mRNA_M-pyrifera_M_contig94302.21777.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A518IKE7_9PLAN (LVIVD repeat protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A518IKE7_9PLAN) HSP 1 Score: 492 bits (1266), Expect = 2.510e-169 Identity = 238/247 (96.36%), Postives = 246/247 (99.60%), Query Frame = 1
Query: 1 PLDGYGDGGCLRGNYCFAATGHHSRGSRDDGQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPEWK 741
PLDGYGDGGCLRGNYCFAATGHHSRGSRDDG+GHGLEIFNVADPE+PTFVSRVKFPASYHI+NDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPP+SKSDNTPDPVGGIALG+GVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELK AQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAV+LGKTLEPVSVT+GKGEVMHLAVSGSRLYAAENDAGLAIYDIGPE+K
Sbjct: 217 PLDGYGDGGCLRGNYCFAATGHHSRGSRDDGKGHGLEIFNVADPEKPTFVSRVKFPASYHITNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPRSKSDNTPDPVGGIALGKGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKAAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVKLGKTLEPVSVTKGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPEFK 463
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A6C134_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris DSM 8797 TaxID=344747 RepID=A6C134_9PLAN) HSP 1 Score: 479 bits (1234), Expect = 9.350e-165 Identity = 230/247 (93.12%), Postives = 243/247 (98.38%), Query Frame = 1
Query: 1 PLDGYGDGGCLRGNYCFAATGHHSRGSRDDGQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPEWK 741
PLDG+GDGGCLRGNYCFAATGHHSRGSRDDG+GHGLEIFNVADPE+PTFVSRVKFPASYHI+NDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAH++LPP+SKSD+TPDPVGGIALG+GVIYAAGIFTGLYVVPAPGLATPV+PEQD+APEL AQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAV+LGKTLEPVSVT GKGEVMHLAVSGSRLYAAENDAGLAIYDIGP+ K
Sbjct: 219 PLDGFGDGGCLRGNYCFAATGHHSRGSRDDGKGHGLEIFNVADPEKPTFVSRVKFPASYHITNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHSILPPRSKSDHTPDPVGGIALGKGVIYAAGIFTGLYVVPAPGLATPVVPEQDKAPELTAAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVQLGKTLEPVSVTPGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPDLK 465
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A6I6ACK7_9PLAN (Uncharacterized protein n=13 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ACK7_9PLAN) HSP 1 Score: 473 bits (1218), Expect = 3.150e-162 Identity = 228/247 (92.31%), Postives = 240/247 (97.17%), Query Frame = 1
Query: 1 PLDGYGDGGCLRGNYCFAATGHHSRGSRDDGQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPEWK 741
PLDG+GDGGCLRGNYCFAATGHHSRGSRDDGQGHGLEIFNVADP+QPTFVSRVKFPASYHI+NDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHA+LPP+SKSDNTPDPVGGIALG+ VIYAAGIFTGLYVVPAPGLA+PV+ EQDRAPELKPA + GDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAV+LGK+L+PVSVT GKGEVMHLAVSGSRLYAAENDAGLAIYDIGPE K
Sbjct: 205 PLDGFGDGGCLRGNYCFAATGHHSRGSRDDGQGHGLEIFNVADPKQPTFVSRVKFPASYHITNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAILPPRSKSDNTPDPVGGIALGKDVIYAAGIFTGLYVVPAPGLASPVVSEQDRAPELKPASDQAGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVQLGKSLKPVSVTPGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPELK 451
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A517VDN2_9PLAN (LVIVD repeat protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VDN2_9PLAN) HSP 1 Score: 456 bits (1172), Expect = 4.310e-155 Identity = 221/247 (89.47%), Postives = 233/247 (94.33%), Query Frame = 1
Query: 1 PLDGYGDGGCLRGNYCFAATGHHSRGSRDDGQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPEWK 741
PLDGYGDGGCLRGNYCFAATGHHSR + DG+GHGLEIFNV DPE+P FVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDI+QPRIVAHAVLPPKSKSDNTPDPVGGIALG+ VIYAAGI TGLYVVPAPGLA+PV+ E+DRAPE+K AQ K DPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAV+LGKTL+PVSVT GKGEVMHLAVSGSRLYAAENDAGLAIYDIGP+ K
Sbjct: 219 PLDGYGDGGCLRGNYCFAATGHHSRANPKDGKGHGLEIFNVVDPEKPMFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIQQPRIVAHAVLPPKSKSDNTPDPVGGIALGKDVIYAAGILTGLYVVPAPGLASPVVREEDRAPEIKAAQDKNSDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVQLGKTLKPVSVTPGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPDLK 465
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A350KB05_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KB05_9PLAN) HSP 1 Score: 355 bits (911), Expect = 3.720e-122 Identity = 174/192 (90.62%), Postives = 185/192 (96.35%), Query Frame = 1
Query: 166 PASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPEWK 741
PASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHD+KQPRIVAHA+LPP+SKSD+TPDPVGGIALG+GVIYAAGIFTGLYVVPAPGLATPV+ EQDRAPEL Q + GDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVT+GKGEVMHLAVSGSRL+AAENDAGLAIYDI PE++
Sbjct: 1 PASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDMKQPRIVAHAILPPRSKSDHTPDPVGGIALGKGVIYAAGIFTGLYVVPAPGLATPVVREQDRAPELTANQDQAGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTKGKGEVMHLAVSGSRLHAAENDAGLAIYDISPEYE 192
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A352VTU2_9SPIR (Uncharacterized protein (Fragment) n=1 Tax=Spirochaetia bacterium TaxID=2053615 RepID=A0A352VTU2_9SPIR) HSP 1 Score: 208 bits (529), Expect = 1.260e-60 Identity = 113/249 (45.38%), Postives = 164/249 (65.86%), Query Frame = 1
Query: 1 PLDGYGDGGCLRGNYCFAATGHHSR-----GSRDD--GQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDI 726
PLDG+GDG ++G YCFAATG HSR RD G GHGLEIF++++P++P F +R+K P Y +D W V+GD+ VADT+NG+FVV+I DI +P H LP +S+ PD V GIALG+GVIY +G +T L+V+ AP +A PV PE D+ P + P Q + +F Y+P GQV +A +GDIA AACGSAG+HAV+L ++ ++ + + + + V+ + +Y AE++ GL+I+ +
Sbjct: 120 PLDGFGDGVFVQGKYCFAATGSHSRKMKERNERDPEYGGGHGLEIFDISNPKKPKFAARIKMPRLYRRQSDFWNVIVSGDYAFVADTYNGVFVVDISDINKPCFAGHQQLP-WVESEKVPDSVSGIALGKGVIYTSGRWTDLHVINAP-MARPVTPEPDKPPVIPPEQTVLNE-KFNIYKPDGQVWAAAFIGDIALAACGSAGLHAVQLLPEIKKLAEYKTESFAVDVKVNKNLVYVAESEGGLSIWKV 365
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A1G3NYY2_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetes bacterium GWF1_41_5 TaxID=1802188 RepID=A0A1G3NYY2_9SPIR) HSP 1 Score: 208 bits (529), Expect = 1.690e-60 Identity = 113/249 (45.38%), Postives = 164/249 (65.86%), Query Frame = 1
Query: 1 PLDGYGDGGCLRGNYCFAATGHHSR-----GSRDD--GQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDI 726
PLDG+GDG ++G YCFAATG HSR RD G GHGLEIF++++P++P F +R+K P Y +D W V+GD+ VADT+NG+FVV+I DI +P H LP +S+ PD V GIALG+GVIY +G +T L+V+ AP +A PV PE D+ P + P Q + +F Y+P GQV +A +GDIA AACGSAG+HAV+L ++ ++ + + + + V+ + +Y AE++ GL+I+ +
Sbjct: 61 PLDGFGDGVFVQGKYCFAATGSHSRKMKERNERDPEYGGGHGLEIFDISNPKKPKFAARIKMPRLYRRQSDFWNVIVSGDYAFVADTYNGVFVVDISDINKPCFAGHQQLP-WVESEKVPDSVSGIALGKGVIYTSGRWTDLHVINAP-MARPVTPEPDKPPVIPPEQTVLNE-KFNIYKPDGQVWAAAFIGDIALAACGSAGLHAVQLLPEIKKLAEYKTESFAVDVKVNKNLVYVAESEGGLSIWKV 306
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A2E0R476_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E0R476_9BACT) HSP 1 Score: 205 bits (522), Expect = 5.450e-57 Identity = 115/255 (45.10%), Postives = 155/255 (60.78%), Query Frame = 1
Query: 1 PLDGYGDGGCLRGNYCFAATGHHSR------GSRDDGQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLP-PKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWA--ACGSAGIHAVRLGK-TLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDIGPE 735
PLDGYGDG C+ +AATGHHSR G G+GHGLEIF+++DP +PTFVSRVKFP Y I DMW V H VADT NG+FVV++ D K P IV L P+ K + P GG+A+G G+IY AG +T L+++ AP +A+P+ E + P + P + Y+P GQV S + D+ +A ACGSAGIH VR+G+ TLEPVSV + + G ++AAE G++I+D+ P+
Sbjct: 625 PLDGYGDGLCVHDGMLYAATGHHSREPHREEGDPGYGRGHGLEIFDLSDPAKPTFVSRVKFPKFYAIGFDMWDVSVVNGHAFVADTHNGIFVVDVRDPKAPAIVGRTQLDIPEGKDE--PALFGGLAVGDGIIYGAGGWTDLHLIDAPEIASPIAKEPGKLPVIGPEVEPDNERILAAYRPEGQVWSVAMADDLPYAVAACGSAGIHVVRVGEGTLEPVSVVPTDDFTTCVCIQGRTVFAAEGTGGMSIWDLSPD 877
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A7X7NBV3_9BACT (Uncharacterized protein n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7NBV3_9BACT) HSP 1 Score: 197 bits (501), Expect = 2.970e-55 Identity = 101/210 (48.10%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 4 LDGYGDGGCLRGNYCFAATGHHSRGSRDD---GQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLP------PKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRL 606
LDGYGDG LRGN CFAATGHH++ +D G+GHG+EIF+++D P ++ VKFP Y+ D WT R H VADT NG+FV++I PR + H LP K+ PD V GIA+G GV+Y AG TGLYVV PG+A P+ P P++ PA + DP F+ Y+P GQVR A + GD+AW ACG AG+H ++L
Sbjct: 212 LDGYGDGIDLRGNLCFAATGHHAKSGTEDERFGRGHGVEIFDISDATNPRKIAGVKFPQLYNRYRDFWTPRATAKHLFVADTHNGVFVLDISTPSSPRFIGHLRLPLAKALYDYKKTTQLPDSVMGIAVGNGVLYVAGSQTGLYVVRMPGIAVPLPPLSSAPPKITPAPPLSPDPNFICYRPDGQVRGALIEGDLAWVACGRAGLHLLKL 421
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Match: A0A2D6SWK8_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SWK8_9PLAN) HSP 1 Score: 192 bits (487), Expect = 3.010e-52 Identity = 108/249 (43.37%), Postives = 146/249 (58.63%), Query Frame = 1
Query: 1 PLDGYGDGGCLRGNYCFAATGHHSR-------GSRDDGQGHGLEIFNVADPEQPTFVSRVKFPASYHISNDMWTARVAGDHCVVADTWNGLFVVNIHDIKQPRIVAHAVLPPKSKSDNTPDPVGGIALGQGVIYAAGIFTGLYVVPAPGLATPVIPEQDRAPELKPAQGKTGDPRFLTYQPGGQVRSATVVGDIAWAACGSAGIHAVRLGKTLEPVSVTQGKGEVMHLAVSGSRLYAAENDAGLAIYDI 726
PLDG+GDG L G Y +AATGHHSR G G+GHGLE+F+V+DP P VSRVK PA Y I DMW+ VA H VADT NG+FV+N+ + +PR V P + SD+ +GG+ +Y AG T L+V+ P +A V+PE D+ + PA+ + R+ Y+ GQV + +GD A ACG AG+H VRLG L+ VS + + ++VSG +YAAE GL +YD+
Sbjct: 648 PLDGFGDGLDLDGRYLYAATGHHSRETPRRNPGDAGYGRGHGLEVFDVSDPAVPKCVSRVKLPAMYDIHADMWSVTVANAHAFVADTRNGVFVLNVENPARPRFVGRWQAP-RVGSDDQFGYIGGLVPVDDHVYVAGGATDLHVLAVPNVARAVVPEADKPLRIPPARPEEAGGRYRVYRTSGQVYAVDFLGDNAILACGGAGLHVVRLGAELQVVSTLETEDLATDVSVSGDLVYAAEGAGGLGVYDL 895 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94302.21777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94302.21777.1 >prot_M-pyrifera_M_contig94302.21777.1 ID=prot_M-pyrifera_M_contig94302.21777.1|Name=mRNA_M-pyrifera_M_contig94302.21777.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp PLDGYGDGGCLRGNYCFAATGHHSRGSRDDGQGHGLEIFNVADPEQPTFVback to top mRNA from alignment at M-pyrifera_M_contig94302:3..743- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94302.21777.1 ID=mRNA_M-pyrifera_M_contig94302.21777.1|Name=mRNA_M-pyrifera_M_contig94302.21777.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=741bp|location=Sequence derived from alignment at M-pyrifera_M_contig94302:3..743- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94302:3..743- >mRNA_M-pyrifera_M_contig94302.21777.1 ID=mRNA_M-pyrifera_M_contig94302.21777.1|Name=mRNA_M-pyrifera_M_contig94302.21777.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig94302:3..743- (Macrocystis pyrifera P11B4 male)back to top |