mRNA_M-pyrifera_M_contig94110.21724.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94110.21724.1 vs. uniprot
Match: A0A517PRL6_9PLAN (Uncharacterized protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A517PRL6_9PLAN) HSP 1 Score: 222 bits (566), Expect = 7.700e-73 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
Query: 1 IDDSHGHVHHYEADKHSHQDDHHKSSENQGFPQFTSSSDHDSSAIYLNSIDVISGTRSTLKTEIKVLFQWDIIGCNSSFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYLI 336
IDDSHGHVHHYEADKHSHQDDHHKSSENQGFPQFTSSSDHDSSAIYLNSIDVISGTRSTLKTEIKVLFQWDIIGCNSSFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYLI
Sbjct: 47 IDDSHGHVHHYEADKHSHQDDHHKSSENQGFPQFTSSSDHDSSAIYLNSIDVISGTRSTLKTEIKVLFQWDIIGCNSSFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYLI 158
BLAST of mRNA_M-pyrifera_M_contig94110.21724.1 vs. uniprot
Match: A0A517X2W7_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X2W7_9PLAN) HSP 1 Score: 93.2 bits (230), Expect = 7.610e-22 Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 22 VHHYEADKHSHQDDHHKSSENQGFPQFTSSSDHDSSAIYLNSIDVISGTRSTLKTEIKVLFQWDIIGCNSSFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYLI 336
+HH+ + H+H D+H E Q QF S DHDSSA+YL++ D+ G+RST ++ + L QW +G +S F Q T + F CAPPDS SPLF+RHHAYLI
Sbjct: 50 IHHHCPNDHNHSDEHXXXHEKQNSTQFESPFDHDSSAVYLSNTDMTVGSRSTFESGMVDLLQWAPLGWDSVCVFLQNTAMRQYDFQCAPPDSESPLFIRHHAYLI 154
BLAST of mRNA_M-pyrifera_M_contig94110.21724.1 vs. uniprot
Match: UPI0011A28D2E (hypothetical protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=UPI0011A28D2E) HSP 1 Score: 77.0 bits (188), Expect = 1.710e-15 Identity = 42/79 (53.16%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 115 DHDSSAIYLNSIDVISGTRSTLKTEIKVLFQWDII-----GCNSSFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYLI 336
DHDSSAIYLNS D+ SG+RS L TE+ + F W++I C+ S P E S DCAPP + SPLF+RHHA+LI
Sbjct: 85 DHDSSAIYLNSTDLTSGSRSLLNTELLLSFHWNVIEADALACSLSGSTP-----EWSRHDCAPPGTESPLFLRHHAFLI 158
BLAST of mRNA_M-pyrifera_M_contig94110.21724.1 vs. uniprot
Match: A0A517Q5W4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q5W4_9PLAN) HSP 1 Score: 75.1 bits (183), Expect = 9.770e-15 Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 94 PQFTSSSDHDSSAIYLNSIDVISGTRSTLKTEIKVLFQWDIIGCNS-SFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYLI 336
P+ + DHDSSAIYLNS D+ SG+R+TL +E+ + F W +I ++ + + E S DCAPP + SPLF+RHHA+LI
Sbjct: 78 PEVEAPFDHDSSAIYLNSTDLTSGSRTTLNSELLLSFHWIVIEADALACSLSSGSSPEWSRQDCAPPGAESPLFLRHHAFLI 159
BLAST of mRNA_M-pyrifera_M_contig94110.21724.1 vs. uniprot
Match: A0A518I9N2_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A518I9N2_9PLAN) HSP 1 Score: 72.0 bits (175), Expect = 1.430e-13 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 115 DHDSSAIYLNSIDVISGTRSTLKTEIKVLFQW-----DIIGCNSSFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYL 333
DH+SSAIYLNS D+ S +RS L TE+ + F W D + C+ S P+L+ DCAPP + SPLF+RHHA+L
Sbjct: 83 DHESSAIYLNSTDLTSSSRSLLGTELVLSFHWNAIEVDALACSLSAATPELSRQ-----DCAPPGAESPLFLRHHAFL 155
BLAST of mRNA_M-pyrifera_M_contig94110.21724.1 vs. uniprot
Match: A0A3C0APR3_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0APR3_9PLAN) HSP 1 Score: 70.9 bits (172), Expect = 4.180e-13 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 118 HDSSAIYLNSIDVISGTRSTLKTEIKVLFQWDIIGCNSSFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYLI 336
HDSSA+YLNS D+ +GTRS ++ ++ V FQW+ G + E + + DCAPPD SPLF+RHHA LI
Sbjct: 86 HDSSAVYLNSSDLTTGTRSNIRIDMIVPFQWNETGTDLFSETLPASGPDWLGQDCAPPDPDSPLFLRHHAILI 158
BLAST of mRNA_M-pyrifera_M_contig94110.21724.1 vs. uniprot
Match: A0A518AED5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AED5_9PLAN) HSP 1 Score: 67.0 bits (162), Expect = 1.280e-11 Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 115 DHDSSAIYLNSIDVISGTRSTLKTEIKVLFQWDIIGCNSSFEFPQLTETERSVFDCAPPDSSSPLFVRHHAYLI 336
DHDSSAIYLNS D+ S +RS L TE+ + F W+ I + + E S DCAP + PLF+RHHA+LI
Sbjct: 85 DHDSSAIYLNSTDLTSSSRSLLNTELLLSFHWNAIEAGALACSLLGSTPEWSRHDCAPTGAEPPLFLRHHAFLI 158 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94110.21724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94110.21724.1 >prot_M-pyrifera_M_contig94110.21724.1 ID=prot_M-pyrifera_M_contig94110.21724.1|Name=mRNA_M-pyrifera_M_contig94110.21724.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp IDDSHGHVHHYEADKHSHQDDHHKSSENQGFPQFTSSSDHDSSAIYLNSIback to top mRNA from alignment at M-pyrifera_M_contig94110:407..745- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94110.21724.1 ID=mRNA_M-pyrifera_M_contig94110.21724.1|Name=mRNA_M-pyrifera_M_contig94110.21724.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=339bp|location=Sequence derived from alignment at M-pyrifera_M_contig94110:407..745- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94110:407..745- >mRNA_M-pyrifera_M_contig94110.21724.1 ID=mRNA_M-pyrifera_M_contig94110.21724.1|Name=mRNA_M-pyrifera_M_contig94110.21724.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig94110:407..745- (Macrocystis pyrifera P11B4 male)back to top |