mRNA_M-pyrifera_M_contig94075.21709.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A4R7I0X2_9ACTN (Putative MFS family arabinose efflux permease n=2 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I0X2_9ACTN) HSP 1 Score: 78.2 bits (191), Expect = 4.040e-13 Identity = 60/231 (25.97%), Postives = 97/231 (41.99%), Query Frame = 1 Query: 1 GFALLTLMAAGSVLSMWRVELPGPVESGAAPLSMAKSIMEGARFGYGSEPLRSLLLISIILGGSFSVMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSGRANLPH-GRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVGCATIVISFSLLVRPAIRKL 690 GF LL + + + + R LP + AA S+ +G R G+EPLRSLL I+ +LG + + + +P + G S A + GM++ SM ++ R G ++ ++ G+AM RTL Q TP +MGRVMGL+ + G+ PI A++ L M ++G + ++ RP +R L Sbjct: 213 GFWLLVVASVLGLAVVSRAPLPDRLIGAAATRG---SVFDGIRIALGTEPLRSLLAITGVLGVAIATSSLLLPEFARDVLGKDSLAASALNVAMSIGMMITSMVLANRWTPSRPGLVLAFFTSVPLGGGLVAIGLSREYAITMLCGFVWGLSGGIAMTVLRTLTQQHTPSELMGRVMGLVAMAQNGAFPITALVLFGLVAATSVSTAMVVIGLLCCALVGLVVARPTVRSL 440
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A848UE30_9ACTN (MFS transporter n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UE30_9ACTN) HSP 1 Score: 77.0 bits (188), Expect = 9.660e-13 Identity = 59/235 (25.11%), Postives = 94/235 (40.00%), Query Frame = 1 Query: 19 LMAAGSVLSMWRVELPG----------PVESGAAPLSMAKSIMEGARFGYGSEPLRSLLLISIILGGSFSVMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSGRANLPH-GRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVGCATIVISFSLLVRPAIRKL 690 + A G W V + G P+ A +I EGAR G+EPLRSLL I+ ++G + + + +P + G S A + GM++ S+ ++ R G ++ + + G+ M RTL Q TP +MGRVMGL + G+ PIGA++ L M I G + + ++ V P +R+L Sbjct: 188 IQAFGVAAGFWLVTIAGLLGAAVFAATPLPGQAPARDRRGAIREGARIALGTEPLRSLLGITAVIGLAIATSTLLLPEFARDVLGTESLAASALNVFMSIGMMITSITIATRWTPSRPGLVLTVFSIVPLGGGLIAIGLSRAYLLTGLFGFMWGLAGGVVMTLLRTLTQVNTPPELMGRVMGLAAMAQNGAFPIGALLLVGLVSATSVSTAMVIAGFLCVACTSAIAVHPHVREL 422
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A2E4RN71_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4RN71_9ACTN) HSP 1 Score: 73.2 bits (178), Expect = 1.980e-11 Identity = 62/231 (26.84%), Postives = 95/231 (41.13%), Query Frame = 1 Query: 1 GFALLTLMAAGSVLSMWRVELPGPVESGAAPLSMAKSIMEGARFGYGSEPLRSLLLISIILGGSFSVMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSGRAN-LPHGRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVGCATIVISFSLLVRPAIRKL 690 GF LL + V+ R +P P E+ A +S A + +EPLRSLL ++ +LG + + +P + + G S A + GM+ SM V+ R GR + + + G+AM RTL+QT TP +MGRVMGL + GS P+ A + +L M I G + +S++ R +R L Sbjct: 181 GFWLLAAASLAGVIIHQRTPIP-PHEASTARQGAIRS---AATIVFRTEPLRSLLALTTVLGIVITASTLLLPEIARDVLGTQSLAASALNVAMSVGMITTSMLVATRWQPARRGRALALATGSAMGTGLVALGLSKNYLLTLFICVCWGLTGGIAMTMMRTLMQTHTPPELMGRVMGLASTAQNGSFPVAAAVLFALVSATSVPTAMVITGVLCSMAVWSIVFRRTVRDL 407
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A6I4Z814_9CHLR (MFS transporter n=7 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4Z814_9CHLR) HSP 1 Score: 73.2 bits (178), Expect = 2.080e-11 Identity = 76/243 (31.28%), Postives = 109/243 (44.86%), Query Frame = 1 Query: 1 GFALLT--------LMAAGSVLSM----WRVELPGPVESGAAPLSMAKSIMEGARFGYGSEPLRSLLLISIILGGSFS-VMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSGRANLPHGRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVGCATIVISFSLLVRPAIRKL 690 GFA LT L+AAG++L + +R E P A P S+ + EG R+ S + LL++S +LG F + ++M +VE + G++ A FGAGM+V S ++ R LP +++ A + M L+Q TPQA+MGRVMG+ +L FA S+PIG LA + GPQ + A V LLV IRKL Sbjct: 189 GFAGLTAAFSLETGLLAAGALLFLMLRKYRPEAP------AEPGSIRGDLTEGLRYVVRSRAILGLLILSAMLGIFFGGPITVTMLLIVEDVLKLGDHWVGILFAAFGAGMIVSSGVMTLRP-LPQRGLLVALSPVLAAPPLVLFGLSETPWLTVVALLAIGPPAAIFMNLSLALLQENTPQAVMGRVMGVYSLMFAASMPIGIAQTGLLASLWGPQVAIVASSIAGGVAGLLLLVWSPIRKL 424
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A521KI73_9CHLR (MFS transporter n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A521KI73_9CHLR) HSP 1 Score: 65.5 bits (158), Expect = 5.870e-9 Identity = 60/214 (28.04%), Postives = 92/214 (42.99%), Query Frame = 1 Query: 4 FALLTLMAAGSVLSMWRVELPGPVESGAAPLSMAKSIMEGARFGYGSEPLRSLLLISIILG----GSFSVMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSGRANLPHGRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVG 633 FA+L + +M V LP S MA + EG RF + LRSL++ S+I G G V+ + R E ++ G + L+LA G GM V S+ + R + + + G+ + ++TLIQT TP AMMGRVM + +L AG +P+G+++ A V+G R + G Sbjct: 72 FAVLAVGYLVGGAAMLGVHLPAAAPSTTVRPRMADAAREGMRFVFSDRALRSLVIFSVISGLFMLGPTFVLIPEIGR--EKLHVGPGPNS-LLLALLGVGMFVMSLFLLTRREVHRKGNWFVVNLLFAGPLMVLTGWSTSYWFTAVVMALWGLGGGVYVNLNQTLIQTNTPNAMMGRVMSIYSLSIAGIIPLGSLLAGGGAAVIGADRYQMLSG 282
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A538SJN4_9BACT (MFS transporter n=1 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A538SJN4_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 6.680e-9 Identity = 56/198 (28.28%), Postives = 87/198 (43.94%), Query Frame = 1 Query: 37 VLSMWRVELPGPVESGAAPLSMAKSIMEGARFGYGSEPLRSLL-LISIILGGSFSVMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSGRANLPHGRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVG-PQRTMT 624 ++S+WR++LP P ++++EG R+ PLR+LL L+ + G F M I +P I G + GL+++ FG G L ++ ++ + + R L L + + TLIQ TT GRVMGL TL F G+ PIGA++ ++A G P T T Sbjct: 200 IVSIWRMDLPPKPHIPFVPRRAVETMLEGLRYVKSVPPLRNLLTLLGVTAGLGFQYM-ILLPVYARDILNGGAKGYGLLVSAFGLGSLASAVIMTRKLDRWALRRNLFFGLMTGAIGMGTFAWSHTIWLSLAMGFLAGFGLILYVATTNTLIQITTEDRYRGRVMGLYTLMFVGTAPIGALVAGTIAEHFGAPVATST 396
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A3N5G704_9BACT (MFS transporter n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5G704_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 4.560e-7 Identity = 57/220 (25.91%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 37 VLSMWRVELPGPVESGAAPLSMAKSIMEGARFGYGSEPLRSLLL---ISIILGGSFSVMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSGRANLPHGRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVGCATIVISFSLLVR-PAIR 684 + S++ + L P + A S SI+EG +F + P+R+LLL +S ++G ++V+ MP + I G + G+++AT GAG L+G++ ++ R N+ + + + + TLIQ P + GRVM ++ F G P GA++ +LA +G T+ + G A ++ S R PA+R Sbjct: 184 IASLFAMRLTPPAQR-AKDESALHSIVEGFQFVARTAPIRALLLMVALSSVMGLPYTVL---MPIFADQILQGGAGGYGVLMATSGAGALIGALTLASRTNVRGLGTWVAVATAAFGLSLIMFSISRVFWLSALLLVPVGYFLMVQLAASITLIQAMVPNRLRGRVMAAYSMMFFGMSPFGALLSGALAGPLGAPMTVALGGLACVLGSLVFGARLPALR 399
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A6I4ZMC9_9CHLR (MFS transporter n=4 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZMC9_9CHLR) HSP 1 Score: 60.1 bits (144), Expect = 6.200e-7 Identity = 61/240 (25.42%), Postives = 108/240 (45.00%), Query Frame = 1 Query: 4 FALLTLMAAGSVLSMWRVELPG----PVESGAAPLS-MAKSIMEGARFGYGSEPLRSL----LLISIILGGSFSVMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSG-RANLPHGRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVGCATIVI-SFSLLVRPAIRKL 690 FAL ++ ++ + + +P PV + + L MA I+EG RF ++ +RSL L+ S+++ G + + +PRV + A + A G G+ S+A++ + +L + I ++AG+ + TLIQ+ TPQ +MGRVM + TL G P+G ++ A VG R +I G A++ + +F LL +R++ Sbjct: 201 FALQAILMGAGLIFIVPLRIPARALDPVTAAGSGLRVMATDIVEGFRFIVRNDNIRSLFVLLLVTSLVINGPWVTL---LPRVAQLQLDADGPAASWLFAYLGIGLTCSSLALASLQGSLRNAGGWFICALMTSSTFAIIIGFSHSYLLTALLLSLTGLSAGVFTNLNLTLIQSYTPQPVMGRVMAIFTLIMLGGTPLGGLLGGLGAEWVGAGRWFSICGVASVAVGAFFLLTNAGLRRM 437
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A7X3V6Q5_9CHLR (MFS transporter n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3V6Q5_9CHLR) HSP 1 Score: 59.7 bits (143), Expect = 8.290e-7 Identity = 56/240 (23.33%), Postives = 107/240 (44.58%), Query Frame = 1 Query: 4 FALLTLMAAGSVLSMWRVELPG-----PVESGAAPLSMAKSIMEGARFGYGSEPLRSLLLI----SIILGGSFSVMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSG-RANLPHGRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVGCATIVI-SFSLLVRPAIRKL 690 FAL ++ +L + + +P + +G+A MA ++EG RF S+ +RSL ++ S+++ G + + +PRV + A + G G+ S+A++ R+ L + ++AG+ + TLIQ+ TPQ +MGRVM + TL G P+G ++ A +G + ++ G A++ + + LL +P +R++ Sbjct: 193 FALQAILMGAGLLFLIPLRIPARALTPAIAAGSALRVMAADLVEGFRFIVSSDNMRSLFILLLVTSLVINGPWVTL---LPRVAQLQLDADGPAASWLFVFLGMGLTCSSLALASLRSGLRNAGGWFTCALMTSSAFAIVIGFSHSYLLTALLLSLTGLSAGVFSNLNLTLIQSYTPQPVMGRVMAIFTLIMLGGTPVGGLLGGLGAAWLGAGQWFSLCGAASVAVGAVFLLTQPKLRRM 429
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Match: A0A6I4ZC86_9CHLR (MFS transporter n=3 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZC86_9CHLR) HSP 1 Score: 59.3 bits (142), Expect = 1.100e-6 Identity = 70/233 (30.04%), Postives = 105/233 (45.06%), Query Frame = 1 Query: 4 FALLT-LMAAGSVL--SMWRVELPGPVESGAAPLSMAKSIMEGARFGYGSEPLRSLLLISIILGGSFS-VMQISMPRVVETIYGGTSSQAGLVLATFGAGMLVGSMAVSGRANLPHGRIVLIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAGLAMVSHRTLIQTTTPQAMMGRVMGLMTLGFAGSLPIGAVIQASLAPVVGPQRTMTIVGCATIVISFSLLVRPAIRKL 690 FAL T L+A G+VL + R E P VE + + EG R+ GS + LL+++ + G ++ +Q++M +VE + S G++ FGAGM V S+ ++ R LP ++L A + M L+Q T Q +MGRVMG+ +L F S PIG A ++ + GPQ + A VI LLV +RKL Sbjct: 203 FALQTGLLALGAVLFLGIGRYE-PRAVER----RDVRADLGEGLRYVRGSRNIIGLLVLAAMPGVFYAGPLQVNMLLIVEDVLELPPSWLGILFGAFGAGMFVSSLLMTLRP-LPKRGLLLALSPVLGGPVLALFGLSEAAWLSVLLLIAIGPFAAIFMNLSLALLQEQTEQVVMGRVMGVYSLMFVISSPIGFAQTALVSSLFGPQVSTVASALAGSVIGVVLLVWLPVRKL 429 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94075.21709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94075.21709.1 >prot_M-pyrifera_M_contig94075.21709.1 ID=prot_M-pyrifera_M_contig94075.21709.1|Name=mRNA_M-pyrifera_M_contig94075.21709.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp MAAGSVLSMWRVELPGPVESGAAPLSMAKSIMEGARFGYGSEPLRSLLLIback to top mRNA from alignment at M-pyrifera_M_contig94075:7..699+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94075.21709.1 ID=mRNA_M-pyrifera_M_contig94075.21709.1|Name=mRNA_M-pyrifera_M_contig94075.21709.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=693bp|location=Sequence derived from alignment at M-pyrifera_M_contig94075:7..699+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94075:7..699+ >mRNA_M-pyrifera_M_contig94075.21709.1 ID=mRNA_M-pyrifera_M_contig94075.21709.1|Name=mRNA_M-pyrifera_M_contig94075.21709.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1344bp|location=Sequence derived from alignment at M-pyrifera_M_contig94075:7..699+ (Macrocystis pyrifera P11B4 male)back to top |