mRNA_M-pyrifera_M_contig94444.21795.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94444.21795.1
Unique NamemRNA_M-pyrifera_M_contig94444.21795.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A4S8MXK2_DENBC (WD40 repeat-like protein n=2 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MXK2_DENBC)

HSP 1 Score: 113 bits (282), Expect = 6.310e-25
Identity = 141/232 (60.78%), Postives = 179/232 (77.16%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELLDNDD--------KETLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCIL 672
            GT KGHKRGVW V F   +K L +GS DKT+K+W+L DF+C++T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ED TE   EE+EK+R +L+L+EQ+  N++   +YRKA+++AL ++QP R+ S+   ++ + D        +  +D+++  L+  DL+K L+YVR+WN NA+ SLVAQ+    IL
Sbjct:  610 GTCKGHKRGVWTVRFGREEKVLATGSGDKTVKLWNLDDFTCVKTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDCTEEQEEEKEKKRADLVLKEQDFLNYVSLHDYRKAIQLALAMEQPGRLLSLFRNIVSSKDPTASSILGESAVDEVLRTLTGSDLTKLLRYVREWNANAKTSLVAQSVLFAIL 841          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A8C5BAA7_GADMO (Transducin beta like 3 n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5BAA7_GADMO)

HSP 1 Score: 112 bits (280), Expect = 1.170e-24
Identity = 146/233 (62.66%), Postives = 178/233 (76.39%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELLDNDD-KETLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCILSHTKPEAI 696
            G  +GHKRGVW V FSPVD+ L S SAD T K+WSL D+SCL+TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +DVTE    E++ ++E+ IL++QELSN L  K+Y KA+ +A+ LDQP  + ++I  +  ++D ++ L+  +LKL  D     L+Y   WNTNAR  L AQA  + +L+H  PE +
Sbjct:  535 GVFRGHKRGVWAVCFSPVDQVLASSSADGTAKLWSLQDYSCLKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTEVEQAEEQAKQEDQILKQQELSNLLHEKKYLKALGLAISLDQPHTVLTVIRAIRQSEDSRDLLERTLLKLRLDQKESLLRYCAVWNTNARSCLDAQAVLQVLLTHLAPEEL 767          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A067QAB8_9AGAM (Utp13 domain-containing protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067QAB8_9AGAM)

HSP 1 Score: 112 bits (279), Expect = 1.570e-24
Identity = 97/228 (42.54%), Postives = 129/228 (56.58%), Query Frame = 1
Query:    4 TLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELLDNDDKE---TLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCIL 672
            TL GHKRGVW V FSP ++ L SGS DKT++IWSL D+SCLRT                         XXXXXXXXXXXXXXXXXXXXXXX                         N +ED TE    E+E +R E++L+EQ+  N+L   +Y+ A+ +AL ++QP R+ S+  EL  +D  +   T+D ++  LS  DL K ++YVRDWNTNAR++ V Q     ++
Sbjct:  584 TLTGHKRGVWSVKFSPSERVLASGSGDKTVRIWSLEDWSCLRTLEGHGGAVLRVGWLSGEGVGQVVSAXXXXXXXXXXXXXXXXXXXXXXXEDKVWALAISKDQKTVVSGAADSLVNFWEDCTEEQEVEKENKRAEMVLKEQDFLNYLSLHDYKSAISLALAMEQPGRLLSLFRELSSSDPVDSAPTVDQVIRTLSKKDLVKLMRYVRDWNTNARNAGVGQGVLYAVV 811          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A8H5HL46_9AGAR (Utp13 domain-containing protein n=1 Tax=Tricholomella constricta TaxID=117010 RepID=A0A8H5HL46_9AGAR)

HSP 1 Score: 112 bits (279), Expect = 1.580e-24
Identity = 141/231 (61.04%), Postives = 172/231 (74.46%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELLDND-------DKETLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCIL 672
            GT KGHKRGVW V F   ++ L +GS DKT+K+WSL DFSCL+T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ED TE   EE E  R  L+ +EQ+  N++   +YRKA+++AL ++QP R+ S+   +  ND        + ++D+++  +   DL+K LQ+VRDWNTNA+ S VAQ     I+
Sbjct:  603 GTCKGHKRGVWTVRFGRTERTLATGSGDKTVKLWSLDDFSCLKTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDCTEEQDEENELARANLVQKEQDFQNYISLHDYRKAIQLALAMEQPGRLLSLFRNIQTNDVDTASITGRSSVDEVIRTMEGSDLAKLLQFVRDWNTNAKTSRVAQGVLHAIV 833          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A0D6ENA3_SPOSA (SPOSA6832_03059-mRNA-1:cds (Fragment) n=1 Tax=Sporidiobolus salmonicolor TaxID=5005 RepID=A0A0D6ENA3_SPOSA)

HSP 1 Score: 110 bits (275), Expect = 5.380e-24
Identity = 145/256 (56.64%), Postives = 181/256 (70.70%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEEL----------------LDNDDKETLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCILSHTKPEAITSLPLAKD 720
            GT KGHKRGVW V FSPVD+C+ + S D+TIK+WSL+DF+C++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EDVTET   E+ +++EEL+L+EQ+  N+L  K+Y  A+ +AL +DQP R+  +  E+                L       +D ++  LSP DL + L Y++DWNT +R + VAQ     IL     +A+ +    +D
Sbjct:  582 GTFKGHKRGVWSVKFSPVDQCIATASGDRTIKLWSLADFTCVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVTETEELEKLQEQEELVLKEQDFENYLSIKDYSNAILLALSMDQPRRLLKLFTEVRLSSGSTASSDPVADALSFTGSRHVDAVIRALSPSDLRQLLSYIKDWNTVSRSADVAQGVLHAILKFHDADAVLACLEGRD 837          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A0S7MGX2_9TELE (TBL3 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7MGX2_9TELE)

HSP 1 Score: 106 bits (265), Expect = 9.370e-24
Identity = 139/233 (59.66%), Postives = 174/233 (74.68%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELLD-NDDKETLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCILSHTKPEAI 696
            G  +GH+RG+W V FSPVD+ L S SAD T K+WSL DFSCL+TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    V+ DVT+    E++ ++E+ IL++QELSN L  K+Y KA+ +A+ LDQP  + ++I+ +    D  + ++  +L+L  D     L+Y   WNTNAR+ L A A  + +L+H  PE +
Sbjct:   19 GVFRGHRRGIWSVCFSPVDQILASSSADGTTKLWSLQDFSCLKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNITVWLDVTKVEQAEEQAKQEDQILKQQELSNLLHEKKYLKALGLAISLDQPHTVLTVIKAIRQVEDSSDLMETTLLRLRVDQKESLLRYCVVWNTNARNCLDAHAVLQVLLTHLPPEEL 251          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A369KEF6_HYPMA (Putative U3 small nucleolar RNA-associated protein 13 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369KEF6_HYPMA)

HSP 1 Score: 109 bits (272), Expect = 1.350e-23
Identity = 142/231 (61.47%), Postives = 173/231 (74.89%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELLDNDDKE-------TLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCIL 672
            GT KGHKRGVW V F   ++ L +GS DKT+K+WSL DFSCL+TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D TE    E+E  R E++L+EQE  N+L   +YRKA+++AL ++QP R+ S+   +   D +E       ++D+++  L   DL+K L++ RDWNTNA+ S VAQ     I+
Sbjct:  601 GTCKGHKRGVWTVRFGRTERVLATGSGDKTVKLWSLDDFSCLKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCTEEQEAEKETNRAEMVLKEQEFLNYLSLNDYRKAIQLALAMEQPGRLLSLFRNIQTTDVEENSITGRSSVDEVIRTLGGSDLAKLLRFARDWNTNAKTSRVAQGVLYAIV 831          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A8H5GP71_9AGAR (Utp13 domain-containing protein n=1 Tax=Tetrapyrgos nigripes TaxID=182062 RepID=A0A8H5GP71_9AGAR)

HSP 1 Score: 108 bits (269), Expect = 3.350e-23
Identity = 138/233 (59.23%), Postives = 178/233 (76.39%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELLDNDD---------KETLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCIL 672
            GT KGHKRGVW V F   ++ L +GS DKT+K+W+L DF+C++T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ED TE   +E+EK+R +L+L+EQ+  N++   +YRKA+++AL ++QP R+ S+ + ++ + D            +D+++  ++  DL+K L+YVRDWN NA+ S VAQ+    IL
Sbjct:  579 GTCKGHKRGVWTVRFGREERVLATGSGDKTVKLWNLDDFTCVKTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDCTEEEQKEKEKKRADLVLKEQDFLNYVSIHDYRKAMQLALAMEQPGRLLSLFKNVVTSSDFTASNSVLGDSAIDEVLRTIAGSDLTKLLKYVRDWNANAKTSFVAQSVLFAIL 811          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A5C3ML08_9AGAR (WD40 repeat-like protein n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3ML08_9AGAR)

HSP 1 Score: 108 bits (269), Expect = 3.370e-23
Identity = 138/227 (60.79%), Postives = 174/227 (76.65%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELLDNDD----------KETLDDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQ 651
            GT KGHKRGVW V F   ++ L +GS DKT+K+WSL DFSCL+T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ED TE    E+E +R +++L++Q+  N+L   +Y+KA+++AL + QP R+ S+ + +  + D          + ++D+++  L   DL+K L+YVRDWNTNA++S VAQ
Sbjct:  585 GTCKGHKRGVWTVRFGRTERVLATGSGDKTVKLWSLDDFSCLKTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDCTEDEEAEKEAKRADMVLKDQDFVNYLSLNDYKKAIQLALAMSQPGRLLSLFKNVRSSKDGPSYDSSITGQSSVDEVLRTLGGSDLAKLLRYVRDWNTNAKNSTVAQ 811          
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Match: A0A0D2Q9S8_HYPSF (Utp13 domain-containing protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2Q9S8_HYPSF)

HSP 1 Score: 108 bits (269), Expect = 3.380e-23
Identity = 141/233 (60.52%), Postives = 179/233 (76.82%), Query Frame = 1
Query:    1 GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFEDVTETVAEEQEKQREELILQEQELSNHLRAKEYRKAVRIALRLDQPFRIRSIIEELL---DNDDKETL------DDIVLKLSPDDLSKCLQYVRDWNTNARHSLVAQAFFRCIL 672
            GT KGHKRGVW V F   ++ L +GS DKT+K+WSL D+SCLRT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +ED TE    E+E +R E  L++Q+  N+L  ++Y++A+++AL + QP R+ S+ +E+    ++DD  +L      D+I+  LS  +L+K L+++RDWNTNA+ S+VAQ     I+
Sbjct:  601 GTCKGHKRGVWSVRFGRAERVLATGSGDKTVKLWSLDDYSCLRTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEDCTEEDQAEKETKRTESALKDQDFLNYLSLRDYKRAIQLALAMSQPGRLLSLFKEIASSEEDDDSPSLTGNASVDEIIRTLSGPELAKLLRFIRDWNTNAKTSVVAQKVLLAIM 833          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94444.21795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S8MXK2_DENBC6.310e-2560.78WD40 repeat-like protein n=2 Tax=Dendrothele bispo... [more]
A0A8C5BAA7_GADMO1.170e-2462.66Transducin beta like 3 n=2 Tax=Gadus morhua TaxID=... [more]
A0A067QAB8_9AGAM1.570e-2442.54Utp13 domain-containing protein n=1 Tax=Jaapia arg... [more]
A0A8H5HL46_9AGAR1.580e-2461.04Utp13 domain-containing protein n=1 Tax=Tricholome... [more]
A0A0D6ENA3_SPOSA5.380e-2456.64SPOSA6832_03059-mRNA-1:cds (Fragment) n=1 Tax=Spor... [more]
A0A0S7MGX2_9TELE9.370e-2459.66TBL3 (Fragment) n=1 Tax=Poeciliopsis prolifica Tax... [more]
A0A369KEF6_HYPMA1.350e-2361.47Putative U3 small nucleolar RNA-associated protein... [more]
A0A8H5GP71_9AGAR3.350e-2359.23Utp13 domain-containing protein n=1 Tax=Tetrapyrgo... [more]
A0A5C3ML08_9AGAR3.370e-2360.79WD40 repeat-like protein n=1 Tax=Crucibulum laeve ... [more]
A0A0D2Q9S8_HYPSF3.380e-2360.52Utp13 domain-containing protein n=1 Tax=Hypholoma ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94444contigM-pyrifera_M_contig94444:3..725 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score105.9
Seed ortholog evalue2.6e-20
Seed eggNOG ortholog5346.XP_001829201.1
Preferred nameutp13
KEGG koko:K14555
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034388,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.Utp13 specific WD40 associated domain
EggNOG OGs224UQ@155619,38BUJ@33154,3NUNT@4751,3UYZJ@5204,3W3Z4@5338,KOG0319@1,KOG0319@2759
COG Functional cat.A
Best tax levelAgaricales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons1
Model size723
Cds size723
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816858.0192943-CDS-M-pyrifera_M_contig94444:2..7251622816858.0192943-CDS-M-pyrifera_M_contig94444:2..725Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94444 3..725 +
1692278219.7768133-CDS-M-pyrifera_M_contig94444:2..7251692278219.7768133-CDS-M-pyrifera_M_contig94444:2..725Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94444 3..725 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94444.21795.1prot_M-pyrifera_M_contig94444.21795.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94444 3..725 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94444.21795.1

>prot_M-pyrifera_M_contig94444.21795.1 ID=prot_M-pyrifera_M_contig94444.21795.1|Name=mRNA_M-pyrifera_M_contig94444.21795.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
GTLKGHKRGVWCVNFSPVDKCLVSGSADKTIKIWSLSDFSCLRTLEGHTG
SVLSANFLSMGMQLLTSGSDGLLKLWTIRTSECVNTFEKHFDRVWATTVL
RDGEEILSAGADSILNVFEDVTETVAEEQEKQREELILQEQELSNHLRAK
EYRKAVRIALRLDQPFRIRSIIEELLDNDDKETLDDIVLKLSPDDLSKCL
QYVRDWNTNARHSLVAQAFFRCILSHTKPEAITSLPLAKDV
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mRNA from alignment at M-pyrifera_M_contig94444:3..725+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94444.21795.1 ID=mRNA_M-pyrifera_M_contig94444.21795.1|Name=mRNA_M-pyrifera_M_contig94444.21795.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig94444:3..725+ (Macrocystis pyrifera P11B4 male)
GGTACGCTGAAGGGCCACAAGAGGGGAGTGTGGTGTGTGAACTTCTCGCC GGTGGACAAGTGCCTTGTCTCGGGCTCTGCGGACAAAACCATCAAGATCT GGTCCCTCTCCGACTTCTCTTGCCTCCGCACCCTCGAGGGCCACACTGGC TCTGTGCTGAGCGCCAACTTCCTCAGCATGGGCATGCAGTTGCTCACCTC TGGCTCGGATGGCCTCCTCAAGCTGTGGACCATTAGGACGAGCGAATGTG TGAACACCTTTGAGAAGCACTTTGACAGAGTGTGGGCCACGACAGTGCTG AGGGACGGAGAAGAAATCCTCAGCGCTGGCGCTGACTCCATCCTCAACGT TTTCGAGGATGTGACAGAGACTGTGGCTGAAGAGCAGGAGAAACAGAGGG AGGAGCTCATTCTCCAGGAGCAGGAGCTGAGCAACCACCTGAGGGCCAAG GAATACCGCAAGGCAGTGAGGATTGCCCTCAGGCTCGACCAGCCCTTCAG AATCCGCTCCATCATCGAGGAGCTCCTCGACAACGACGACAAGGAGACGC TCGACGACATTGTCCTCAAGCTCTCGCCCGACGATCTCTCCAAGTGCCTT CAGTACGTGCGCGACTGGAACACCAACGCCCGCCACAGCCTCGTCGCCCA GGCCTTCTTCCGCTGCATTCTCAGCCACACCAAGCCCGAGGCCATCACCT CCCTGCCCCTCGCCAAAGACGTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig94444:3..725+

>mRNA_M-pyrifera_M_contig94444.21795.1 ID=mRNA_M-pyrifera_M_contig94444.21795.1|Name=mRNA_M-pyrifera_M_contig94444.21795.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig94444:3..725+ (Macrocystis pyrifera P11B4 male)
GGTACGCTGAAGGGCCACAAGAGGGGAGTGTGGTGTGTGAACTTCTCGCC
GGTGGACAAGTGCCTTGTCTCGGGCTCTGCGGACAAAACCATCAAGATCT
GGTCCCTCTCCGACTTCTCTTGCCTCCGCACCCTCGAGGGCCACACTGGC
TCTGTGCTGAGCGCCAACTTCCTCAGCATGGGCATGCAGTTGCTCACCTC
TGGCTCGGATGGCCTCCTCAAGCTGTGGACCATTAGGACGAGCGAATGTG
TGAACACCTTTGAGAAGCACTTTGACAGAGTGTGGGCCACGACAGTGCTG
AGGGACGGAGAAGAAATCCTCAGCGCTGGCGCTGACTCCATCCTCAACGT
TTTCGAGGATGTGACAGAGACTGTGGCTGAAGAGCAGGAGAAACAGAGGG
AGGAGCTCATTCTCCAGGAGCAGGAGCTGAGCAACCACCTGAGGGCCAAG
GAATACCGCAAGGCAGTGAGGATTGCCCTCAGGCTCGACCAGCCCTTCAG
AATCCGCTCCATCATCGAGGAGCTCCTCGACAACGACGACAAGGAGACGC
TCGACGACATTGTCCTCAAGCTCTCGCCCGACGATCTCTCCAAGTGCCTT
CAGTACGTGCGCGACTGGAACACCAACGCCCGCCACAGCCTCGTCGCCCA
GGCCTTCTTCCGCTGCATTCTCAGCCACACCAAGCCCGAGGCCATCACCT
CCCTGCCCCTCGCCAAAGACGTAGGTACGCTGAAGGGCCACAAGAGGGGA
GTGTGGTGTGTGAACTTCTCGCCGGTGGACAAGTGCCTTGTCTCGGGCTC
TGCGGACAAAACCATCAAGATCTGGTCCCTCTCCGACTTCTCTTGCCTCC
GCACCCTCGAGGGCCACACTGGCTCTGTGCTGAGCGCCAACTTCCTCAGC
ATGGGCATGCAGTTGCTCACCTCTGGCTCGGATGGCCTCCTCAAGCTGTG
GACCATTAGGACGAGCGAATGTGTGAACACCTTTGAGAAGCACTTTGACA
GAGTGTGGGCCACGACAGTGCTGAGGGACGGAGAAGAAATCCTCAGCGCT
GGCGCTGACTCCATCCTCAACGTTTTCGAGGATGTGACAGAGACTGTGGC
TGAAGAGCAGGAGAAACAGAGGGAGGAGCTCATTCTCCAGGAGCAGGAGC
TGAGCAACCACCTGAGGGCCAAGGAATACCGCAAGGCAGTGAGGATTGCC
CTCAGGCTCGACCAGCCCTTCAGAATCCGCTCCATCATCGAGGAGCTCCT
CGACAACGACGACAAGGAGACGCTCGACGACATTGTCCTCAAGCTCTCGC
CCGACGATCTCTCCAAGTGCCTTCAGTACGTGCGCGACTGGAACACCAAC
GCCCGCCACAGCCTCGTCGCCCAGGCCTTCTTCCGCTGCATTCTCAGCCA
CACCAAGCCCGAGGCCATCACCTCCCTGCCCCTCGCCAAAGACGTA
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