mRNA_M-pyrifera_M_contig94637.21837.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94637.21837.1
Unique NamemRNA_M-pyrifera_M_contig94637.21837.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: A0A7V8V3N3_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V3N3_9BACT)

HSP 1 Score: 474 bits (1220), Expect = 3.330e-167
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
Query:   55 DTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 738
            DTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL
Sbjct:  113 DTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 340          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: A0A518CDM1_9BACT (Uncharacterized protein n=2 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518CDM1_9BACT)

HSP 1 Score: 453 bits (1165), Expect = 7.870e-159
Identity = 221/257 (85.99%), Postives = 232/257 (90.27%), Query Frame = 1
Query:    1 EIEKPKETKQEE-----------EPXXXEDTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 738
            E+EKP E K E            +P   EDTYGYFEYVPYGQYYHVDYW G+A WKNSAELGLNGQTGNTESNSLRVGAKIKREG  TIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLK+H+ WSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGS+ +HQ+TEKQSFQ+KFEFFPAFEADQGYR VTDASYTIALDHGLSLK+SAEDRYDSTPN+RKRNDL
Sbjct:   84 EVEKPAEAKPEXXXXXXXXXXXXKPEEEEDTYGYFEYVPYGQYYHVDYWFGKATWKNSAELGLNGQTGNTESNSLRVGAKIKREGVATIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKIHERWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSDFSHQITEKQSFQIKFEFFPAFEADQGYRHVTDASYTIALDHGLSLKLSAEDRYDSTPNNRKRNDL 340          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: A0A2S8F7T5_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8F7T5_9BACT)

HSP 1 Score: 450 bits (1158), Expect = 9.480e-158
Identity = 219/247 (88.66%), Postives = 234/247 (94.74%), Query Frame = 1
Query:    1 EIEKPKETKQEEEPXXXE-DTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 738
            E+EKPK+ K+    XXXE DTYGYF+YVPYGQYYHVDYW G+A WKNSAELGLNGQTGNTESNSLRVGAKIKREG  T+FSADIRHLRTSDKDGLTQNNAYVKHKLEWPLK+H+ WSLFEKTD+EYD FKAFDMRLVFNGGVSYKPYKTDATDWTLS+GSGFSQEYGSPQKGIIPEATLGSEL HQ+TEKQSFQ+KFEFFPAFEA+QGYRSVTDASYTIALDHGLSLK+SAEDRYDSTPN+RKRNDL
Sbjct:   95 EVEKPKDAKKXXXXXXXEEDTYGYFDYVPYGQYYHVDYWFGKAKWKNSAELGLNGQTGNTESNSLRVGAKIKREGDATVFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKIHEKWSLFEKTDVEYDEFKAFDMRLVFNGGVSYKPYKTDATDWTLSIGSGFSQEYGSPQKGIIPEATLGSELTHQITEKQSFQIKFEFFPAFEANQGYRSVTDASYTIALDHGLSLKLSAEDRYDSTPNNRKRNDL 341          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: A0A2S8GKC3_9BACT (Uncharacterized protein n=2 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GKC3_9BACT)

HSP 1 Score: 387 bits (993), Expect = 6.190e-133
Identity = 177/229 (77.29%), Postives = 201/229 (87.77%), Query Frame = 1
Query:   52 EDTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 738
            E +YGY +YVPYGQYY VDYW G+A WK SAELG NGQTGNTE+ SLRVGAKI+REG  TIF+++ +HLRTSDK+GLTQNNA+ KHKL+WPLKLH+NWSLFE T +EYD FKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQE+GSPQKGIIPEAT+GS+ +H++T+ Q   L  +FFPAF ADQGYR   DASYT+ALDHGLS K+SA DRYDSTPNDRKRNDL
Sbjct:   94 EKSYGYLDYVPYGQYYAVDYWFGDATWKKSAELGFNGQTGNTETTSLRVGAKIRREGAATIFTSEFKHLRTSDKEGLTQNNAFFKHKLDWPLKLHENWSLFENTSLEYDEFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEFGSPQKGIIPEATMGSDFSHKITDSQKIALNTDFFPAFAADQGYRFTVDASYTVALDHGLSFKLSAFDRYDSTPNDRKRNDL 322          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: A0A2S8FP56_9BACT (Uncharacterized protein n=2 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FP56_9BACT)

HSP 1 Score: 375 bits (962), Expect = 1.630e-127
Identity = 168/229 (73.36%), Postives = 200/229 (87.34%), Query Frame = 1
Query:   52 EDTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 738
            E +YGY +Y+PYGQYYH+DYW GEA WKNSAELG NGQTGNT SNSLRVGAKI+REGK TIF+++ +HLRTSD + LTQNNA+ KH+LEWPLKLH+ W+L E T++EYD FKAFD+RLVFNGG+SYKPYKTD +DWTLS GSGFSQE+GSPQKG+IPE + GS+  H+LT+KQS    F+F+PAFEA+QGYR   +ASY+IALDHGLSLK+SA DRYDSTPN+RKRNDL
Sbjct:  142 EKSYGYLDYIPYGQYYHIDYWFGEATWKNSAELGFNGQTGNTISNSLRVGAKIRREGKRTIFTSEFKHLRTSDAENLTQNNAFFKHRLEWPLKLHEKWALHENTNLEYDEFKAFDLRLVFNGGLSYKPYKTDRSDWTLSAGSGFSQEFGSPQKGVIPEGSFGSDFTHKLTDKQSVTFNFDFYPAFEANQGYRFTNEASYSIALDHGLSLKLSAYDRYDSTPNNRKRNDL 370          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: A0A368KRW2_9BACT (DUF481 domain-containing protein n=2 Tax=Blastopirellula cremea TaxID=1031537 RepID=A0A368KRW2_9BACT)

HSP 1 Score: 374 bits (961), Expect = 1.950e-127
Identity = 169/237 (71.31%), Postives = 202/237 (85.23%), Query Frame = 1
Query:   28 QEEEPXXXEDTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 738
            +E E    E +YGY +Y+PYGQYYH+DYW GEA WKNSAELG NGQTGNT SNSLRVGAK++REGK TIF+++ +HLRTSD + LTQNNA+ KH+LEWPLKLH+ W+L E T++EYD FKAFD+RLVFNGG+SYKPYKTD TDWTLS GSGFSQE+GSPQKG+IPEA+ GS+  H LT++QS     +F+PAFEA++GYR   +ASYTIALDHGLSLK+SA DRYDSTPN+RKRNDL
Sbjct:  129 EEIEDLVEEHSYGYLDYIPYGQYYHIDYWFGEATWKNSAELGFNGQTGNTISNSLRVGAKVRREGKRTIFTSEFKHLRTSDAENLTQNNAFYKHRLEWPLKLHERWALHENTNLEYDEFKAFDLRLVFNGGLSYKPYKTDRTDWTLSAGSGFSQEFGSPQKGVIPEASFGSDFTHNLTDRQSITFNLDFYPAFEANEGYRFTNEASYTIALDHGLSLKMSAYDRYDSTPNNRKRNDL 365          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: UPI001CCC47A4 (DUF481 domain-containing protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCC47A4)

HSP 1 Score: 365 bits (938), Expect = 2.620e-124
Identity = 169/213 (79.34%), Postives = 188/213 (88.26%), Query Frame = 1
Query:  100 HVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 738
            H+DYW G A+W NSAELGLNGQTGNTESNSLRVGAKIKR G+ TIFS+ +RHLRT+DKDGLTQNNAY  HKLEWPLKLH+NWSLFE T++EYD FKAFDMRLVFNGGVSYKPYKTD T+WTLS GSGFSQE+GSPQKGI+PEATLG+E  HQ+TE Q  +  +EFFPAFEA++GYR V DASY IAL  GLSLK+SA DRYDSTPNDRKRNDL
Sbjct:  128 HIDYWFGPAVWSNSAELGLNGQTGNTESNSLRVGAKIKRSGEHTIFSSQLRHLRTADKDGLTQNNAYFNHKLEWPLKLHENWSLFETTNLEYDEFKAFDMRLVFNGGVSYKPYKTDQTEWTLSAGSGFSQEFGSPQKGIVPEATLGTEFKHQVTEAQKLEFNYEFFPAFEANEGYRFVADASYVIALRDGLSLKLSAVDRYDSTPNDRKRNDL 340          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: A0A2S8G6F7_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8G6F7_9BACT)

HSP 1 Score: 366 bits (940), Expect = 4.080e-124
Identity = 166/227 (73.13%), Postives = 197/227 (86.78%), Query Frame = 1
Query:   58 TYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL 738
            +YGY +YVPYGQY HVDYW GEA WK SAELG NGQTGNT SNSLRVG KI+REG  TIF+++ +HLRTSDKDGLTQ+NA+ KH+LEWPLKLH+ W+L E T++EYDAFKAFD+RLVFNGG+SYKPYKTD TDWTLS GSGFSQE+GSPQ G+IPE + GS+  H++T+KQ+    F+F+PAFEA++GYR   +ASY+IALDHGLSLKISA DRYDSTPN+RKRNDL
Sbjct:  148 SYGYLDYVPYGQYGHVDYWFGEAKWKKSAELGFNGQTGNTISNSLRVGGKIRREGIRTIFTSEFKHLRTSDKDGLTQDNAFFKHRLEWPLKLHERWALHENTNLEYDAFKAFDLRLVFNGGLSYKPYKTDKTDWTLSAGSGFSQEFGSPQMGVIPEGSFGSDFTHKITDKQTLTFNFDFYPAFEANEGYRFTNEASYSIALDHGLSLKISAYDRYDSTPNNRKRNDL 374          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: UPI001E4968C1 (DUF481 domain-containing protein n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E4968C1)

HSP 1 Score: 220 bits (561), Expect = 1.500e-67
Identity = 112/228 (49.12%), Postives = 149/228 (65.35%), Query Frame = 1
Query:   61 YGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDH--GLSLKISAEDRYDSTPN-DRKRND 735
            YGY  YVP GQY H+DYW GEA W +S ELG+NGQTGNTES SLR GAK+KR G  T   ADI + RTS+    TQ+NA    K+EWP  ++K W ++ K  +EYDAFK F +RL  +GG+ Y+  KTD TD T+ +GSGFS+E+ SP     PE  +    +H   ++ SF+ K+E++P ++    YRS++D  Y I LD    LSLK    +R+DSTP  D+K+ND
Sbjct:   89 YGYLGYVPGGQYVHIDYWFGEAKWDSSVELGINGQTGNTESLSLRSGAKVKRVGAATTTIADIIYARTSNNGVPTQDNALFNAKIEWPF-VNKRWHIYAKNGMEYDAFKDFGLRLWVSGGMGYEVVKTDDTDLTVELGSGFSKEFDSPDDEYKPEGAMTILFDHNFNKRHSFEGKYEYYPEWQEFGEYRSISDIGYKILLDDTANLSLKFGVINRFDSTPGVDKKKND 315          
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Match: A0A5C5V2J5_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula retiformator TaxID=2527970 RepID=A0A5C5V2J5_9BACT)

HSP 1 Score: 218 bits (554), Expect = 1.800e-66
Identity = 111/227 (48.90%), Postives = 147/227 (64.76%), Query Frame = 1
Query:   52 EDTYGYFEYVPYGQYYHVDYWLGEAIWKNSAELGLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAYVKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDATDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFPAFEADQGYRSVTDASYTIALDHG--LSLKISAEDRYDSTPNDRK 726
            E  YGY  YVP G Y H+DYWLG+A W +S ELG+NGQTGNT+S SLR GAKIKREGK T   ADI + RTS+    TQ+NA    K+EWP  ++K W ++ K  +EYDAFK F +RL  +GG+ Y+  KTD TD T+ +GSGFS+E+ SP +  +PE  +    +H   +  S + K+E++P +E    YRS++D  Y I LD    LSLK    +R+DSTP   K
Sbjct:   88 EPDYGYLGYVPGGNYVHIDYWLGDAKWDSSIELGINGQTGNTDSLSLRSGAKIKREGKATKTIADIIYARTSNDGVPTQDNALSNLKIEWPF-VNKRWHVYAKNGMEYDAFKDFGLRLWVSGGMGYEVVKTDDTDLTVELGSGFSKEFDSPDEEYVPEGAMTIFFDHNFNKWHSLEGKYEYYPEWEQFGEYRSISDIGYKILLDDAANLSLKFGVINRFDSTPGANK 313          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94637.21837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V8V3N3_9BACT3.330e-167100.00Uncharacterized protein n=1 Tax=Bremerella alba Ta... [more]
A0A518CDM1_9BACT7.870e-15985.99Uncharacterized protein n=2 Tax=Bremerella volcani... [more]
A0A2S8F7T5_9BACT9.480e-15888.66Uncharacterized protein n=1 Tax=Blastopirellula ma... [more]
A0A2S8GKC3_9BACT6.190e-13377.29Uncharacterized protein n=2 Tax=Blastopirellula ma... [more]
A0A2S8FP56_9BACT1.630e-12773.36Uncharacterized protein n=2 Tax=Blastopirellula ma... [more]
A0A368KRW2_9BACT1.950e-12771.31DUF481 domain-containing protein n=2 Tax=Blastopir... [more]
UPI001CCC47A42.620e-12479.34DUF481 domain-containing protein n=1 Tax=Bremerell... [more]
A0A2S8G6F7_9BACT4.080e-12473.13Uncharacterized protein n=1 Tax=Blastopirellula ma... [more]
UPI001E4968C11.500e-6749.12DUF481 domain-containing protein n=1 Tax=unclassif... [more]
A0A5C5V2J5_9BACT1.800e-6648.90Uncharacterized protein n=1 Tax=Blastopirellula re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94637contigM-pyrifera_M_contig94637:1..738 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score151.0
Seed ortholog evalue7.3e-34
Seed eggNOG ortholog243090.RB2051
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function, DUF481
EggNOG OGs2J024@203682,COG3137@1,COG3137@2
COG Functional cat.M
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size738
Cds size738
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816859.9691124-CDS-M-pyrifera_M_contig94637:0..7381622816859.9691124-CDS-M-pyrifera_M_contig94637:0..738Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94637 1..738 -
1692278220.9131367-CDS-M-pyrifera_M_contig94637:0..7381692278220.9131367-CDS-M-pyrifera_M_contig94637:0..738Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94637 1..738 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94637.21837.1prot_M-pyrifera_M_contig94637.21837.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94637 1..738 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94637.21837.1

>prot_M-pyrifera_M_contig94637.21837.1 ID=prot_M-pyrifera_M_contig94637.21837.1|Name=mRNA_M-pyrifera_M_contig94637.21837.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
EIEKPKETKQEEEPEEEEDTYGYFEYVPYGQYYHVDYWLGEAIWKNSAEL
GLNGQTGNTESNSLRVGAKIKREGKGTIFSADIRHLRTSDKDGLTQNNAY
VKHKLEWPLKLHKNWSLFEKTDIEYDAFKAFDMRLVFNGGVSYKPYKTDA
TDWTLSVGSGFSQEYGSPQKGIIPEATLGSELNHQLTEKQSFQLKFEFFP
AFEADQGYRSVTDASYTIALDHGLSLKISAEDRYDSTPNDRKRNDL
back to top

mRNA from alignment at M-pyrifera_M_contig94637:1..738-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94637.21837.1 ID=mRNA_M-pyrifera_M_contig94637.21837.1|Name=mRNA_M-pyrifera_M_contig94637.21837.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig94637:1..738- (Macrocystis pyrifera P11B4 male)
GAGATAGAGAAACCGAAAGAGACCAAGCAGGAAGAGGAGCCGGAGGAAGA GGAAGATACGTATGGATATTTCGAATATGTTCCGTACGGACAGTACTACC ATGTCGACTATTGGCTAGGTGAGGCAATCTGGAAAAACAGTGCAGAGCTA GGCTTAAATGGGCAAACAGGTAATACCGAATCTAACAGTTTGCGTGTCGG CGCTAAAATTAAACGCGAAGGGAAAGGGACGATCTTTTCCGCAGATATTC GCCATCTTCGAACGAGCGACAAGGACGGTCTCACGCAGAACAACGCCTAC GTGAAACATAAGTTGGAATGGCCACTGAAGCTTCATAAGAATTGGTCCTT GTTTGAAAAAACGGACATCGAATACGACGCATTCAAAGCGTTCGATATGC GGTTGGTTTTCAACGGCGGTGTGAGTTACAAGCCGTATAAGACCGATGCA ACAGATTGGACGTTGTCCGTCGGTTCTGGTTTTTCACAGGAATACGGCAG TCCTCAGAAGGGGATTATTCCGGAAGCGACGCTTGGATCGGAATTAAACC ATCAACTTACCGAGAAACAGTCATTTCAGCTCAAATTTGAATTCTTCCCT GCATTTGAAGCCGACCAGGGCTACCGCAGCGTGACCGATGCAAGCTATAC GATAGCTTTGGATCATGGACTTTCGTTGAAGATCAGCGCTGAAGATCGCT ACGACAGTACCCCCAACGATCGCAAAAGAAATGACTTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig94637:1..738-

>mRNA_M-pyrifera_M_contig94637.21837.1 ID=mRNA_M-pyrifera_M_contig94637.21837.1|Name=mRNA_M-pyrifera_M_contig94637.21837.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1476bp|location=Sequence derived from alignment at M-pyrifera_M_contig94637:1..738- (Macrocystis pyrifera P11B4 male)
GAGATAGAGAAACCGAAAGAGACCAAGCAGGAAGAGGAGCCGGAGGAAGA
GGAAGATACGTATGGATATTTCGAATATGTTCCGTACGGACAGTACTACC
ATGTCGACTATTGGCTAGGTGAGGCAATCTGGAAAAACAGTGCAGAGCTA
GGCTTAAATGGGCAAACAGGTAATACCGAATCTAACAGTTTGCGTGTCGG
CGCTAAAATTAAACGCGAAGGGAAAGGGACGATCTTTTCCGCAGATATTC
GCCATCTTCGAACGAGCGACAAGGACGGTCTCACGCAGAACAACGCCTAC
GTGAAACATAAGTTGGAATGGCCACTGAAGCTTCATAAGAATTGGTCCTT
GTTTGAAAAAACGGACATCGAATACGACGCATTCAAAGCGTTCGATATGC
GGTTGGTTTTCAACGGCGGTGTGAGTTACAAGCCGTATAAGACCGATGCA
ACAGATTGGACGTTGTCCGTCGGTTCTGGTTTTTCACAGGAATACGGCAG
TCCTCAGAAGGGGATTATTCCGGAAGCGACGCTTGGATCGGAATTAAACC
ATCAACTTACCGAGAAACAGTCATTTCAGCTCAAATTTGAATTCTTCCCT
GCATTTGAAGCCGACCAGGGCTACCGCAGCGTGACCGATGCAAGCTATAC
GATAGCTTTGGATCATGGACTTTCGTTGAAGATCAGCGCTGAAGATCGCT
ACGACAGTACCCCCAACGATCGCAAAAGAAATGACTTGGAGATAGAGAAA
CCGAAAGAGACCAAGCAGGAAGAGGAGCCGGAGGAAGAGGAAGATACGTA
TGGATATTTCGAATATGTTCCGTACGGACAGTACTACCATGTCGACTATT
GGCTAGGTGAGGCAATCTGGAAAAACAGTGCAGAGCTAGGCTTAAATGGG
CAAACAGGTAATACCGAATCTAACAGTTTGCGTGTCGGCGCTAAAATTAA
ACGCGAAGGGAAAGGGACGATCTTTTCCGCAGATATTCGCCATCTTCGAA
CGAGCGACAAGGACGGTCTCACGCAGAACAACGCCTACGTGAAACATAAG
TTGGAATGGCCACTGAAGCTTCATAAGAATTGGTCCTTGTTTGAAAAAAC
GGACATCGAATACGACGCATTCAAAGCGTTCGATATGCGGTTGGTTTTCA
ACGGCGGTGTGAGTTACAAGCCGTATAAGACCGATGCAACAGATTGGACG
TTGTCCGTCGGTTCTGGTTTTTCACAGGAATACGGCAGTCCTCAGAAGGG
GATTATTCCGGAAGCGACGCTTGGATCGGAATTAAACCATCAACTTACCG
AGAAACAGTCATTTCAGCTCAAATTTGAATTCTTCCCTGCATTTGAAGCC
GACCAGGGCTACCGCAGCGTGACCGATGCAAGCTATACGATAGCTTTGGA
TCATGGACTTTCGTTGAAGATCAGCGCTGAAGATCGCTACGACAGTACCC
CCAACGATCGCAAAAGAAATGACTTG
back to top