mRNA_M-pyrifera_M_contig94078.21711.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: A0A7S2BTX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BTX6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 5.860e-11 Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 46 LSDFYRATNGSNWFVNTGWLEGEPCGDNDRARGSSSWFGVQCEGGSVFTINLQMNGLSGYLPDSIAQLPRLTSFGIFQND 285 L+ FY AT G +W NT W+ G PC ++SW+G+ C GS+ +I L+ L+GY+P I L LTS + +N+ Sbjct: 5 LAYFYTATGGPSWQTNTQWMSGSPC--------TTSWYGLDCVSGSIRSIELRAENLTGYVPTEIGILTALTSMMLDENN 76
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: X0TWF7_9ZZZZ (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0TWF7_9ZZZZ) HSP 1 Score: 65.5 bits (158), Expect = 1.480e-9 Identity = 34/78 (43.59%), Postives = 41/78 (52.56%), Query Frame = 1 Query: 28 SEEYNILSDFYRATNGSNWFVNTGWLEGE-PCGDNDRARGSSSWFGVQCEGGSVFTINLQMNGLSGYLPDSIAQLPRL 258 +EE L D Y +T+G NW N+ WLE PC WFGV CE G V+ INLQ N LSG +P + L L Sbjct: 18 TEECEALVDLYNSTDGPNWTDNSNWLEALFPC----------EWFGVSCEAGHVYQINLQTNNLSGSIPTELGNLSSL 85
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: A0A2E1A763_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E1A763_9CHLR) HSP 1 Score: 65.5 bits (158), Expect = 3.250e-9 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1 Query: 34 EYNILSDFYRATNGSNWFVNTGWLE-GEPCGDNDRARGSSSWFGVQCEGGSVFTINLQMNGLSGYLPDSIAQLPRL 258 E L D Y +T+G+NW GWL PCG + W+G++CEGGSV +I+L N LSG++P SI L L Sbjct: 1386 ECEALVDLYNSTDGANWAHQDGWLRTSTPCGSYGK------WYGIRCEGGSVISISLGGNLLSGHIPSSIGNLTNL 1455
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: UPI00068E708E (T9SS type A sorting domain-containing protein n=1 Tax=Psychroserpens jangbogonensis TaxID=1484460 RepID=UPI00068E708E) HSP 1 Score: 62.8 bits (151), Expect = 2.540e-8 Identity = 36/88 (40.91%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 22 GYSEEYNILSDFYRATNGSNWFVNTGWLEGEPCGDNDRARGSSSWFGVQCEGGSVFTINLQMNGLSGYLPDSIAQLPRLTSFGIFQND 285 G E L DFY AT+G NW +NT W P S W G+ E G V ++ L G+SG +P+SI LP L SF +FQN+ Sbjct: 288 GTPGERQALIDFYNATDGPNWAINTNWDTSAPL---------SEWAGITIENGHVASMGLGNVGVSGNIPNSIFDLPFLESF-VFQNN 365
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: UPI00058CCAE5 (T9SS type A sorting domain-containing protein n=1 Tax=Psychroserpens mesophilus TaxID=325473 RepID=UPI00058CCAE5) HSP 1 Score: 59.7 bits (143), Expect = 2.930e-7 Identity = 35/88 (39.77%), Postives = 43/88 (48.86%), Query Frame = 1 Query: 22 GYSEEYNILSDFYRATNGSNWFVNTGWLEGEPCGDNDRARGSSSWFGVQCEGGSVFTINLQMNGLSGYLPDSIAQLPRLTSFGIFQND 285 G E L DFY AT+G NW +NT W P S W G+ E G V + L G +G LP+SI LP L SF +F N+ Sbjct: 288 GPPSERQALIDFYNATDGPNWGINTNWNTAAPL---------SEWAGITLENGHVTAMGLINVGATGNLPNSILNLPFLESF-VFSNN 365
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: A0A8B5WB75_9GAMM (Uncharacterized protein n=1 Tax=Wenzhouxiangella sp. TaxID=1979961 RepID=A0A8B5WB75_9GAMM) HSP 1 Score: 57.8 bits (138), Expect = 1.260e-6 Identity = 32/82 (39.02%), Postives = 43/82 (52.44%), Query Frame = 1 Query: 28 SEEYNILSDFYRATNGSNWFVNTGWLEGEPCGDNDRARGSSSWFGVQCEGGS-----VFTINLQMNGLSGYLPDSIAQLPRL 258 +++ +L++FY+AT G NWF +GWLE E D W GV C V + L+ NGLSG LP S+A L L Sbjct: 22 ADDRAVLTEFYQATGGDNWFERSGWLEAESICD---------WHGVGCRTDETGIERVTRLELEWNGLSGSLPASLASLNEL 94
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: A0A0S4KEC2_BODSA (GP46-like surface antigen, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4KEC2_BODSA) HSP 1 Score: 56.6 bits (135), Expect = 3.340e-6 Identity = 31/86 (36.05%), Postives = 40/86 (46.51%), Query Frame = 1 Query: 22 GYSEEYNILSDFYRATNGSNWFVNTGWLEGEPCGDNDRARGSSSWFGVQC-------EGGSVFTINLQMNGLSGYLPDSIAQLPRL 258 G Y++L +FY AT+GS WF N GW PC S++WFGV C V +I N G LP+S+ L L Sbjct: 44 GCEYRYDVLMEFYNATDGSQWFRNDGWGSLNPC--------STAWFGVTCGTCDTCGTQNDVLSITFNSNSPFGTLPESLGNLSNL 121
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: UPI001EEF7CEE (hypothetical protein n=1 Tax=Nocardioides sp. DJM-14 TaxID=2803368 RepID=UPI001EEF7CEE) HSP 1 Score: 55.1 bits (131), Expect = 1.110e-5 Identity = 32/88 (36.36%), Postives = 43/88 (48.86%), Query Frame = 1 Query: 34 EYNILSDFYRATNGSNWFVNTGWLEGEPCGDNDRARGSSSWFGVQCEGG----SVFTINLQMNGLSGYLPDSIAQLPRLTSFGIFQND 285 E L Y ATNG +W VN GWLEG +W+GV C+G SV+ ++L NGL+G LP + L L + N+ Sbjct: 563 ECEALVALYDATNGPDWRVNDGWLEGAAV---------CAWYGVWCQGDPESRSVWALSLDWNGLAGDLPAQLGDLSELEILSMGGNE 641
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: A0A0S4JHE0_BODSA (GP46-like surface antigen, putative (Fragment) n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JHE0_BODSA) HSP 1 Score: 54.7 bits (130), Expect = 1.520e-5 Identity = 30/79 (37.97%), Postives = 40/79 (50.63%), Query Frame = 1 Query: 28 SEEYNILSDFYRATNGSNWFVNTGWLEGEPCGDNDRARGSSSWFGVQCEGGSVFTINLQMNGLSGYLPDSIAQLPRLTS 264 + + IL + Y + NGS W N+GW G P + S W+GV C G V ++NL N L G LP S L L+S Sbjct: 34 AHRFPILMELYHSANGSLWSANSGW--GSPATEC-----SQDWYGVDCTGNDVRSVNLAGNNLIGSLPPSWGNLTGLSS 105
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Match: A0A1V5PX21_9CHLR (Internalin-A n=1 Tax=Chloroflexi bacterium ADurb.Bin360 TaxID=1852861 RepID=A0A1V5PX21_9CHLR) HSP 1 Score: 53.5 bits (127), Expect = 4.100e-5 Identity = 30/81 (37.04%), Postives = 38/81 (46.91%), Query Frame = 1 Query: 34 EYNILSDFYRATNGSNWFVNTGWL-EGEPCGDNDRARGSSSWFGVQCEGGSVFTINLQMNGLSGYLPDSIAQLPRLTSFGI 273 E L Y T G+NW NT WL PC +W+GV C GSV ++ L N LSG +P I LP+L + Sbjct: 52 ECEALVALYNNTGGANWTNNTDWLVTNTPC----------TWYGVTCAAGSVSSLLLDSNQLSGVIPLEIGNLPQLQQLSL 122 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94078.21711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94078.21711.1 >prot_M-pyrifera_M_contig94078.21711.1 ID=prot_M-pyrifera_M_contig94078.21711.1|Name=mRNA_M-pyrifera_M_contig94078.21711.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=96bp MNGLSGYLPDSIAQLPRLTSFGIFQNDVGGTVPAVLGRMPSLSTLFLSGNback to top mRNA from alignment at M-pyrifera_M_contig94078:73..700+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94078.21711.1 ID=mRNA_M-pyrifera_M_contig94078.21711.1|Name=mRNA_M-pyrifera_M_contig94078.21711.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=628bp|location=Sequence derived from alignment at M-pyrifera_M_contig94078:73..700+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94078:73..700+ >mRNA_M-pyrifera_M_contig94078.21711.1 ID=mRNA_M-pyrifera_M_contig94078.21711.1|Name=mRNA_M-pyrifera_M_contig94078.21711.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=576bp|location=Sequence derived from alignment at M-pyrifera_M_contig94078:73..700+ (Macrocystis pyrifera P11B4 male)back to top |