mRNA_M-pyrifera_M_contig94435.21790.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94435.21790.1
Unique NamemRNA_M-pyrifera_M_contig94435.21790.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A2H5W0B7_9BACT (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2H5W0B7_9BACT)

HSP 1 Score: 122 bits (306), Expect = 4.750e-28
Identity = 95/260 (36.54%), Postives = 137/260 (52.69%), Query Frame = 1
Query:    7 GIKLENGSRANVVI-------ENVISGNGGDGLELVGVNDETIILGNLIGTDLQGTDAIGNSENGILITDGYDISVGGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPN-------WNSSVERNVIGANLG--AIIIKKKRNRILGNHIGVDVTGTNQIGNLNNGIVIKADS--NIVGDPHDNTTGNIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGIT 732
            GI+L     +N +I        NV+SGNGGDG+E+ G+   T ++GN IG    G   + N  +GI I    +++VGG  +  GN+ISGN  +G+Q+   T        L+I GN+IGV+  G  A+ N   GI L           SS  RNVI  N G   ++++   N++ GN+IGVD  G   +GN   GI +  +S  N++G   +  + N+IS ++ SGI +   S    I  N IGV+A G    GNG DGIT
Sbjct:  583 GIQLFGDGVSNTLIGGTAATDRNVVSGNGGDGIEVRGLARNTQVVGNYIGIAADGRTPLPNGGSGIFIAGADNVTVGGTASGAGNVISGNLRHGLQARGSTG-------LRIQGNFIGVEARGASAVKNGGDGISLVEVINAQIGGVSSSARNVISGNEGHGVMLLRSLANKVQGNYIGVDAEGRQALGNGGAGIQVDLNSPNNLIGGIVEGAS-NVISGNRGSGIFIAPSSPGTQIFGNRIGVNAAGQAALGNGGDGIT 834          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A7C2CFG8_9BACT (Uncharacterized protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C2CFG8_9BACT)

HSP 1 Score: 119 bits (298), Expect = 5.530e-27
Identity = 88/238 (36.97%), Postives = 130/238 (54.62%), Query Frame = 1
Query:   52 NVISGNGGDGLELVGVNDETIILGNLIGTDLQGTDAIGNSENGILITDGYDISVGGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPN-WNSSV------ERNVIGANLG--AIIIKKKRNRILGNHIGVDVTGTNQIGNLNNGIVIKADS--NIVGDPHDNTTGNIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGIT 732
            NVISGNGGDG+E+ G+   T I+GN +G    G   + N  +G+L+    +I+VGGM +  GN+ISGN  +G+Q    T        +++ GN IGVD  G  A+ N   G+LL + +N+ +       RNVI  N G    +++   ++I GN+IG D  G   +GN   G+ +  +S   ++G   +   GN+IS ++ SGI +  G+    I  N IGVDA G    GN  DGIT
Sbjct:  603 NVISGNGGDGIEVRGLARNTQIVGNYVGVAADGRTPLPNGGHGLLLVGTENIAVGGMASGAGNVISGNLRHGLQVRNGTG-------VRVQGNLIGVDARGASAVKNGGDGLLLMDVFNAQIGGASVSARNVISGNEGNGVTLVRSTTSKIQGNYIGTDAEGRRALGNGGAGVHVDLNSPNTLIGGVVEGA-GNVISGNRGSGIFLGAGALGTQIFGNRIGVDAAGRATLGNSGDGIT 832          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: UPI001681F5FF (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Microcoleus sp. FACHB-672 TaxID=2692825 RepID=UPI001681F5FF)

HSP 1 Score: 119 bits (297), Expect = 7.540e-27
Identity = 91/256 (35.55%), Postives = 142/256 (55.47%), Query Frame = 1
Query:    7 GIKLENGSRANVVIENVISGNGGDGLELVGVNDETI--ILGNLIGTDLQGTDAIGNSENGILITDGYDISV-GGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPNWNSSV-------ERNVIGANLGAII---IKKKRNRILGNHIGVDVTGTNQIGNLNNGIVIK--ADSNIVGDPHDNTTGNIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGI 729
            G+++E     NV+  N+++GN  DG+ L+G +  T   ++GNL+GT+  GT AIGN E G+ I  G   ++ GG+ A + NIISGN  +G+    QT   +     Q++GN+IGVD+ GT A+GN   G+ + +  +++        RN+I  N  + I   +      I GN+IG DVTGT  IGN +NGI ++  A +  +G     +  N+IS ++ +GI +   S  N +  NY+G  A G+   GN   GI
Sbjct:  329 GVRIETAD--NVIQNNLVAGNTSDGI-LIGNSSATNNRVIGNLVGTNASGTAAIGNGEVGVFIVQGAANNIIGGVTAAERNIISGNNSWGVG--FQTNATNN----QLLGNFIGVDINGTAALGNGSDGVSVFSAPNNIIGGTVAGSRNIISGNGASGIELPLASPNTLIAGNYIGTDVTGTVTIGNEDNGITVEQYAINTTIGGTTPESR-NLISGNKGNGISL--DSRDNQVLGNYVGTQADGISALGNANRGI 572          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A3N9PI15_9BACT (T9SS C-terminal target domain-containing protein n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3N9PI15_9BACT)

HSP 1 Score: 117 bits (294), Expect = 1.640e-26
Identity = 89/239 (37.24%), Postives = 127/239 (53.14%), Query Frame = 1
Query:   52 NVISGNGGDGLELVGVNDETIILGNLIGTDLQGTDAIGNSENGI-LITDGYDISVGGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPN--------WNSSVERNVIGAN-LGAIIIKKKRNRILGNHIGVDVTGTNQIGNLNNGIVIK--ADSNIVGDPHDNTTGNIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGIT 732
            N+ISGN   G+ L+  N+   ++GN IGT+  G   +GN  +GI ++ D  +  +GG   + GN+ISGN   G++     T         + GN+IG D+TGTVA+ N   GI +           N+   RNVI  N    + +    N + GN IG DVTG   +GN  +G+VI+  A+ N +G     T GNIISA+ Y GI + G +N   IA NYIG D  G+   GNG  G++
Sbjct:  196 NLISGNNEYGIWLLSSNNA--VVGNCIGTNAAGNAGLGNGASGIGIVEDCVNNVIGGSSPNAGNLISGNNFEGMEIGGAHTV--------VQGNFIGTDITGTVAIPNGGCGIFVHGSATHTTIGGNAKWRRNVISGNGFRGVWLNSSNNTVAGNLIGTDVTGAVALGNAGDGVVIEEGAELNTIGGKAKGT-GNIISANGYLGIWLLGSNNL--IAGNYIGTDVNGMAALGNGSGGLS 421          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A1F4TNA6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=candidate division WOR-1 bacterium RIFOXYC2_FULL_41_25 TaxID=1802586 RepID=A0A1F4TNA6_9BACT)

HSP 1 Score: 117 bits (292), Expect = 3.430e-26
Identity = 96/264 (36.36%), Postives = 138/264 (52.27%), Query Frame = 1
Query:    4 EGIKLENGSRANVV------IENVISGNGGDGLELVGVNDE-TIILGNLIGTDLQGTDAIGNSENGI-LITDGYDISVGGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPNWN--------SSVERNVIGAN----LGAIIIKKKRNRILGNHIGVDVTGTNQIGNLNNG--IVIKADSNIVGDPHDNTTGNIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGI 729
            +GI++ NGS  N++        NVISGN   G+ L G N    +I GN IGT+   T A+ N+  GI L ++ +  ++GG  ADD NIISGNG+ GI         D+    +++GNYIG DV GT A+ N   GI +   +        ++  RN+I  N            + N++ GN+IG+DV GT  + NL  G  IV  A  N++G  +     NIIS +   G+++   +N N +  NYIG+D  G  D GNG  GI
Sbjct:  183 KGIEILNGSY-NIIGSSESGRRNVISGNDIVGIFLQGANTAYNVIRGNYIGTERTATSALTNTNGGISLQSNPHHNTIGGTTADDKNIISGNGIVGINI-------DSSNTNEVVGNYIGTDVNGTSAITNEGNGITISGGSLDNNIGDGTAAGRNIISGNNIXXXXXTDTNTRDNKVRGNYIGMDVNGTTALSNLQKGVSIVSGASLNVIGGENAGER-NIISGNNEDGVVINSSAN-NLVIGNYIGLDVNGTTDRGNGWKGI 436          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A7C9PWB8_9CYAN (S8 family serine peptidase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9PWB8_9CYAN)

HSP 1 Score: 114 bits (286), Expect = 2.310e-25
Identity = 89/257 (34.63%), Postives = 133/257 (51.75%), Query Frame = 1
Query:   34 ANVVIENVISGNGGDGLELV-GVNDETIILGNLIGTDLQGTDAIGNSENGILITDGYDISVGGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPN-------WNSSVERNVIGANLG-AIIIK---KKRNRILGNHIGVDVTGTNQIGNLNNGI-VIKADSNIVGDPH-------DNTTG-----NIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGI 729
            +N    N+ISGN  +G+ +         ILGN IGT+++GT+A+GN   GI I +     +GG+     N+ISGN   G++   Q+ K     E QI+GNYIG D TGT  +GN   G+ + N         ++  RN+I +N G  I I+     +N+++ N+IG  + GT ++GN   GI ++    NI+G P        D+ T      NIIS ++  GI +  G+  N +  NY+G D TG    GN   GI
Sbjct: 1780 SNEKTRNLISGNKLNGITISRSTATGNQILGNYIGTNVEGTEALGNRFEGIEIDNAPQNIIGGIAPGSRNVISGNERNGVEILGQSAK-----ENQILGNYIGTDHTGTADLGNIFDGVKIFNAPYNEIGGTTAEARNLISSNKGNGIEIEGAGANKNKVINNYIGTKINGTEELGNFFEGIKIVGGSENIIGGPSPALAPGSDDATEPELYRNIISGNKRQGIAIADGAKLNQVLGNYVGTDLTGQVALGNRWAGI 2031          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A1W9RSH5_9BACT (Dockerin domain-containing protein n=1 Tax=candidate division KSB1 bacterium 4484_87 TaxID=1970772 RepID=A0A1W9RSH5_9BACT)

HSP 1 Score: 114 bits (285), Expect = 2.730e-25
Identity = 88/218 (40.37%), Postives = 122/218 (55.96%), Query Frame = 1
Query:  115 ILGNLIGTDLQGTDAIGNSENGILITDGYDISV-GGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPNW--------NSSVERNVIGANL--GAIIIKKKRNRILGNHIGVDVTGTNQIGNLNNGIVIKADSNIVG--DPHDNTTGNIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGI 729
            I G  +GTD+ GT   GN   GIL+ D    +V GG    DGN+ SGNG  G++  +Q T  D+     ++GNYIG DV+G +A+ N  +GI + ++        N   ERN++  NL  G  +++   + + GN IGVDV GTN I N ++GI I    NI+G  +P D   GN+ISA+   GI V G  + N+I  NYIG D TG   F N  +GI
Sbjct:  162 IKGCYVGTDVTGTQDCGNGFTGILVYDRAKHNVIGGTLLGDGNLASGNGWSGVE--IQGTGADSN---LVIGNYIGTDVSGMLALANDRSGINIWSYAEANIVGGNMPEERNIVSGNLWTGISLLRANYSVVRGNFIGVDVNGTNTIPNGHSGIAISGSYNIIGGNEPGD---GNLISANSV-GIAV-GVDSMNTIIGNYIGTDITGNLPFPNENEGI 369          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A7Y4ULE4_9PROT (Cadherin-like domain-containing protein n=1 Tax=Methylotenera sp. TaxID=2051956 RepID=A0A7Y4ULE4_9PROT)

HSP 1 Score: 113 bits (283), Expect = 5.700e-25
Identity = 93/246 (37.80%), Postives = 130/246 (52.85%), Query Frame = 1
Query:   40 VVIENVISGNGGDGLELVGVN-DETIILGNLIGTDLQGTDAIGNSENGILITDGY-DISVGGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPNWN-------SSVERNVIGANLGAII----IKKKRNRILGNHIGVDVTGTNQIGNLNNGIVIK--ADSNIVGDPHDNTTGNIISASQYSGILVFGGS-NFNSIAYNYIGVDATGVKDFGNGRDGI 729
            V   N+ISGN   G+E+V V  +  ++ GN IGTD+ GT A+GNSE G    +G  + ++GG  A   NIISGN   G+     TT         I GNYIG DVTGTVA+ N+  G+ + + N       +++ERN+I  N  + +         N +LGN+IG D +GT  I N   G+ I   A +N++GD       +I+S +   GI V   S N N I  NY+G++A G     NG  GI
Sbjct:  527 VAARNIISGNNWFGVEMVQVGTNNNLVQGNYIGTDVTGTVALGNSEGGASFWNGAANNTIGGSVAGARNIISGNLNKGVLIGGTTTPTGN----NIKGNYIGTDVTGTVALANATYGVYIQSGNGNTIGGTNALERNIISGNADSGVYITGFDSISNVVLGNYIGTDASGTVAISNGGYGVHIDNGASNNVIGDGVAGAR-SIVSGNADIGIYVADASTNGNKILGNYVGLNAAGNAAISNGSFGI 767          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A3M1W3G4_9BACT (Beta_helix domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1W3G4_9BACT)

HSP 1 Score: 113 bits (282), Expect = 6.480e-25
Identity = 76/214 (35.51%), Postives = 109/214 (50.93%), Query Frame = 1
Query:  121 GNLIGTDLQGTDAIGNSENGILITDGYDISVGGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPNWNSSVERNVIGANLGAII----------IKKKRNRILGNHIGVDVTGTNQIGNLNNGIVIKADSNIVGDPHDNTTGNIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGIT 732
            GN IG D  GT  + N  +G+ ++   +  +GG+     N+ISGN   G+     T         QI+GN IG DVTG VA+ NS +G+++ N + +     +G   G +I                  LGN IG DVTGT  +GN  +G++IKA  N +G P      N+IS +  +G+ +  GS FN +  NYIGVD TG     NG DG++
Sbjct:    1 GNYIGVDASGTQPLPNGGDGVFMSSVRNNIIGGITPGAANVISGNLRNGVSIEAGTNN-------QIVGNLIGTDVTGAVALPNSGSGVMISNGSDATIIGGVGPRAGNVISGNXXXXXXXXXXXXXXXLGNLIGTDVTGTMALGNAGHGVMIKAAENRIGGPVPQAR-NVISGNARAGVYLDAGSAFNDLLGNYIGVDITGANVLPNGGDGVS 206          
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Match: A0A1F3F3L6_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium GWA2_30_7 TaxID=1797313 RepID=A0A1F3F3L6_9BACT)

HSP 1 Score: 112 bits (281), Expect = 9.320e-25
Identity = 96/250 (38.40%), Postives = 138/250 (55.20%), Query Frame = 1
Query:    7 GIKLENGSRANVVIENVISGNGGDGLELVGVNDETIILGNLIGTDLQGTDAIGNSENGILITDGYDISVGGMFADDGNIISGNGLYGIQSFLQTTKPDTLEELQIMGNYIGVDVTGTVAMGNSLAGILLPN-------WNSSVERNVIGANLGAIIIKK----KRNRILGNHIGVDVTGTNQIGNLNNGIVIKA--DSNIVGDPHDNTTGNIISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNG 717
            GI + NG+ AN + +N+ISGN   G+ +   N++TI  GN IGT + G  AI N  NGILI     I +GG  A   NIISGN   G+      +  +T++     GNYIG D++GT+ + N   GIL+ +        +SS +RN+I  NL A I+      + N + GN+IG DVTG N I N + GI++K+  D+N++G    N   NIIS +   G+ +   S+ N +  N+IG D TG   F  G
Sbjct:  171 GITISNGTTANTIKDNLISGNISTGIFITESNNQTI-TGNKIGTSVDGLSAIANM-NGILIDKSTGIVIGGNSATLRNIISGNTTAGVLVNDVLSSNNTIK-----GNYIGTDISGTLKIENG-NGILVASSGGNTIGGSSSTDRNIISGNLEAGILFNGTGTRNNVVKGNYIGTDVTGLNYIDN-HVGIILKSNSDNNLIGGSTANER-NIISGNSEIGVYMEA-SDSNVVIGNFIGPDVTGSGTFAIG 409          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94435.21790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H5W0B7_9BACT4.750e-2836.54Uncharacterized protein n=3 Tax=Bacteria TaxID=2 R... [more]
A0A7C2CFG8_9BACT5.530e-2736.97Uncharacterized protein n=1 Tax=Blastocatellia bac... [more]
UPI001681F5FF7.540e-2735.55right-handed parallel beta-helix repeat-containing... [more]
A0A3N9PI15_9BACT1.640e-2637.24T9SS C-terminal target domain-containing protein n... [more]
A0A1F4TNA6_9BACT3.430e-2636.36Uncharacterized protein (Fragment) n=1 Tax=candida... [more]
A0A7C9PWB8_9CYAN2.310e-2534.63S8 family serine peptidase n=1 Tax=Oscillatoria sp... [more]
A0A1W9RSH5_9BACT2.730e-2540.37Dockerin domain-containing protein n=1 Tax=candida... [more]
A0A7Y4ULE4_9PROT5.700e-2537.80Cadherin-like domain-containing protein n=1 Tax=Me... [more]
A0A3M1W3G4_9BACT6.480e-2535.51Beta_helix domain-containing protein (Fragment) n=... [more]
A0A1F3F3L6_9BACT9.320e-2538.40Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94435contigM-pyrifera_M_contig94435:8..739 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score117.9
Seed ortholog evalue6.8e-24
Seed eggNOG ortholog1123400.KB904752_gene844
KEGG koko:K01181
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG2931, RTX toxins and related Ca2 -binding proteins
EggNOG OGs1MU7T@1224,1S1HJ@1236,COG2834@1,COG2834@2,COG2931@1,COG2931@2,COG3210@1,COG3210@2
EC3.2.1.8
COG Functional cat.Q
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size732
Cds size732
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816857.808776-CDS-M-pyrifera_M_contig94435:7..7391622816857.808776-CDS-M-pyrifera_M_contig94435:7..739Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94435 8..739 +
1692278219.6681015-CDS-M-pyrifera_M_contig94435:7..7391692278219.6681015-CDS-M-pyrifera_M_contig94435:7..739Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94435 8..739 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94435.21790.1prot_M-pyrifera_M_contig94435.21790.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94435 8..739 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94435.21790.1

>prot_M-pyrifera_M_contig94435.21790.1 ID=prot_M-pyrifera_M_contig94435.21790.1|Name=mRNA_M-pyrifera_M_contig94435.21790.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
YEGIKLENGSRANVVIENVISGNGGDGLELVGVNDETIILGNLIGTDLQG
TDAIGNSENGILITDGYDISVGGMFADDGNIISGNGLYGIQSFLQTTKPD
TLEELQIMGNYIGVDVTGTVAMGNSLAGILLPNWNSSVERNVIGANLGAI
IIKKKRNRILGNHIGVDVTGTNQIGNLNNGIVIKADSNIVGDPHDNTTGN
IISASQYSGILVFGGSNFNSIAYNYIGVDATGVKDFGNGRDGIT
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mRNA from alignment at M-pyrifera_M_contig94435:8..739+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94435.21790.1 ID=mRNA_M-pyrifera_M_contig94435.21790.1|Name=mRNA_M-pyrifera_M_contig94435.21790.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig94435:8..739+ (Macrocystis pyrifera P11B4 male)
TATGAAGGTATAAAGTTAGAAAATGGCTCAAGAGCAAATGTAGTAATAGA AAATGTTATTTCAGGAAATGGTGGAGACGGCTTAGAATTAGTTGGTGTTA ATGATGAAACAATAATTTTAGGAAATTTAATCGGAACTGATTTACAAGGA ACTGATGCAATAGGGAATTCAGAAAATGGCATATTAATAACAGATGGTTA TGACATTTCTGTAGGTGGAATGTTTGCTGATGATGGTAATATAATCTCGG GAAATGGCCTTTACGGAATCCAATCCTTTTTACAAACCACTAAACCAGAT ACACTGGAAGAATTACAGATTATGGGCAATTATATCGGTGTTGATGTTAC CGGTACAGTAGCAATGGGTAATTCTTTGGCTGGAATTTTATTGCCAAACT GGAATTCAAGTGTGGAAAGAAATGTAATCGGAGCCAACTTGGGTGCAATT ATCATAAAAAAAAAAAGGAACAGAATACTTGGTAATCATATTGGCGTAGA TGTTACCGGAACAAATCAAATTGGAAACCTGAATAATGGTATCGTTATTA AAGCGGATTCTAATATTGTAGGGGATCCTCATGATAATACAACCGGGAAC ATAATTTCAGCAAGTCAGTATTCAGGAATTTTAGTATTTGGGGGTTCGAA TTTTAATTCGATTGCCTACAACTATATTGGAGTTGATGCAACTGGAGTAA AAGATTTTGGTAATGGACGAGACGGTATAACT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig94435:8..739+

>mRNA_M-pyrifera_M_contig94435.21790.1 ID=mRNA_M-pyrifera_M_contig94435.21790.1|Name=mRNA_M-pyrifera_M_contig94435.21790.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig94435:8..739+ (Macrocystis pyrifera P11B4 male)
TATGAAGGTATAAAGTTAGAAAATGGCTCAAGAGCAAATGTAGTAATAGA
AAATGTTATTTCAGGAAATGGTGGAGACGGCTTAGAATTAGTTGGTGTTA
ATGATGAAACAATAATTTTAGGAAATTTAATCGGAACTGATTTACAAGGA
ACTGATGCAATAGGGAATTCAGAAAATGGCATATTAATAACAGATGGTTA
TGACATTTCTGTAGGTGGAATGTTTGCTGATGATGGTAATATAATCTCGG
GAAATGGCCTTTACGGAATCCAATCCTTTTTACAAACCACTAAACCAGAT
ACACTGGAAGAATTACAGATTATGGGCAATTATATCGGTGTTGATGTTAC
CGGTACAGTAGCAATGGGTAATTCTTTGGCTGGAATTTTATTGCCAAACT
GGAATTCAAGTGTGGAAAGAAATGTAATCGGAGCCAACTTGGGTGCAATT
ATCATAAAAAAAAAAAGGAACAGAATACTTGGTAATCATATTGGCGTAGA
TGTTACCGGAACAAATCAAATTGGAAACCTGAATAATGGTATCGTTATTA
AAGCGGATTCTAATATTGTAGGGGATCCTCATGATAATACAACCGGGAAC
ATAATTTCAGCAAGTCAGTATTCAGGAATTTTAGTATTTGGGGGTTCGAA
TTTTAATTCGATTGCCTACAACTATATTGGAGTTGATGCAACTGGAGTAA
AAGATTTTGGTAATGGACGAGACGGTATAACTTATGAAGGTATAAAGTTA
GAAAATGGCTCAAGAGCAAATGTAGTAATAGAAAATGTTATTTCAGGAAA
TGGTGGAGACGGCTTAGAATTAGTTGGTGTTAATGATGAAACAATAATTT
TAGGAAATTTAATCGGAACTGATTTACAAGGAACTGATGCAATAGGGAAT
TCAGAAAATGGCATATTAATAACAGATGGTTATGACATTTCTGTAGGTGG
AATGTTTGCTGATGATGGTAATATAATCTCGGGAAATGGCCTTTACGGAA
TCCAATCCTTTTTACAAACCACTAAACCAGATACACTGGAAGAATTACAG
ATTATGGGCAATTATATCGGTGTTGATGTTACCGGTACAGTAGCAATGGG
TAATTCTTTGGCTGGAATTTTATTGCCAAACTGGAATTCAAGTGTGGAAA
GAAATGTAATCGGAGCCAACTTGGGTGCAATTATCATAAAAAAAAAAAGG
AACAGAATACTTGGTAATCATATTGGCGTAGATGTTACCGGAACAAATCA
AATTGGAAACCTGAATAATGGTATCGTTATTAAAGCGGATTCTAATATTG
TAGGGGATCCTCATGATAATACAACCGGGAACATAATTTCAGCAAGTCAG
TATTCAGGAATTTTAGTATTTGGGGGTTCGAATTTTAATTCGATTGCCTA
CAACTATATTGGAGTTGATGCAACTGGAGTAAAAGATTTTGGTAATGGAC
GAGACGGTATAACT
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