mRNA_M-pyrifera_M_contig94467.21806.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: A0A455V503_9GAMM (Uncharacterized protein n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A455V503_9GAMM) HSP 1 Score: 320 bits (820), Expect = 1.650e-106 Identity = 227/242 (93.80%), Postives = 230/242 (95.04%), Query Frame = 1 Query: 13 LLVVVAYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 LL+VVAYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVR NARTVLSDASDMA GTQELSSRTEQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTESM QMEAKM AIS+SANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIR LIDMSVSHSKEG +IVKAAAERM EIR Sbjct: 2 LLLVVAYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRTNARTVLSDASDMAAGTQELSSRTEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTESMNQMEAKMEAISDSANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRELIDMSVSHSKEGGEIVKAAAERMKEIR 243
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: A0A651D8V1_HALSX (Methyl-accepting chemotaxis protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A651D8V1_HALSX) HSP 1 Score: 330 bits (847), Expect = 1.730e-106 Identity = 228/237 (96.20%), Postives = 233/237 (98.31%), Query Frame = 1 Query: 28 AYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 A+AARR+LAPIK TASAMADIA+GKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVL+DASDMADGTQELSSRTEQAAAN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSV+HSKEG DIVKAAAERM EIR Sbjct: 307 AFAARRALAPIKQTASAMADIAQGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLADASDMADGTQELSSRTEQAAANLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVTHSKEGGDIVKAAAERMQEIR 543
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: G4F7B5_9GAMM (Methyl-accepting chemotaxis sensory transducer n=29 Tax=root TaxID=1 RepID=G4F7B5_9GAMM) HSP 1 Score: 328 bits (841), Expect = 1.440e-105 Identity = 228/237 (96.20%), Postives = 232/237 (97.89%), Query Frame = 1 Query: 28 AYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 AYAARRSLAPIKHTA+AMADIA+GKGDLTRRLEAKT DEIGDLAHGFNAFVERMQ TLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESM QMEAKMAAIS+SANKIS+IIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEG DIVKAAAERM EIR Sbjct: 307 AYAARRSLAPIKHTAAAMADIAQGKGDLTRRLEAKTNDEIGDLAHGFNAFVERMQLTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMNQMEAKMAAISDSANKISDIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGGDIVKAAAERMQEIR 543
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: UPI001CBA1515 (methyl-accepting chemotaxis protein n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001CBA1515) HSP 1 Score: 327 bits (838), Expect = 3.650e-105 Identity = 225/237 (94.94%), Postives = 231/237 (97.47%), Query Frame = 1 Query: 28 AYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 AYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAK+QDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMA+GT ELSSRTEQAAAN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESM QMEAKMAAIS+SANKIS+IIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHS+EG DIVK AAERM+EIR Sbjct: 307 AYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKSQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMANGTHELSSRTEQAAANLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMNQMEAKMAAISDSANKISDIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSREGGDIVKEAAERMNEIR 543
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: A0A7Y6V949_9GAMM (HAMP domain-containing protein n=1 Tax=Halomonas maris TaxID=2729617 RepID=A0A7Y6V949_9GAMM) HSP 1 Score: 327 bits (837), Expect = 5.150e-105 Identity = 227/237 (95.78%), Postives = 233/237 (98.31%), Query Frame = 1 Query: 28 AYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 A+AARR+LAPIK TA+AMADIA+GKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESM QMEAKMAAIS+SANKIS+IIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEG DIVKAAAERM EIR Sbjct: 307 AFAARRALAPIKQTANAMADIAQGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMNQMEAKMAAISDSANKISDIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGGDIVKAAAERMQEIR 543
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: A0A3S0Y8X5_9GAMM (Methyl-accepting chemotaxis protein n=4 Tax=Halomonas TaxID=2745 RepID=A0A3S0Y8X5_9GAMM) HSP 1 Score: 276 bits (706), Expect = 1.700e-85 Identity = 172/236 (72.88%), Postives = 190/236 (80.51%), Query Frame = 1 Query: 28 AYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEI 735 AYAARRSLAPIKHTA+AMADIA+GKGDLTRRLE K+QDEIGDLA GFNAFVERMQ+TLQEVR NA+TVL+ ASDMADGT EL XXXXXXXXXX RGTESMTQME+KM AISES+NKIS+IIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVA+EVRTLASRSA+AA DIRALID+SV+H+KEG+ IVK+AA++M EI Sbjct: 308 AYAARRSLAPIKHTANAMADIAQGKGDLTRRLEVKSQDEIGDLARGFNAFVERMQATLQEVRHNAQTVLAGASDMADGTHELXXXXXXXXXXXXXXXXXXXXIHSTVAHTSQASEQANGLAIEAAGASKRGTESMTQMESKMGAISESSNKISDIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVANEVRTLASRSATAAQDIRALIDVSVNHAKEGNHIVKSAAQQMQEI 543
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: A0A0X8HDB6_9GAMM (Methyl-accepting chemotaxis protein I n=2 Tax=Halomonas TaxID=2745 RepID=A0A0X8HDB6_9GAMM) HSP 1 Score: 276 bits (705), Expect = 2.790e-85 Identity = 174/246 (70.73%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 1 LLVILLVVVAYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 +L++LLV+V ++AR++LAPIK TA AMADIA+GKGDLTRRL A +QDE+G+LA FN FVERMQ TLQEVR NARTVL+ ASDMADGTQELSSRTEQAAANXXXXXXXXXXX RG E+MT+M+AKMA+I SANKIS+IIGLIDSIAFQTNILALNASVEAARAGE GRGFAVVA EVR LASRSA AA DIR LID SV H++EGS IVK AAERM E+R Sbjct: 299 ILLVLLVIVGFSARKALAPIKQTAQAMADIAQGKGDLTRRLTAHSQDEVGELAVQFNGFVERMQRTLQEVRGNARTVLAGASDMADGTQELSSRTEQAAANXXXXXXXXXXXHSTVSHTAQASEQANGLATNAAGVAERGNEAMTEMQAKMASIDASANKISDIIGLIDSIAFQTNILALNASVEAARAGEHGRGFAVVAQEVRNLASRSADAAKDIRGLIDTSVKHTQEGSQIVKGAAERMQELR 544
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: A0A2N7U0Z9_9GAMM (Methyl-accepting chemotaxis protein n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7U0Z9_9GAMM) HSP 1 Score: 267 bits (682), Expect = 7.090e-82 Identity = 169/245 (68.98%), Postives = 189/245 (77.14%), Query Frame = 1 Query: 4 LVILLVVVAYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 LV+LL + AAR++LAPIK TA AMADIA+GKGDLTRRL A + DE+G+LA FN FVERMQ TLQEVR +ARTVL+ ASDMADGTQELSSRTEQAAANXXXXXXXXXX RG+++MT+M+AKMAAI ESANKISNIIGLIDSIAFQTNILALNASVEAARAGE GRGFAVVA EVR LASRSA AA DIR LID SV H++EGS IV+ A R+ E+R Sbjct: 300 LVVLLAIAGLAARKALAPIKQTAHAMADIAQGKGDLTRRLTAHSHDEVGELAIQFNGFVERMQHTLQEVRGSARTVLAGASDMADGTQELSSRTEQAAANXXXXXXXXXXIHSTVAHTAQASEQANSLATNAAGVAERGSDAMTEMQAKMAAIDESANKISNIIGLIDSIAFQTNILALNASVEAARAGEHGRGFAVVAQEVRNLASRSADAAKDIRGLIDTSVKHTQEGSQIVQGVANRIQELR 544
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: A0A2C9ZQB1_9GAMM (Chemotaxis protein n=7 Tax=Halomonas TaxID=2745 RepID=A0A2C9ZQB1_9GAMM) HSP 1 Score: 262 bits (669), Expect = 5.560e-80 Identity = 166/245 (67.76%), Postives = 189/245 (77.14%), Query Frame = 1 Query: 4 LVILLVVVAYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 L +LL +VA +AR+ L+PI+ T AMADIA+GKGDLT+RL+ +QDE+G LA FNAFVERMQ TL +VR+NARTVL+ A D+ADGTQELSSRTEQAAAN XXXXXXXXXXX RG E+MTQM +KMAAI ESANKISNIIGLIDSIAFQTNILALNASVEAARAGE GRGFAVVA EVR LASRS+ AA DIR LID SV H++EGS+IV+A ERM E+R Sbjct: 300 LALLLTIVAISARKVLSPIRRTTLAMADIAQGKGDLTQRLQVDSQDEVGQLALQFNAFVERMQKTLLQVRENARTVLAGAGDIADGTQELSSRTEQAAANLXXXXXXXXXXXSTVSHTAQASEQANGLAVNAASVAERGNEAMTQMRSKMAAIDESANKISNIIGLIDSIAFQTNILALNASVEAARAGEHGRGFAVVAQEVRNLASRSSDAAKDIRGLIDTSVKHTQEGSEIVQAVVERMMELR 544
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Match: A0A7V7G4D0_9GAMM (HAMP domain-containing protein n=1 Tax=Halomonas pellis TaxID=2606936 RepID=A0A7V7G4D0_9GAMM) HSP 1 Score: 246 bits (629), Expect = 3.670e-74 Identity = 156/245 (63.67%), Postives = 182/245 (74.29%), Query Frame = 1 Query: 4 LVILLVVVAYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGDLAHGFNAFVERMQSTLQEVRQNARTVLSDASDMADGTQELSSRTEQAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTESMTQMEAKMAAISESANKISNIIGLIDSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRTLASRSASAAHDIRALIDMSVSHSKEGSDIVKAAAERMSEIR 738 L +LL +V +AR+ LAPI+ T AMADIA+GKGDLT+RL+ + DE+G+LA FNAFVERMQ+TL +VR+NAR VL+ A D+ADGT+ELSSRTEQAAAN XXXXXXXXX R ++MT+M KMAAI ESANKISNIIGLIDSIAFQTNILALNASVEAARAGE GRGFAVVA EVR LASRS+ AA DIR LID SV H++EG+ IV+ ERM E+R Sbjct: 300 LALLLGIVTVSARKVLAPIRRTTLAMADIAQGKGDLTQRLKVDSHDEVGELAVQFNAFVERMQNTLLQVRENARMVLAGAGDIADGTRELSSRTEQAAANLXXXXXXXXXIHSTVAHTAQASEQANGLAVTAAGVAERSNDAMTEMSTKMAAIDESANKISNIIGLIDSIAFQTNILALNASVEAARAGEHGRGFAVVAQEVRNLASRSSDAAKDIRRLIDTSVKHTQEGNTIVQGVVERMEELR 544 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94467.21806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94467.21806.1 >prot_M-pyrifera_M_contig94467.21806.1 ID=prot_M-pyrifera_M_contig94467.21806.1|Name=mRNA_M-pyrifera_M_contig94467.21806.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp LLVILLVVVAYAARRSLAPIKHTASAMADIAKGKGDLTRRLEAKTQDEIGback to top mRNA from alignment at M-pyrifera_M_contig94467:3..740- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94467.21806.1 ID=mRNA_M-pyrifera_M_contig94467.21806.1|Name=mRNA_M-pyrifera_M_contig94467.21806.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig94467:3..740- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94467:3..740- >mRNA_M-pyrifera_M_contig94467.21806.1 ID=mRNA_M-pyrifera_M_contig94467.21806.1|Name=mRNA_M-pyrifera_M_contig94467.21806.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1476bp|location=Sequence derived from alignment at M-pyrifera_M_contig94467:3..740- (Macrocystis pyrifera P11B4 male)back to top |