mRNA_M-pyrifera_M_contig94436.21791.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94436.21791.1
Unique NamemRNA_M-pyrifera_M_contig94436.21791.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: A0A816D1C4_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A816D1C4_ADIRI)

HSP 1 Score: 105 bits (263), Expect = 7.470e-25
Identity = 58/150 (38.67%), Postives = 80/150 (53.33%), Query Frame = 1
Query:   43 SSILSNCIYLQDAEVTLEGVRIYGTPWNATASAFALGRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAVQVGTTLCVNSAMKAGHDA 492
            S +L+NC YLQD  V +EG+ IYG+PW  T S         +  ++ IP+ IDVL+TH+P   I DLAY          ++   +  C +C    H  YGH G   L+  VL R++P+V  FGHVHDD G      TL +N+A    H +
Sbjct:  112 SKLLTNCKYLQDELVEVEGITIYGSPWPFTQSY--------RSKWSSIPDHIDVLMTHVPPQYILDLAYQP--------KKAPITEPCAMCDDKVHGSYGHWGSRSLKRAVLERIQPRVHCFGHVHDDPGYKYENNTLFINAAANLTHQS 245          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: D7FHZ7_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ7_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.880e-23
Identity = 55/146 (37.67%), Postives = 84/146 (57.53%), Query Frame = 1
Query:   37 EISSILSNCIYLQDAEVTLEGVRIYGTPW-NATASAFALGRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAVQVGTTLCVNSA 471
            +I   +SN  YL+D+E T+EG++ YGTPW N++   F+      + V++ IPEG+D+L+THMP +   DLA+       G   +   +  C VC    H  + H G   L D V   +KPKV +FGHVH+ HG ++   T+ +N+A
Sbjct:   72 QIQRRISNATYLEDSETTVEGLKFYGTPWTNSSHMGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDR-----GSHAK---ADPCPVCGET-HRSFAHWGSWSLTDRVAE-LKPKVHVFGHVHNSHGIIRKDDTVYINAA 207          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: A0A6H5JJZ4_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ4_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.180e-22
Identity = 55/146 (37.67%), Postives = 84/146 (57.53%), Query Frame = 1
Query:   37 EISSILSNCIYLQDAEVTLEGVRIYGTPW-NATASAFALGRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAVQVGTTLCVNSA 471
            +I   +SN  YL+D+E T+EG++ YGTPW N++   F+      + V++ IPEG+D+L+THMP +   DLA+       G   +   +  C VC    H  + H G   L D V   +KPKV +FGHVH+ HG ++   T+ +N+A
Sbjct:  168 QIQRRISNATYLEDSETTVEGLKFYGTPWTNSSHMGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDR-----GSNAK---ADPCPVCGET-HRSFAHWGSWSLTDRVAE-LKPKVHVFGHVHNSHGIIRKDETVYINAA 303          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: UPI001458B0D0 (UPF0046 protein C25E10.12-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458B0D0)

HSP 1 Score: 98.6 bits (244), Expect = 4.010e-22
Identity = 60/153 (39.22%), Postives = 79/153 (51.63%), Query Frame = 1
Query:   37 EISSILSNCIYLQDAEVTLEGVRIYGTPWNA-------TASAFALGRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAVQVGTTLCVNSAM 474
            +I  IL    YLQD+ V +EG+  YG+PW A        A     G+ +    +  IP G DVLVTHMP +GI D+   +    F L Q R  +  C VCS+  H    H GC  LR  +LNRVKPK+  FGH+H   G   +  T   N+A+
Sbjct:  101 DIQKILPEVTYLQDSGVNIEGINFYGSPWTAYKWKSYNRAFVRKWGKFEHH--WDDIPTGTDVLVTHMPPHGIRDMGRQD----FSLFQNRRDT--CNVCSQT-HEGRCHLGCPKLRHAILNRVKPKLHCFGHLHGSAGLHVIDETTFSNAAL 244          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: A0A7I8WCW0_9ANNE (Hypothetical protein n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8WCW0_9ANNE)

HSP 1 Score: 97.8 bits (242), Expect = 8.700e-22
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 1
Query:   46 SILSNCIYLQDAEVTLEGVRIYGTPWN-----ATASAFALGRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAVQVGTTLCVNSAMKAGHDANVVE 504
            S+++ C YL D  VT+EG+RIYG+PWN     + A AF +  +  K  +  I +  D++VTH P + + DLA  N  I    + + L S +C +CS+ +H    H G   LR  +  ++KP + LFGHVH+  GA      L  NSA+K      V++
Sbjct:  102 SLITECQYLIDESVTIEGIRIYGSPWNKWRYTSFARAFTIKNIKAK--WELIDQDSDIVVTHQPPFNLLDLASYNHYIP-NFLVKLLSSSRCEICSQ-YHPGRNHWGSKSLRRILTEKIKPTLHLFGHVHECFGATTNDKILFCNSAIKQRGHPQVID 255          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: A0A817W8Q9_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817W8Q9_9BILA)

HSP 1 Score: 94.0 bits (232), Expect = 3.870e-21
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 1
Query:   10 GARRYKSAGEISSILSNCIYLQDAEVTLEGVRIYGTPWNATASAFALGRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHG 432
            G ++Y      S++L+NCIYL+D  + +EG+ IYG+PW              +  +  IP  ID+L+TH+P   I DLA+          ++   +  C +C+   H  YGH G   L  E+  R++P++  FGHVHDD+G
Sbjct:    8 GFQKYSKEEIQSNLLTNCIYLKDELIQVEGITIYGSPWPFNEHY--------RTKWLSIPSNIDILMTHIPPKFILDLAFQP--------KKVASTEPCSMCNNTVHGSYGHWGSKSLIKEIRERIQPRIHCFGHVHDDNG 132          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: A0A817R4F3_9BILA (Hypothetical protein n=6 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817R4F3_9BILA)

HSP 1 Score: 94.4 bits (233), Expect = 1.890e-20
Identity = 48/141 (34.04%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   10 GARRYKSAGEISSILSNCIYLQDAEVTLEGVRIYGTPWNATASAFALGRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHG 432
            G ++Y      S++L+NCIYL+D  + +EG+ IYG+PW+         +   +  +  IP  ID+L+TH+P   I DLA+          ++   +  C +C+   H  YGH G   L  E+  R++P++  FGHVHDD+G
Sbjct:   97 GFQKYSKEEIQSNLLTNCIYLKDELIQVEGITIYGSPWSF--------KEHYRTKWLSIPSNIDILMTHIPPKFILDLAFQP--------KKVASTEPCSMCNDTVHGSYGHWGSKSLIKEIRERIQPRIHCFGHVHDDNG 221          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: A0A821PJ98_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821PJ98_9BILA)

HSP 1 Score: 94.0 bits (232), Expect = 2.450e-20
Identity = 59/159 (37.11%), Postives = 81/159 (50.94%), Query Frame = 1
Query:   10 GARRYKSAGEISSILSNCIYLQDAEVTLEGVRIYGTPWNATASAFALGRLDRKRV-YAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAV--QVGT-TLCVNSAM 474
            G R +      S +L+NCIYL+D  + +EG+ IYG PW            +R R  ++ IP  ID+L+TH P   I DLAY          ++      C +C+   H  YGH G   L  E+  R++P+V  FGHVHDD G    Q G  TL +N+AM
Sbjct:   97 GFRNFSKDDIQSKLLTNCIYLKDELIQVEGISIYGCPWPFN---------ERYRTKWSLIPSHIDILMTHSPPQFILDLAYQP--------KKTPSIEPCSICNNTVHGSYGHWGSRSLIKEIRERIQPRVHCFGHVHDDSGYKYEQNGNGTLFINAAM 238          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: A0A1S3JYP0_LINUN (UPF0046 protein C25E10.12-like isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JYP0_LINUN)

HSP 1 Score: 92.8 bits (229), Expect = 1.020e-19
Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 1
Query:   37 EISSILSNCIYLQDAEVTLEGVRIYGTPWNAT-----ASAFA--LGRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWH----HHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAVQV-----GT--TLCVNSAMKAGHDANVV 501
            EI + + N  YLQD  + +EG++ YG+PW A+     A AF   +  LD K  ++K+P+ IDVLVTHMP  GI D  Y    I  G  +   F   C+ C    H    H++G  G  +L  + L R++PK+ +FGHVH  +G  ++     GT  T C N++M+ GH   VV
Sbjct:  115 EIRNNVKNFTYLQDDWIEIEGLKFYGSPWTASRSSSRADAFTEPIEELDSK--WSKLPDDIDVLVTHMPPLGIRDKEY----IYRGRFKTMSFD-PCKFCESRAHPLSVHYFGSKG--LL--DALKRIRPKIHVFGHVHGTNGVTRLKHNQDGTANTFCSNASME-GHPTPVV 275          
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Match: A0A8C5YS57_MARMA (Metallophosphoesterase domain containing 1 n=3 Tax=Marmotini TaxID=337730 RepID=A0A8C5YS57_MARMA)

HSP 1 Score: 89.7 bits (221), Expect = 1.570e-19
Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 1
Query:   40 ISSILSNCIYLQDAEVTLEGVRIYGTPWNATASAFALGRLDRKRVYAK---IPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSHQCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAVQVGTTLCVNSAM 474
            + S+L+NCIYLQDAEVT+ G RIYG+PW      +       + +  K   IPEG+D+L+TH P  G  D            MQR                     GC  L + V  RV+P++ +FGH+H+ +G +  GTT  VN+++
Sbjct:   26 VQSLLTNCIYLQDAEVTVRGFRIYGSPWQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKK-------MQR--------------------VGCVELLNTVQRRVQPRLHVFGHIHEGYGVMADGTTTYVNASV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94436.21791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A816D1C4_ADIRI7.470e-2538.67Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]
D7FHZ7_ECTSI1.880e-2337.67Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JJZ4_9PHAE1.180e-2237.67Metallophos domain-containing protein n=1 Tax=Ecto... [more]
UPI001458B0D04.010e-2239.22UPF0046 protein C25E10.12-like n=1 Tax=Pecten maxi... [more]
A0A7I8WCW0_9ANNE8.700e-2236.08Hypothetical protein n=1 Tax=Dimorphilus gyrocilia... [more]
A0A817W8Q9_9BILA3.870e-2134.04Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
A0A817R4F3_9BILA1.890e-2034.04Hypothetical protein n=6 Tax=Rotaria sp. Silwood2 ... [more]
A0A821PJ98_9BILA2.450e-2037.11Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 ... [more]
A0A1S3JYP0_LINUN1.020e-1937.57UPF0046 protein C25E10.12-like isoform X1 n=1 Tax=... [more]
A0A8C5YS57_MARMA1.570e-1935.14Metallophosphoesterase domain containing 1 n=3 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94436contigM-pyrifera_M_contig94436:236..742 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score103.6
Seed ortholog evalue9.2e-20
Seed eggNOG ortholog2880.D7FHZ7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Calcineurin-like phosphoesterase
EggNOG OGsKOG3947@1,KOG3947@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size507
Cds size507
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816857.8453348-CDS-M-pyrifera_M_contig94436:235..7421622816857.8453348-CDS-M-pyrifera_M_contig94436:235..742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94436 236..742 -
1692278219.6805506-CDS-M-pyrifera_M_contig94436:235..7421692278219.6805506-CDS-M-pyrifera_M_contig94436:235..742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94436 236..742 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94436.21791.1prot_M-pyrifera_M_contig94436.21791.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94436 236..742 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94436.21791.1

>prot_M-pyrifera_M_contig94436.21791.1 ID=prot_M-pyrifera_M_contig94436.21791.1|Name=mRNA_M-pyrifera_M_contig94436.21791.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
MSTGARRYKSAGEISSILSNCIYLQDAEVTLEGVRIYGTPWNATASAFAL
GRLDRKRVYAKIPEGIDVLVTHMPMYGIADLAYVNWPILFGLMQRRLFSH
QCRVCSRPWHHHYGHSGCDILRDEVLNRVKPKVALFGHVHDDHGAVQVGT
TLCVNSAMKAGHDANVVEL
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mRNA from alignment at M-pyrifera_M_contig94436:236..742-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94436.21791.1 ID=mRNA_M-pyrifera_M_contig94436.21791.1|Name=mRNA_M-pyrifera_M_contig94436.21791.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig94436:236..742- (Macrocystis pyrifera P11B4 male)
ATGTCTACGGGCGCGAGGCGGTACAAAAGTGCTGGAGAGATCTCCAGCAT TCTCAGCAACTGCATTTACCTTCAAGATGCTGAGGTGACGCTTGAGGGTG TTCGGATCTACGGCACTCCCTGGAATGCCACTGCGAGCGCATTCGCTCTG GGAAGATTGGACAGAAAGAGAGTTTACGCCAAGATTCCCGAGGGCATCGA TGTGCTCGTGACACACATGCCCATGTACGGAATAGCAGACCTGGCCTACG TCAACTGGCCCATTCTCTTTGGCCTCATGCAGAGGAGGCTGTTCTCGCAC CAGTGTCGCGTGTGCTCGCGCCCCTGGCACCACCACTACGGCCACTCTGG CTGTGACATTCTCAGAGACGAAGTACTCAACAGAGTGAAGCCCAAGGTGG CCCTCTTTGGCCATGTGCACGACGACCATGGCGCTGTACAGGTGGGCACC ACTCTTTGTGTAAACTCTGCCATGAAGGCCGGCCACGACGCCAACGTTGT CGAACTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig94436:236..742-

>mRNA_M-pyrifera_M_contig94436.21791.1 ID=mRNA_M-pyrifera_M_contig94436.21791.1|Name=mRNA_M-pyrifera_M_contig94436.21791.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig94436:236..742- (Macrocystis pyrifera P11B4 male)
ATGTCTACGGGCGCGAGGCGGTACAAAAGTGCTGGAGAGATCTCCAGCAT
TCTCAGCAACTGCATTTACCTTCAAGATGCTGAGGTGACGCTTGAGGGTG
TTCGGATCTACGGCACTCCCTGGAATGCCACTGCGAGCGCATTCGCTCTG
GGAAGATTGGACAGAAAGAGAGTTTACGCCAAGATTCCCGAGGGCATCGA
TGTGCTCGTGACACACATGCCCATGTACGGAATAGCAGACCTGGCCTACG
TCAACTGGCCCATTCTCTTTGGCCTCATGCAGAGGAGGCTGTTCTCGCAC
CAGTGTCGCGTGTGCTCGCGCCCCTGGCACCACCACTACGGCCACTCTGG
CTGTGACATTCTCAGAGACGAAGTACTCAACAGAGTGAAGCCCAAGGTGG
CCCTCTTTGGCCATGTGCACGACGACCATGGCGCTGTACAGGTGGGCACC
ACTCTTTGTGTAAACTCTGCCATGAAGGCCGGCCACGACGCCAACGTTGT
CGAACTCATGTCTACGGGCGCGAGGCGGTACAAAAGTGCTGGAGAGATCT
CCAGCATTCTCAGCAACTGCATTTACCTTCAAGATGCTGAGGTGACGCTT
GAGGGTGTTCGGATCTACGGCACTCCCTGGAATGCCACTGCGAGCGCATT
CGCTCTGGGAAGATTGGACAGAAAGAGAGTTTACGCCAAGATTCCCGAGG
GCATCGATGTGCTCGTGACACACATGCCCATGTACGGAATAGCAGACCTG
GCCTACGTCAACTGGCCCATTCTCTTTGGCCTCATGCAGAGGAGGCTGTT
CTCGCACCAGTGTCGCGTGTGCTCGCGCCCCTGGCACCACCACTACGGCC
ACTCTGGCTGTGACATTCTCAGAGACGAAGTACTCAACAGAGTGAAGCCC
AAGGTGGCCCTCTTTGGCCATGTGCACGACGACCATGGCGCTGTACAGGT
GGGCACCACTCTTTGTGTAAACTCTGCCATGAAGGCCGGCCACGACGCCA
ACGTTGTCGAACTC
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