mRNA_M-pyrifera_M_contig941.21718.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig941.21718.1
Unique NamemRNA_M-pyrifera_M_contig941.21718.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: D7FSW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSW0_ECTSI)

HSP 1 Score: 526 bits (1354), Expect = 4.010e-184
Identity = 265/388 (68.30%), Postives = 303/388 (78.09%), Query Frame = 1
Query:    1 DEQFHPTEDAAVSASEDGTARVWDLSSGKCVKSLQAHNKKFEVLRACWAPPGKTDDSVAIATGSADGTVRLWGIRGSDDSGGXXXXXXXXDKETGVERFQALEVVGQLRHRNKAKGLDGQVYSCQFITDCEDANDASSPTSGTLRLLTASDSTVHLWDVETQKRVAFRALSKVGSHSIGGERNPDDVSFIFDAKPRPGSGSSTLAVALSDGTVRVGDILARGGQVEVLRGSSNTHLTSLAWSEDGAVLASCGGNGTVTVWDTKTWTVRSELSGHSRAVYGAAFYPGDGGGSDM--------------AEPKLLLSWSSDETVCAWDAGRARGHGTAPLVSLSTEEGFPIYSCSVSPDGRRLAVAGXXXXXKAAGFMGVPIKVVLLGDD 1122
            D QFHPTEDAA+SASEDGTARVWDLSSGKC KSL+ HNKK EVLRACWAPPG  +DSV++ATGSADG VRLWGIR  D            D+++GV+R+Q+L+VVGQLRHRN+AKGLDGQVYSC FI D       SS  +  + LLTASDS+VHLWDVET+KRV+ RALSKVG+HSIGGERNPDD++F+FDAKPRPGSGSS LAVALSDGTVRVGD+L +G +  VLRG ++THLTSLAWS+DG VLASCGGNGT+TVWDT+TWT RS L GHSR VYGAAFY   G G                   P+LLLSWSSDETVCAWD GRA G  TAPL +LS EEGFP+YSCSVS DGRR A+AG     K+AGF+GVPIK+V L D+
Sbjct:   36 DFQFHPTEDAAISASEDGTARVWDLSSGKCAKSLEGHNKKHEVLRACWAPPGAANDSVSVATGSADGIVRLWGIRHGDGR----------DEKSGVDRYQSLKVVGQLRHRNEAKGLDGQVYSCHFIPDPSGGAPPSS--AAAMCLLTASDSSVHLWDVETRKRVSSRALSKVGAHSIGGERNPDDLAFVFDAKPRPGSGSSVLAVALSDGTVRVGDVLQQGEKAAVLRGVTDTHLTSLAWSDDGTVLASCGGNGTITVWDTRTWTARSVLWGHSRPVYGAAFYSCAGNGXXXXXXXXXXXXXXGQDCPPQLLLSWSSDETVCAWDTGRATGDATAPLATLSVEEGFPVYSCSVSADGRRFALAGGGGDEKSAGFLGVPIKLVDLSDE 411          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A835YNR1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR1_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.770e-46
Identity = 149/457 (32.60%), Postives = 190/457 (41.58%), Query Frame = 1
Query:    1 DEQFHPT-EDAAVSASEDGTARVWDLSSGKCVKSLQAHNKKFEVLRACWAPPGKTDDSVAIATGSADGTVRLWGIRGSDDSGGXXXXXXXXDKETGVERFQALEVV------GQLRHRNKAKGLDGQVYSCQFITDCEDANDASSPTSGTL------------RLLTASDSTVHLWDVETQKRVAFRALSKVGSHSIGGE-RNPDDVSFIFDAKPRPGSGSS-----TLAVALSDGTVRVGDILAR--GGQVEVLRGSSNT--------------HLTSLAWSEDGAVLASCGGNGTVTVWDTKTWTVRSEL---------------------------SGHSRAVYGAAFYPGDGGGSDMAEPKLLLSWSSDETVCAWDAGRA----RGHGTAPLVSLSTEE-------------------GFPIYSCSVSPDGRRLAVAGXXXXXKAAGFMGVPI 1098
            D QFHPT    A S SEDGT RVWD+  G  + S  A   K EVLR CWAPPG     + +A+GSADG VRLW +  +  +               +   + L+V       GQ+ +  +  G DG   S                                  L+ A+D  V LWDV T       A S    H+ GG  RNPD+  F+FDAK   GSG S     TLA ALSDGTVRV  + +      +      SN+              HLT++AW+ DG+ LA+CG    V VWD +TWT R+ L                           + HSR VYG  F          + P+LLLSWSSD T+ AWD G A     G   APL   ST                      +PI  C+++ D   + VAG     + A   GVP+
Sbjct:   46 DFQFHPTVHSRAASCSEDGTVRVWDVQRGVSIAS--AKGSKDEVLRICWAPPGTP--GIDLASGSADGLVRLWAMSAATSTATRGAPGRDGSSAAALRCVKTLDVKAAAGGDGQV-YALQFIGADGGGSSSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLMVAADDAVSLWDVGTGVVTRRWAFSSSAQHAHGGAARNPDNQVFVFDAKVCCGSGGSGGGDGTLAAALSDGTVRVQPLDSELPASTLHPCGSGSNSGXXXXXXXXXXXXAHLTAVAWAPDGSALAACGXXXGVEVWDARTWTRRAALQAQALAVSVRERLRCAANTQYGDHLPAAAHSRPVYGVMFC--------ASAPQLLLSWSSDGTLKAWDWGAAANDMNGGDFAPLQQRSTAAQLVDVMRITCQHREVLSSGDYPILHCALARDASSVVVAGGDSGARGAAMTGVPV 489          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A7S2S0D4_9STRA (Peroxin-7 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0D4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.150e-44
Identity = 136/395 (34.43%), Postives = 184/395 (46.58%), Query Frame = 1
Query:   10 FHPTEDAAVS-ASEDGTARVWDLSSG--KCVKSLQAHNKKFEVLRACWAPPGK------------TDDSVA--IATGSADGTVRLWGIRGSDDSGGXXXXXXXXDKETGVERFQALEVVGQLRHRNKAKGLDGQVYSCQFITDCEDANDASSPTSGTLRLLTASDSTVHLWDVE------TQKRVAFRALSKVGSHSI-GGERNPDDVSFIFDAKPRPGSGSSTL-AVALSDGTVRVGDILARGGQVE----VLRGSSNTHLTSLAWSEDGAVLASCGGNGTVTVWDTKTWTVRSELSG-HSRAVYGAAFYPGDGGGSDMAEPKLLLSWSSDETVCAWDAGRARGHGTAPLVSLSTEEG--FPIYSCSVSPDGRRLAVAGXXXXXKAAGFMGVPI 1098
            F P   + V+ ASED TARVW   +    C+ +L+ H+   EVLR  WAPP              TD   A  + TG ADG VR+W +                          A E V  L H     G D QVYSC F TD       S    G   ++ A+ S V+LWD++      T + +A    + + S  + GGERN    +++FD +      S TL A ALSDG+ R+      GG V      L  S   H+TS++W+ DG  LA   G+G++ +WDT+TW  R  L G H R V+GA F+P        A P  L+SWSSD ++ AW+   +     APL   ST EG  +PI SC  S  G  L +AG      +  F+G P+
Sbjct:   50 FQPGSRSLVATASEDCTARVWQAGASGYSCLATLRGHSS--EVLRVSWAPPSLSAGLSMAAGSAGTDSEAAHVLCTGGADGAVRVWKV---------------------AVDGTAHEEVALLDH-----GEDNQVYSCLF-TD-------SIAGGGAPVVIAAAGSKVNLWDLDATSAPATGRLIAEWEYASLPSGQVYGGERNAAQENYVFDLQISSLGASHTLIAAALSDGSTRITG--GHGGAVHQNVVALTTSDMVHVTSVSWAADGLSLACSRGDGSIVIWDTRTWRSRGVLQGGHQRPVFGAKFHP--------ASPHFLVSWSSDGSMGAWNTSVSAEDMDAPLSMFSTREGADYPILSCDFSSAGDALLIAGGSGSGNS--FLGTPV 396          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A7S2CQ19_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQ19_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.330e-38
Identity = 101/276 (36.59%), Postives = 143/276 (51.81%), Query Frame = 1
Query:  340 AKGLDGQVYSCQFITDCEDANDASSPTSGTLRLLTASDSTVHLWDV-------ETQKRVAFRALSKVGSHSIGGERNPDDVSFIFDAK---PRPGSGSSTLAVALSDGTVRVGDILARGG----QVEVLRGSSNTHLTSLAWSEDGAVLASCGGNGTVTVWDTKTWTVRSELSG-HSRAVYGAAFYPGDGGGSDMAEPKLLLSWSSDETVCAWDAGRARG-----HGTAPLVSLSTEEGFPIYSCSVSPDGRRLAVAGXXXXXKAAGFMGVPIKVV 1107
            A G D QVYSC FI +             T  L+TA++STV  WD+       E     ++ ++ +   +  G +RNP++ +F+FD +   P  G  +   A ALSDGT RV   L  GG     V  L  +    L+++ WS DG  LA+  G+G++ VWD++TW  R+ L+G HSR  YG+ F+P D        P LLLSWSSD T+  WD+ R        +G  P  + S    +PI  C+ SPDGR L VAG       + F+GVP+ +V
Sbjct:    8 AHGKDAQVYSCGFIPE-------------TSFLITAAESTVRCWDLRVGSSSEEPTSAWSYDSIGRTTPYG-GAQRNPNNENFVFDIRVSPPATGGVNRLFAAALSDGTARVSAGLHAGGVSPTSVADLSLNDGVMLSAIEWSPDGRSLAASRGDGSLLVWDSRTWKCRAVLAGAHSRPCYGSVFHPHD--------PALLLSWSSDGTIALWDSLRTERPEPIHYGLTPHQADSPS--YPILRCAWSPDGRSLVVAGGDGSGSMS-FLGVPVWLV 258          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A7S1VKZ2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKZ2_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.540e-29
Identity = 115/416 (27.64%), Postives = 173/416 (41.59%), Query Frame = 1
Query:   34 VSASEDGTARVWDLSSGKCVKSLQAHNKKFEVLRACWAPP---------GKTDDSVAIATGSADGTVRLWGIRGSDDSGGXXXXXXXXDKETGVERFQALEVVGQLRHRNKAKGLDGQVYSCQFITDCEDA-----NDASSPTSGTLRLLTASDSTVHLWDVETQKR----------VAFRALSKVG-------------------------------------------------SHSIGGERNPDDVSFIFDAKPRPGSGSSTLAVALSDGTVRVGDILARGGQVEVLR-GSSNTHLTSLAWSEDGAVLASCGGNGTVTVWDTKTWTVRSEL----------SGHS--RAVYGAAFYPGDGGGSDMAEPKLLLSWSSDETVCAWDAGRARGHGTAPLVSLSTEEGFPIYSCSVS 1023
             +AS+D T R+W+ ++     +L+ H+K+ EVLR  WA           G       IA+G ADG V++W +  S D+ G         K        +LE+  +    + ++    Q+Y  QFI D +       ND S   S    LLT+S+  VHLW++E  +           + F +L  VG                                                 +   GGERNP+++ F+FD    P +G +   VALSDG++R+  +  RG  V  L      +HLTSLAW   G  LASC   G V +WD    T  S             GH+  R +YGA +           E  L+LSW +D  +C WDA  + G+  AP+  L ++  +P ++  V+
Sbjct:   78 ATASQDATVRIWNTATHTLEHTLEGHSKENEVLRVAWASSAWASRDLKRGPKQHQHLIASGGADGVVKVWSL--SSDAAGSAKW-----KCVATLDHSSLELRPKPATNDGSEPDPPQIYGLQFIDDWKGVGGGGCNDDSHTNSF---LLTSSEDFVHLWEIENVQNGKVFFIEVLSIRFTSLYDVGYGVSLFPVTSNGIDITSNKENMDAAAAPQTIDLSNPVDPATVLNPEQEQNQPFGGERNPENIIFVFDVSYCPANGIT--GVALSDGSLRL--VNGRGVAVAALTLPGCQSHLTSLAWDSTGNRLASCVATGHVILWDLHLGTADSHEWRPSCRAVLEGGHTLGRPLYGAKY---------CGEGNLILSWGADGKICLWDA-HSLGNIQAPISVLLSKPDYPFFAVDVA 469          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A7S4E2U9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2U9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.040e-27
Identity = 108/337 (32.05%), Postives = 153/337 (45.40%), Query Frame = 1
Query:   34 VSASEDGTARVWDLSSGKCVKSLQAHNKKFEVLRACWAPPGKTDDSVA--IATGSADGTVRLWGIRGSDDSGGXXXXXXXXDKETGVERFQALEVVGQLRHRNKAKGLDGQVYSCQFITDCEDANDASSPTSGTLRLLTASDSTVHLWDVETQKRVAFRALSKVGSHSIGGERNPDDVSFIFDAKPRPGSGS----STLAVALSDGTVRVGDILARGGQVEVLRGSSNTHLTSLAWSEDGAVLASCGGNGTVTVWDTKTWTVRSELSG-HSRAVYGAAFYPGDGGGSDMAEPKLLLSWSSDETVCAWDAGRARGHGTAPLVSLSTEEGFPIYSCSVS 1023
            V+ASEDGTA+VW L+ G+    +     K EVLR  WAPP   D + A  +A   ADG   LW  RG D                    + A + + +L H     G D QVY C +   C DA  A         LLTA+ + V  WDV   K +      K  S+    +    D +++FD +P P        +T+A A+SDGT RV D+        VLR   ++ +T++ W   G  +ASC G+G   VWD +TW +   L G H+   YGAA    DG  +  A   L   WS ++ +   DA +     TAP+   +     P++ C+ S
Sbjct:   35 VTASEDGTAKVWRLADGRLEGEVAQSQTKDEVLRVAWAPPIVRDAAGASLLAVAGADGFCNLW--RGDD--------------------WSAPKSLQRLDH-----GGD-QVYGCAWSA-CGDAYGAW--------LLTAAGAAVRTWDVNAGKSI------KQWSY----QEPRGDQAYVFDVQPAPRDADDALRATIACAVSDGTARVRDVRL-DYDARVLRAPGDSKVTAVGWL-GGTAVASCYGDGCCRVWDARTWKLLGRLKGAHASPCYGAA--KTDGFVASWAAEGLAF-WSCEDALRKADATKK---ATAPITDAAGNA-VPLFQCAFS 315          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A7S4AKL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKL3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.160e-20
Identity = 70/205 (34.15%), Postives = 103/205 (50.24%), Query Frame = 1
Query:  511 SKVGSHSIGGERNPDDVSFIFDAKPRPGSGSSTLAVALSDGTVRVGDILARGGQVEVLR-GSSNTHLTSLAWSEDGAVLASCGGNGTVTVWDTKTWTVRSELSGHSRAVYGAAFYPGDGGGSDM--------AEPKLLLSWSSDETVCAWDAGRARGHGTAPLVSLSTEEGFPIYSCSVSPDGRRLAVAGXXXXXKAAGFMGVPI 1098
            +K GS + GGERNP +  F+FDA   PGSG   L VALSDG++R+  +  RG  + V++   S +HLTS  W   G  LA+C G G +  W     +   + + H+ A   A F  G   G  +         +  LL+SW  D  +C W + +A G+   P+  L  +  +PI++  +S   R L V G        GF+GVP+
Sbjct:  471 AKDGSVAFGGERNPSNTIFVFDAAYSPGSG--LLGVALSDGSLRL--VNGRGYCISVIQLPGSKSHLTSFCWDATGNRLATCVGTGHLITWSLDPES-HDKGNYHTAATCTAIFEGGHQSGRPLFGSRFCGGEDENLLISWGIDGKLCLWHS-KASGNIYDPVAILKDDGSYPIFAVEISRSERNLVVGGG----SEGGFIGVPL 665          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A7S1DA97_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA97_CYCTE)

HSP 1 Score: 95.9 bits (237), Expect = 9.070e-19
Identity = 73/219 (33.33%), Postives = 110/219 (50.23%), Query Frame = 1
Query:  520 GSHSIGGERNPDDVSFIFDAKPRPGSGSSTLAVALSDGTVRVGDILARGGQVEVLR-GSSNTHLTSLAWSEDGAVLASCGGNGTVTVW--DTKTWTVRSELS---------GHS--RAVYGAAFYPGDGGGSDMAEPKLLLSWSSDETVCAWDAGRARGHGTAPLVSL-STEEGFPIYSCSVSPDGR-----------RLAVAGXXXXXKAAGFMGVPI 1098
            G    GGERNPD++ F+FDA   P SG   L  ALSDG+VR+  +  RG  V +L      +H+TS +W   G  LASC   G + +W  D   ++ R  ++         GH   R ++GA +  G        E +LL+SW  D  +C WD+ R++G+  APL +L +  + +PIY+  +   G            R+AV G     +  GF+G+P+
Sbjct:   83 GGVGYGGERNPDNLVFVFDASYCPSSG--LLGAALSDGSVRL--MNGRGVCVSILTLPGCQSHMTSFSWDSSGTRLASCVATGHLILWEIDLAGYSYRGSVTPACMAVLEGGHQVGRPLFGAQYCGGK-------EEELLVSWGIDGRLCLWDS-RSQGNIGAPLNTLVAKNDDYPIYAIDMFHGGXXXXXXXXXEVSRMAVGGG----REGGFLGIPL 285          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A7S1ZZE4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZE4_TRICV)

HSP 1 Score: 90.9 bits (224), Expect = 1.320e-16
Identity = 65/176 (36.93%), Postives = 90/176 (51.14%), Query Frame = 1
Query:  529 SIGGERNPDDVSFIFDAKPRPGSGSSTLAVALSDGTVRVGDILARGGQVEVLR-GSSNTHLTSLAWSEDGAVLASCGGNGTVTVW-----DTKTWT---VRSELSG---HSRAVYGAAFYPGDGGGSDMAEPKLLLSWSSDETVCAWDAGRARGHGTAPLVSLSTEEGFPIYSCSV 1020
            + GG+RNPD++ F+FDA   P +G   L  ALSDGT+R+  +  RG  V +L+      H+TSLAW E G  LAS      V +W     D + W      + L G   + R V+GA +  G           LLLSW  D  +C WDA R+ G   +PL  L ++  FP+Y+  V
Sbjct:  203 AFGGDRNPDNLVFVFDASFCPSNG--LLGAALSDGTLRL--VNGRGVCVSLLQLPGCRAHITSLAWDETGTRLASTIATSHVILWTVDGGDGRGWPRSGCAAVLEGGHDYGRPVFGAKYCGGP-------NQDLLLSWGVDGKMCVWDA-RSTGQIRSPLSILVSDGSFPLYAVDV 366          
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Match: A0A7S0QGS5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QGS5_9CRYP)

HSP 1 Score: 85.9 bits (211), Expect = 4.720e-15
Identity = 80/313 (25.56%), Postives = 133/313 (42.49%), Query Frame = 1
Query:    7 QFHPTEDAAVS-ASEDGTARVWDLSSGKCVKSLQAHNKKFEVLRACWAPPGKTDDSVAIATGSADGTVRLWGIRGSDDSGGXXXXXXXXDKETGVERFQALEVVGQLRHRNKAKGLDGQVYSCQFITDCEDANDASSPTSGTLRLLTASDSTVHLWDVETQKRVAFRALSKVGSHSIGG-ERNPDDVSFIFDAKPRPGSGSSTLAVALSDGTVRVGDI-LARGGQVEVLRGSSNTHLTSLAWSEDGAVLASCGGNGTVTVWDTKTWTVRSELSGHSRAVYGAAFYPGDGGGSDMAEPKLLLSWSSDETVCAWD 936
            +F P+++  ++ +SED T RVWD+ +G+ +  +Q H     V    W+P G       +AT  ADG + +W                     + +E+ Q L              ++G V++  F+              G  R+++ASDS + LWD+ET   +     +       GG ERNP    ++F    R  +    LA+A+SD T+R+ D+ LA   +  VL+G     + S+    DG  + S  G+    VWD +   VR  L GH+  V+   +               + + S+D T+  WD
Sbjct:   38 EFSPSDERLLATSSEDATVRVWDVCTGRELHRVQGHGDDA-VYSVAWSPEG-----AMLATAGADGRLCIWNA-------------------STLEQKQVL-------------AMEGDVFAGVFV-------------DGQRRVVSASDSCITLWDIETGTALIRSNATAATGFVFGGLERNPAATPYVFAM--RHSAERQLLALAVSDATMRIWDMDLA---ERVVLKGHGRD-VCSVTLRGDGDEMLSGSGDNMAGVWDLRGLRVRHVLRGHTGTVHDCCYL----------STGAVCTVSNDRTIRLWD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig941.21718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FSW0_ECTSI4.010e-18468.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNR1_9STRA1.770e-4632.60WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2S0D4_9STRA2.150e-4434.43Peroxin-7 n=1 Tax=Rhizochromulina marina TaxID=103... [more]
A0A7S2CQ19_9STRA1.330e-3836.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1VKZ2_9STRA1.540e-2927.64Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4E2U9_9STRA4.040e-2732.05Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4AKL3_9STRA5.160e-2034.15Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1DA97_CYCTE9.070e-1933.33Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1ZZE4_TRICV1.320e-1636.93Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S0QGS5_9CRYP4.720e-1525.56Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig941contigM-pyrifera_M_contig941:4754..5875 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score524.6
Seed ortholog evalue3.7e-146
Seed eggNOG ortholog2880.D7FSW0
KEGG koko:K01265,ko:K11797
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transcription initiation from RNA polymerase II promoter
EggNOG OGsCOG2319@1,KOG0263@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-27_006570.1
EC3.4.11.18
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons1
Model size1122
Cds size1122
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816854.2839706-CDS-M-pyrifera_M_contig941:4753..58751622816854.2839706-CDS-M-pyrifera_M_contig941:4753..5875Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig941 4754..5875 +
1692278217.6603315-CDS-M-pyrifera_M_contig941:4753..58751692278217.6603315-CDS-M-pyrifera_M_contig941:4753..5875Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig941 4754..5875 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig941.21718.1prot_M-pyrifera_M_contig941.21718.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig941 4754..5875 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig941.21718.1

>prot_M-pyrifera_M_contig941.21718.1 ID=prot_M-pyrifera_M_contig941.21718.1|Name=mRNA_M-pyrifera_M_contig941.21718.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=374bp
DEQFHPTEDAAVSASEDGTARVWDLSSGKCVKSLQAHNKKFEVLRACWAP
PGKTDDSVAIATGSADGTVRLWGIRGSDDSGGGSGAGGGGDKETGVERFQ
ALEVVGQLRHRNKAKGLDGQVYSCQFITDCEDANDASSPTSGTLRLLTAS
DSTVHLWDVETQKRVAFRALSKVGSHSIGGERNPDDVSFIFDAKPRPGSG
SSTLAVALSDGTVRVGDILARGGQVEVLRGSSNTHLTSLAWSEDGAVLAS
CGGNGTVTVWDTKTWTVRSELSGHSRAVYGAAFYPGDGGGSDMAEPKLLL
SWSSDETVCAWDAGRARGHGTAPLVSLSTEEGFPIYSCSVSPDGRRLAVA
GGGGGGKAAGFMGVPIKVVLLGDD
back to top

mRNA from alignment at M-pyrifera_M_contig941:4754..5875+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig941.21718.1 ID=mRNA_M-pyrifera_M_contig941.21718.1|Name=mRNA_M-pyrifera_M_contig941.21718.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig941:4754..5875+ (Macrocystis pyrifera P11B4 male)
GACGAGCAGTTCCACCCTACCGAAGATGCAGCGGTCTCCGCCAGCGAGGA CGGAACGGCCCGCGTGTGGGACCTCAGCAGCGGCAAGTGTGTGAAATCTC TGCAGGCCCACAACAAGAAGTTCGAGGTCTTGCGCGCATGCTGGGCGCCA CCGGGAAAGACCGACGACTCCGTTGCGATTGCCACCGGTTCGGCGGACGG CACGGTGCGCCTGTGGGGCATCCGGGGGAGCGATGACAGCGGCGGCGGCA GTGGTGCTGGTGGCGGTGGCGACAAGGAGACCGGGGTAGAACGGTTTCAA GCTCTGGAAGTCGTCGGGCAGCTGCGGCACCGAAATAAGGCGAAAGGACT GGACGGCCAAGTGTACTCTTGCCAGTTCATTACCGACTGCGAAGACGCAA ATGACGCCTCATCGCCCACTTCGGGAACGCTGCGTCTTCTCACGGCTAGC GACTCCACCGTGCACCTATGGGACGTGGAAACGCAGAAGCGGGTGGCGTT CCGAGCTTTGTCTAAGGTGGGCAGCCACTCGATAGGCGGTGAGCGGAATC CGGATGACGTCTCCTTCATTTTCGATGCCAAGCCCCGTCCGGGCTCAGGG AGCTCTACCCTAGCCGTCGCGCTCAGCGATGGAACCGTGCGTGTCGGCGA CATCCTGGCCAGGGGGGGGCAAGTCGAGGTGCTCAGGGGAAGCTCGAACA CTCACCTGACGAGCTTGGCATGGTCGGAGGACGGAGCGGTCCTCGCTTCA TGCGGGGGAAACGGAACGGTTACCGTGTGGGATACCAAGACTTGGACGGT GCGGTCGGAACTTTCCGGGCACTCCCGAGCGGTGTACGGGGCGGCCTTCT ACCCTGGCGACGGAGGGGGTTCGGATATGGCGGAGCCGAAGCTGTTACTG TCATGGTCTAGCGATGAAACCGTTTGCGCTTGGGATGCTGGTAGAGCACG CGGACATGGAACGGCGCCGTTAGTATCACTGTCGACGGAGGAAGGGTTTC CCATATATAGTTGCTCTGTCTCGCCGGACGGAAGGAGGCTGGCCGTTGCC GGAGGGGGCGGAGGAGGAAAGGCGGCGGGATTTATGGGTGTGCCCATTAA GGTGGTGTTGCTGGGTGACGAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig941:4754..5875+

>mRNA_M-pyrifera_M_contig941.21718.1 ID=mRNA_M-pyrifera_M_contig941.21718.1|Name=mRNA_M-pyrifera_M_contig941.21718.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2244bp|location=Sequence derived from alignment at M-pyrifera_M_contig941:4754..5875+ (Macrocystis pyrifera P11B4 male)
GACGAGCAGTTCCACCCTACCGAAGATGCAGCGGTCTCCGCCAGCGAGGA
CGGAACGGCCCGCGTGTGGGACCTCAGCAGCGGCAAGTGTGTGAAATCTC
TGCAGGCCCACAACAAGAAGTTCGAGGTCTTGCGCGCATGCTGGGCGCCA
CCGGGAAAGACCGACGACTCCGTTGCGATTGCCACCGGTTCGGCGGACGG
CACGGTGCGCCTGTGGGGCATCCGGGGGAGCGATGACAGCGGCGGCGGCA
GTGGTGCTGGTGGCGGTGGCGACAAGGAGACCGGGGTAGAACGGTTTCAA
GCTCTGGAAGTCGTCGGGCAGCTGCGGCACCGAAATAAGGCGAAAGGACT
GGACGGCCAAGTGTACTCTTGCCAGTTCATTACCGACTGCGAAGACGCAA
ATGACGCCTCATCGCCCACTTCGGGAACGCTGCGTCTTCTCACGGCTAGC
GACTCCACCGTGCACCTATGGGACGTGGAAACGCAGAAGCGGGTGGCGTT
CCGAGCTTTGTCTAAGGTGGGCAGCCACTCGATAGGCGGTGAGCGGAATC
CGGATGACGTCTCCTTCATTTTCGATGCCAAGCCCCGTCCGGGCTCAGGG
AGCTCTACCCTAGCCGTCGCGCTCAGCGATGGAACCGTGCGTGTCGGCGA
CATCCTGGCCAGGGGGGGGCAAGTCGAGGTGCTCAGGGGAAGCTCGAACA
CTCACCTGACGAGCTTGGCATGGTCGGAGGACGGAGCGGTCCTCGCTTCA
TGCGGGGGAAACGGAACGGTTACCGTGTGGGATACCAAGACTTGGACGGT
GCGGTCGGAACTTTCCGGGCACTCCCGAGCGGTGTACGGGGCGGCCTTCT
ACCCTGGCGACGGAGGGGGTTCGGATATGGCGGAGCCGAAGCTGTTACTG
TCATGGTCTAGCGATGAAACCGTTTGCGCTTGGGATGCTGGTAGAGCACG
CGGACATGGAACGGCGCCGTTAGTATCACTGTCGACGGAGGAAGGGTTTC
CCATATATAGTTGCTCTGTCTCGCCGGACGGAAGGAGGCTGGCCGTTGCC
GGAGGGGGCGGAGGAGGAAAGGCGGCGGGATTTATGGGTGTGCCCATTAA
GGTGGTGTTGCTGGGTGACGACGACGAGCAGTTCCACCCTACCGAAGATG
CAGCGGTCTCCGCCAGCGAGGACGGAACGGCCCGCGTGTGGGACCTCAGC
AGCGGCAAGTGTGTGAAATCTCTGCAGGCCCACAACAAGAAGTTCGAGGT
CTTGCGCGCATGCTGGGCGCCACCGGGAAAGACCGACGACTCCGTTGCGA
TTGCCACCGGTTCGGCGGACGGCACGGTGCGCCTGTGGGGCATCCGGGGG
AGCGATGACAGCGGCGGCGGCAGTGGTGCTGGTGGCGGTGGCGACAAGGA
GACCGGGGTAGAACGGTTTCAAGCTCTGGAAGTCGTCGGGCAGCTGCGGC
ACCGAAATAAGGCGAAAGGACTGGACGGCCAAGTGTACTCTTGCCAGTTC
ATTACCGACTGCGAAGACGCAAATGACGCCTCATCGCCCACTTCGGGAAC
GCTGCGTCTTCTCACGGCTAGCGACTCCACCGTGCACCTATGGGACGTGG
AAACGCAGAAGCGGGTGGCGTTCCGAGCTTTGTCTAAGGTGGGCAGCCAC
TCGATAGGCGGTGAGCGGAATCCGGATGACGTCTCCTTCATTTTCGATGC
CAAGCCCCGTCCGGGCTCAGGGAGCTCTACCCTAGCCGTCGCGCTCAGCG
ATGGAACCGTGCGTGTCGGCGACATCCTGGCCAGGGGGGGGCAAGTCGAG
GTGCTCAGGGGAAGCTCGAACACTCACCTGACGAGCTTGGCATGGTCGGA
GGACGGAGCGGTCCTCGCTTCATGCGGGGGAAACGGAACGGTTACCGTGT
GGGATACCAAGACTTGGACGGTGCGGTCGGAACTTTCCGGGCACTCCCGA
GCGGTGTACGGGGCGGCCTTCTACCCTGGCGACGGAGGGGGTTCGGATAT
GGCGGAGCCGAAGCTGTTACTGTCATGGTCTAGCGATGAAACCGTTTGCG
CTTGGGATGCTGGTAGAGCACGCGGACATGGAACGGCGCCGTTAGTATCA
CTGTCGACGGAGGAAGGGTTTCCCATATATAGTTGCTCTGTCTCGCCGGA
CGGAAGGAGGCTGGCCGTTGCCGGAGGGGGCGGAGGAGGAAAGGCGGCGG
GATTTATGGGTGTGCCCATTAAGGTGGTGTTGCTGGGTGACGAC
back to top