RTGKPV+++QLL
Sbjct:  113 AVCAAETAVVTINATAGIEANTRRTFELAGKAHLARVIVLNKLDGENINFVSLVDRIQETFGKNCVPMNVPCGAGSNFKAVKSTLNLTHAGQNGAVVDPAAYGAAVMDAIVEADEELMERYLEGEELSADEVLGGVNKAIATGSLIPIFCVSAKSGVGIPELMDAVADFALTPGELVRHGTSNGGGDVEVTSTEDAPFVAQVFKTRIDPFVSKMSFIRVLSGKLTKDSMVKDMRTGKPVKVHQLL 357          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A3D1DEE4_9PLAN (Elongation factor G (Fragment) n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D1DEE4_9PLAN)

HSP 1 Score: 236 bits (603), Expect = 5.100e-72
Identity = 121/247 (48.99%), Postives = 176/247 (71.26%), Query Frame = 1
Query:    1 GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLG-DPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            GAL AVETA+++++AG G+E+N  R    A +AG+ RMI++NKCD +N+ ++ L+  I+ETFG +CVP+ LPVG+G++F  V + ++  +    G +G DP    Q+L++AIVE+ E L+ER+ +GEELS  ELSA +  A+A+GTLIP+   S+KT VGV EF+DA+++ +L P D+ R   + D   V +D   +   VAQV KTRIDPF+SKMS++RVFSG L+KD++V   R GKPV+I QLL
Sbjct:   93 GALSAVETAVVVISAGAGIEVNTRRAFNAAGDAGLGRMILINKCDMDNVQFEELVGEIQETFGHSCVPLTLPVGIGSEFSGVVNTLDLPDD-VPGDVGMDPTEVNQSLMDAIVEADEELMERYLEGEELSEAELSAGVSTAIASGTLIPIFCTSSKTDVGVEEFLDALASCSLAPADVSRSMNSGD-EEVAVDAGGDT-LVAQVFKTRIDPFVSKMSFIRVFSGTLEKDSSVSVPRLGKPVKIGQLL 336          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A2E8FI68_9PLAN (GTP-binding protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FI68_9PLAN)

HSP 1 Score: 239 bits (611), Expect = 3.900e-71
Identity = 121/246 (49.19%), Postives = 166/246 (67.48%), Query Frame = 1
Query:    1 GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            GAL A ETA+++++AG G+E+N  R    A  AG+ RMI++NKCD +N+ +DSL+  I++ FG  CVP+N+PVG G  F  V   +   +   +G   DP    QAL++AIV++ E L+ER+ +GEELS  ELS  + KA+AAGTLIP+L  S+KTGVGV EF++ M N  L P D+ R     +   V IDP+ +   VAQV KTRIDPF+SKMS++RVFSG L KD++V   R GK V+I QL+
Sbjct:   93 GALAATETAVVVISAGAGIEVNTRRAFDAAGTAGLGRMILINKCDMDNVQFDSLVEEIQKVFGRGCVPLNVPVGTGDSFNGVVSTLEVPDSIPDGVEIDPTDVNQALMDAIVDADEELMERYLEGEELSTAELSKGVGKAIAAGTLIPILSASSKTGVGVDEFLEVMVNCALAPSDLSRTMTAAEDDEVAIDPADDS-LVAQVFKTRIDPFVSKMSFIRVFSGTLKKDSSVQVPRLGKAVKIGQLI 337          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A3L7PEL5_9BACT (GTP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PEL5_9BACT)

HSP 1 Score: 234 bits (597), Expect = 5.810e-71
Identity = 119/245 (48.57%), Postives = 170/245 (69.39%), Query Frame = 1
Query:    4 ALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            A+ A ETALI +NAG G+E N  R   +A +A +AR++VLNK D ENI +  L+  IRETFG+NC+P+N+P G GA F+ V   +N S     G + DP +   A+++AIVE+ E L+ER+ +GE LSA E+   + KA+A G+LIP+  +SAKTGVGV E M+A++++ L P ++ R   +  G  V +  S + P VAQV KTRIDPF+SKMS++RV SG + KD+ V ++RTGKPV+++QLL
Sbjct:   94 AVCAAETALITINAGAGIEANTRRTFELAGKAHLARVLVLNKLDGENISFVRLVDQIRETFGANCIPMNVPCGAGATFKRVKSTLNLSHAEENGAVVDPSAYGAAMMDAIVEADEELMERYLEGETLSADEVLGGVNKAIALGSLIPIFCVSAKTGVGVPELMNAVADFALTPGELVRHATSGGGDDVELSSSDDGPLVAQVFKTRIDPFVSKMSFIRVLSGRMTKDSMVKDMRTGKPVKVHQLL 338          
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Match: A0A3B8PNS8_9PLAN (Elongation factor G n=4 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8PNS8_9PLAN)

HSP 1 Score: 236 bits (603), Expect = 5.750e-70
Identity = 121/247 (48.99%), Postives = 176/247 (71.26%), Query Frame = 1
Query:    1 GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENIDYDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLG-DPESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVLFMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFVAQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL 738
            GAL AVETA+++++AG G+E+N  R    A +AG+ RMI++NKCD +N+ ++ L+  I+ETFG +CVP+ LPVG+G++F  V + ++  +    G +G DP    Q+L++AIVE+ E L+ER+ +GEELS  ELSA +  A+A+GTLIP+   S+KT VGV EF+DA+++ +L P D+ R   + D   V +D   +   VAQV KTRIDPF+SKMS++RVFSG L+KD++V   R GKPV+I QLL
Sbjct:   93 GALSAVETAVVVISAGAGIEVNTRRAFNAAGDAGLGRMILINKCDMDNVQFEELVGEIQETFGHSCVPLTLPVGIGSEFSGVVNTLDLPDD-VPGDVGMDPTEVNQSLMDAIVEADEELMERYLEGEELSEAELSAGVSTAIASGTLIPIFCTSSKTDVGVEEFLDALASCSLAPADVSRSMNSGD-EEVAVDAGGDT-LVAQVFKTRIDPFVSKMSFIRVFSGTLEKDSSVSVPRLGKPVKIGQLL 336          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94648.21841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A2A3_9PLAN2.970e-15191.06Elongation factor G n=9 Tax=Gimesia TaxID=1649453 ... [more]
A0A518I7Y6_9PLAN9.570e-13984.55Elongation factor G n=3 Tax=Gimesia TaxID=1649453 ... [more]
A0A517VCJ5_9PLAN3.910e-13583.33Elongation factor G n=12 Tax=Planctomycetaceae Tax... [more]
A0A3B1E030_9ZZZZ1.300e-7849.59Elongation factor G-like protein TM_1651 n=1 Tax=h... [more]
A0A2D6SRA7_9PLAN2.970e-7650.81GTP-binding protein n=1 Tax=Planctomycetaceae bact... [more]
UPI0019CA50075.720e-7348.16GTP-binding protein n=1 Tax=Candidatus Saccharimon... [more]
A0A3D1DEE4_9PLAN5.100e-7248.99Elongation factor G (Fragment) n=2 Tax=Planctomyce... [more]
A0A2E8FI68_9PLAN3.900e-7149.19GTP-binding protein n=1 Tax=Planctomycetaceae bact... [more]
A0A3L7PEL5_9BACT5.810e-7148.57GTP-binding protein n=1 Tax=Planctomycetes bacteri... [more]
A0A3B8PNS8_9PLAN5.750e-7048.99Elongation factor G n=4 Tax=Planctomycetaceae bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94648contigM-pyrifera_M_contig94648:1..738 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score404.8
Seed ortholog evalue2.8e-110
Seed eggNOG ortholog344747.PM8797T_18244
Preferred namefusA2
KEGG koko:K02355
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944
EggNOG free text desc.COG0480 Translation elongation factors
EggNOG OGs2IX5V@203682,COG0480@1,COG0480@2
COG Functional cat.J
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Exons1
Model size738
Cds size738
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816860.1109726-CDS-M-pyrifera_M_contig94648:0..7381622816860.1109726-CDS-M-pyrifera_M_contig94648:0..738Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94648 1..738 -
1692278220.978281-CDS-M-pyrifera_M_contig94648:0..7381692278220.978281-CDS-M-pyrifera_M_contig94648:0..738Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94648 1..738 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94648.21841.1prot_M-pyrifera_M_contig94648.21841.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94648 1..738 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94648.21841.1

>prot_M-pyrifera_M_contig94648.21841.1 ID=prot_M-pyrifera_M_contig94648.21841.1|Name=mRNA_M-pyrifera_M_contig94648.21841.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
GALRAVETALILLNAGHGVEINALRVSRMAQEAGIARMIVLNKCDTENID
YDSLLHSIRETFGSNCVPINLPVGLGADFQAVCDLVNFSEPPAEGTLGDP
ESTRQALIEAIVESSEGLLERFFDGEELSARELSANIPKAMAAGTLIPVL
FMSAKTGVGVSEFMDAMSNYTLCPQDIQRMEQTKDGRSVVIDPSPEQPFV
AQVIKTRIDPFISKMSYLRVFSGELDKDTAVVNVRTGKPVRINQLL
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mRNA from alignment at M-pyrifera_M_contig94648:1..738-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94648.21841.1 ID=mRNA_M-pyrifera_M_contig94648.21841.1|Name=mRNA_M-pyrifera_M_contig94648.21841.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig94648:1..738- (Macrocystis pyrifera P11B4 male)
GGTGCTCTGCGTGCCGTCGAGACCGCTCTGATTCTGCTCAACGCCGGTCA TGGCGTGGAAATCAATGCCCTGCGAGTTTCCCGGATGGCCCAGGAAGCAG GCATCGCCCGCATGATCGTCCTCAATAAATGTGATACAGAAAATATCGAC TACGATTCACTGCTCCATTCCATCCGCGAAACATTCGGTTCCAACTGTGT TCCCATTAACCTGCCTGTGGGACTCGGGGCCGATTTTCAAGCGGTGTGTG ATCTGGTTAATTTTTCCGAGCCACCTGCAGAGGGAACGCTGGGAGATCCG GAGTCAACCCGCCAGGCGCTGATCGAAGCGATTGTGGAATCGAGTGAAGG GTTACTGGAACGGTTCTTTGATGGAGAAGAACTCAGTGCCCGGGAACTGT CTGCAAACATTCCCAAGGCGATGGCGGCGGGCACACTGATTCCCGTACTC TTCATGAGCGCAAAAACCGGCGTGGGTGTCAGTGAATTTATGGACGCCAT GTCCAACTACACATTGTGTCCGCAGGATATTCAGCGAATGGAACAGACCA AAGATGGTCGTTCGGTGGTGATTGACCCTTCGCCGGAGCAGCCGTTTGTT GCTCAGGTGATCAAGACACGCATCGACCCCTTCATTTCCAAGATGAGCTA TCTGCGAGTCTTCTCTGGAGAACTGGATAAAGACACGGCTGTGGTCAATG TCCGCACGGGGAAGCCGGTTCGAATCAATCAACTGCTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig94648:1..738-

>mRNA_M-pyrifera_M_contig94648.21841.1 ID=mRNA_M-pyrifera_M_contig94648.21841.1|Name=mRNA_M-pyrifera_M_contig94648.21841.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1476bp|location=Sequence derived from alignment at M-pyrifera_M_contig94648:1..738- (Macrocystis pyrifera P11B4 male)
GGTGCTCTGCGTGCCGTCGAGACCGCTCTGATTCTGCTCAACGCCGGTCA
TGGCGTGGAAATCAATGCCCTGCGAGTTTCCCGGATGGCCCAGGAAGCAG
GCATCGCCCGCATGATCGTCCTCAATAAATGTGATACAGAAAATATCGAC
TACGATTCACTGCTCCATTCCATCCGCGAAACATTCGGTTCCAACTGTGT
TCCCATTAACCTGCCTGTGGGACTCGGGGCCGATTTTCAAGCGGTGTGTG
ATCTGGTTAATTTTTCCGAGCCACCTGCAGAGGGAACGCTGGGAGATCCG
GAGTCAACCCGCCAGGCGCTGATCGAAGCGATTGTGGAATCGAGTGAAGG
GTTACTGGAACGGTTCTTTGATGGAGAAGAACTCAGTGCCCGGGAACTGT
CTGCAAACATTCCCAAGGCGATGGCGGCGGGCACACTGATTCCCGTACTC
TTCATGAGCGCAAAAACCGGCGTGGGTGTCAGTGAATTTATGGACGCCAT
GTCCAACTACACATTGTGTCCGCAGGATATTCAGCGAATGGAACAGACCA
AAGATGGTCGTTCGGTGGTGATTGACCCTTCGCCGGAGCAGCCGTTTGTT
GCTCAGGTGATCAAGACACGCATCGACCCCTTCATTTCCAAGATGAGCTA
TCTGCGAGTCTTCTCTGGAGAACTGGATAAAGACACGGCTGTGGTCAATG
TCCGCACGGGGAAGCCGGTTCGAATCAATCAACTGCTTGGTGCTCTGCGT
GCCGTCGAGACCGCTCTGATTCTGCTCAACGCCGGTCATGGCGTGGAAAT
CAATGCCCTGCGAGTTTCCCGGATGGCCCAGGAAGCAGGCATCGCCCGCA
TGATCGTCCTCAATAAATGTGATACAGAAAATATCGACTACGATTCACTG
CTCCATTCCATCCGCGAAACATTCGGTTCCAACTGTGTTCCCATTAACCT
GCCTGTGGGACTCGGGGCCGATTTTCAAGCGGTGTGTGATCTGGTTAATT
TTTCCGAGCCACCTGCAGAGGGAACGCTGGGAGATCCGGAGTCAACCCGC
CAGGCGCTGATCGAAGCGATTGTGGAATCGAGTGAAGGGTTACTGGAACG
GTTCTTTGATGGAGAAGAACTCAGTGCCCGGGAACTGTCTGCAAACATTC
CCAAGGCGATGGCGGCGGGCACACTGATTCCCGTACTCTTCATGAGCGCA
AAAACCGGCGTGGGTGTCAGTGAATTTATGGACGCCATGTCCAACTACAC
ATTGTGTCCGCAGGATATTCAGCGAATGGAACAGACCAAAGATGGTCGTT
CGGTGGTGATTGACCCTTCGCCGGAGCAGCCGTTTGTTGCTCAGGTGATC
AAGACACGCATCGACCCCTTCATTTCCAAGATGAGCTATCTGCGAGTCTT
CTCTGGAGAACTGGATAAAGACACGGCTGTGGTCAATGTCCGCACGGGGA
AGCCGGTTCGAATCAATCAACTGCTT
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