mRNA_M-pyrifera_M_contig94023.21704.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig94023.21704.1
Unique NamemRNA_M-pyrifera_M_contig94023.21704.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A7K1Z7S7_9ACTN (Amidohydrolase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z7S7_9ACTN)

HSP 1 Score: 489 bits (1259), Expect = 2.140e-172
Identity = 221/248 (89.11%), Postives = 236/248 (95.16%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            GMLIAYPP++ EEY+RR+AGI+AHNRWLKDW D YPAQRCGLPQIFLE+IDDAI+TLEWAA EGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAV DLDLVMTQHGGNGTPNYG+DPASGLIFLMEVPFFAHRNL+HLIMSGVFERFP LKYVMTEQGTAWA++EL RMD YH QIS GRVGELGFSAD+VLPMKPSEYFDRNVWIGASFPSP EAEAI+TLGVHKVMWGSDYPHHEGTYPFS+ +LQR
Sbjct:   87 GMLIAYPPRSREEYERRKAGIEAHNRWLKDWCDLYPAQRCGLPQIFLEDIDDAISTLEWAAAEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVTDLDLVMTQHGGNGTPNYGSDPASGLIFLMEVPFFAHRNLAHLIMSGVFERFPALKYVMTEQGTAWAIEELRRMDAYHMQISAGRVGELGFSADVVLPMKPSEYFDRNVWIGASFPSPAEAEAIRTLGVHKVMWGSDYPHHEGTYPFSLEALQR 334          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A2E8L919_9ACTN (Amidohydrolase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L919_9ACTN)

HSP 1 Score: 441 bits (1133), Expect = 3.620e-153
Identity = 197/248 (79.44%), Postives = 218/248 (87.90%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            G L+A  PKN  E+ RR+AG+  HNRWL DW  +YP QR GLPQIFLE++DDA+ TL WAA EGF+SF+MPHVAPDVDLPGLWSP WDRLWAAVQDLDLV+TQHGGNGTP+YG DPASG+IFLMEVPFFAHRNL+HL MSGVFERFP LKYVMTEQG AWAV+EL RMD YH Q+  GRVGELGFSADIVLP+KPSEYFDRNVWIGASFPSPGEAEA+K LG HK+MWGSDYPHHEGTYP+S  SL+R
Sbjct:   91 GALLARSPKNSGEFGRRKAGLQCHNRWLSDWCSKYPDQRRGLPQIFLEDLDDAVKTLTWAANEGFKSFLMPHVAPDVDLPGLWSPEWDRLWAAVQDLDLVVTQHGGNGTPDYGKDPASGVIFLMEVPFFAHRNLAHLTMSGVFERFPNLKYVMTEQGVAWAVEELRRMDAYHAQMKHGRVGELGFSADIVLPLKPSEYFDRNVWIGASFPSPGEAEAMKQLGTHKIMWGSDYPHHEGTYPYSTESLRR 338          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A6B0WJY6_9ACTN (Amidohydrolase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WJY6_9ACTN)

HSP 1 Score: 418 bits (1075), Expect = 2.620e-144
Identity = 184/248 (74.19%), Postives = 212/248 (85.48%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            G LIA PP +  +Y+RR AGI AHNRWL+DW   YP QRCGLPQIF E++DDA+ TLEWAA EGFRSF++PHV PD +LPG W   WDRLWAA  DLDL+MTQHGGNG P+YG  PA+G++FLMEVPF++HRNL+HLIMSGVFERFP L+YVMTEQG AW V+EL RMD YH Q+  GRVGELGF+ADIVLP+KP+EYFDRNVWIGASFPSPGEA AI+ +GVHKVMWGSDYPHHEGTYP+S+ SLQR
Sbjct:   94 GSLIARPPSDRADYERRFAGITAHNRWLRDWCARYPDQRCGLPQIFAEDLDDAVATLEWAAAEGFRSFLLPHVPPDSELPGYWDHRWDRLWAAAADLDLIMTQHGGNGGPDYGKAPAAGVVFLMEVPFYSHRNLAHLIMSGVFERFPTLRYVMTEQGVAWLVEELRRMDGYHRQMRHGRVGELGFAADIVLPLKPTEYFDRNVWIGASFPSPGEAAAIRKVGVHKVMWGSDYPHHEGTYPYSLESLQR 341          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A3M2H5R4_ACTSX (Amidohydrolase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H5R4_ACTSX)

HSP 1 Score: 416 bits (1069), Expect = 1.810e-143
Identity = 189/248 (76.21%), Postives = 214/248 (86.29%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            GMLIA PP++  EY+RR AGI AHNRWL+DW   +P +R GLPQIFLE++DDAI TLEWAA EGF SFM+PHVAPD  LPGLWSPH+DRLWAAVQDLDLVMTQHGGNG P+YG+DPAS L+FLMEV FFA+RNL HLIMSGVFERFP+L+YVMTEQG  WAV+ L RMD YH Q+  GRVGELGF A++VLPMKPSEYF+RNVWIGASFPSP E  AI+ LGVHKVMWGSDYPHHEGTYP++  SL+R
Sbjct:   89 GMLIARPPRDRAEYERRHAGIQAHNRWLRDWCGAHPERRRGLPQIFLEDLDDAIRTLEWAAAEGFTSFMLPHVAPDQGLPGLWSPHYDRLWAAVQDLDLVMTQHGGNGAPDYGDDPASTLMFLMEVGFFANRNLWHLIMSGVFERFPRLRYVMTEQGVGWAVEALRRMDGYHRQMKSGRVGELGFPAELVLPMKPSEYFERNVWIGASFPSPREVAAIRELGVHKVMWGSDYPHHEGTYPYTRESLRR 336          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A2E6UN04_9ACTN (Amidohydrolase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6UN04_9ACTN)

HSP 1 Score: 397 bits (1020), Expect = 5.560e-136
Identity = 173/248 (69.76%), Postives = 206/248 (83.06%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            G LI YPP    +Y+RR AGI  HNRWL DW + +P +RCGLPQ+FL ++DD I  LEWAA  GFRSFM+P + PD  +PGLW PH+DRLW+AV+DLDL +TQHGG+G PNYG  PAS L+FL+EVPFFAHRNL HLIMSGVFERFP+L++VMTEQG  W +++L RMD YH Q+S GRVGELGF+A++VLPMKPSEYFDRNVWIGASFPSP EAEAI+ +GVHKVMWG+DYPHHEGT+P S  SL+R
Sbjct:   92 GALITYPPTERADYERRLAGIRTHNRWLLDWCNAHPERRCGLPQVFLNDLDDTIVDLEWAAENGFRSFMLPAIPPDQGIPGLWDPHYDRLWSAVRDLDLTITQHGGSGGPNYGEAPASTLMFLLEVPFFAHRNLGHLIMSGVFERFPELRFVMTEQGVGWVLEDLRRMDGYHAQMSSGRVGELGFAAELVLPMKPSEYFDRNVWIGASFPSPSEAEAIRQVGVHKVMWGNDYPHHEGTFPHSRESLRR 339          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A2E0ZR28_9ACTN (Amidohydrolase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0ZR28_9ACTN)

HSP 1 Score: 378 bits (970), Expect = 1.040e-128
Identity = 166/248 (66.94%), Postives = 198/248 (79.84%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            G LI YP  +  EY+RR  GI  HNRWL DW   YP +RCGLPQ+FL ++DD I  LEW A  GFRSFM+P + PD+ +PG W P +DRLW+AV+DLDL +TQHGG+G P+YG  P + L++LMEVPFFA RNLSHLIMSGVFERFP+L++VMTEQG AW +D+L RMD YH Q+S GRVGELGF  D+VLPMKPSEYFDRNVWIGASFPSP EA AI+ +GVH VMWG+DYPH+EGT+P S  SL+R
Sbjct:   70 GTLITYPATDRAEYERRLVGIRTHNRWLLDWCAGYPERRCGLPQVFLNDLDDTIADLEWTAENGFRSFMLPAIPPDMGIPGFWDPIYDRLWSAVRDLDLTITQHGGSGGPDYGKAPTATLMYLMEVPFFAQRNLSHLIMSGVFERFPELRFVMTEQGVAWVLDDLRRMDGYHAQMSSGRVGELGFDGDLVLPMKPSEYFDRNVWIGASFPSPSEAAAIREVGVHNVMWGNDYPHNEGTFPHSRESLRR 317          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A7C7WWE0_9ACTN (Amidohydrolase n=4 Tax=root TaxID=1 RepID=A0A7C7WWE0_9ACTN)

HSP 1 Score: 375 bits (963), Expect = 2.270e-127
Identity = 167/248 (67.34%), Postives = 201/248 (81.05%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            G LI YP  +  EY+RR  GI  HNRWL DW   +P +RCGLPQ+FL ++DD I  L  AA  GFRSFM+P V PD  +PGL+ P +DRLWA  +DLDLV+TQHGG+G P+YG+ PA+ L++L+EVPFFAHRNLSHLIMSGVFERFP+LKYVMTEQG AW +++L RMD YH Q+S GRVGELGF A++VLP KPSEYFDRNVWIGASFPSP EAEAI+ +G+HKVMWGSDYPHHEGT+P++   L+R
Sbjct:   87 GALITYPATDRTEYERRLEGIRTHNRWLVDWCAAFPERRCGLPQVFLNDLDDTIADLHLAAENGFRSFMLPAVPPDSGMPGLYHPVYDRLWAVCRDLDLVVTQHGGSGNPSYGDAPAATLMYLLEVPFFAHRNLSHLIMSGVFERFPELKYVMTEQGVAWVLEDLRRMDGYHRQMSSGRVGELGFPAELVLPHKPSEYFDRNVWIGASFPSPSEAEAIRQVGIHKVMWGSDYPHHEGTFPYNRVHLRR 334          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A381QS57_9ZZZZ (Amidohydro-rel domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381QS57_9ZZZZ)

HSP 1 Score: 365 bits (938), Expect = 1.560e-123
Identity = 161/248 (64.92%), Postives = 198/248 (79.84%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            G LI YPP N  +Y RR  G+  HNRWLKDW   +P +RCGLPQ+FL ++DD I  LE AA  G  SFM+P V PD   PGL+ P +DRLWAA +DLDL +TQHGG+G PNYG+ PA+GL+FL+EVPFFAHRNLSHLIMSGVF RFP+L+YVMTEQG AW +++L RMD YH Q++ GRVGELGFSAD+VLP +PSEYF RNVWIGASFPSP EA+A+K +G+ ++MWGSDYPH+E T+P++   L+R
Sbjct:   92 GALITYPPTNRPDYDRRLEGVRTHNRWLKDWCAAHPERRCGLPQVFLFDLDDTIADLELAAENGHSSFMLPAVPPDSGTPGLYDPVYDRLWAACRDLDLTITQHGGSGNPNYGDTPAAGLMFLLEVPFFAHRNLSHLIMSGVFNRFPELRYVMTEQGVAWVLEDLRRMDGYHAQMASGRVGELGFSADLVLPDRPSEYFARNVWIGASFPSPSEADAMKKVGIERMMWGSDYPHNESTFPYNRDHLRR 339          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A3D5GLJ3_9ACTN (Amidohydrolase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5GLJ3_9ACTN)

HSP 1 Score: 363 bits (933), Expect = 8.920e-123
Identity = 160/248 (64.52%), Postives = 197/248 (79.44%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            G LI YPP N  +Y+RR  GI  HNRWL D+   YP +RCGLPQ+FL ++DD I  LE AA  G  SFM+P V PD  LPGL+ P +DRLW A++DLDL +TQHGG+G PNYG  PA+ L+FL+EVPFFAHRNLSHL+MSGVFERFP+L+YVMTEQG  W +++L RMD YH Q++ GRVGELGF+A++VLP KPSEYF RNVWIGASFPSP EAEA++T+G+ + MWGSDYPH+EGT+P +   L+R
Sbjct:   92 GALITYPPTNRVDYERRLEGIRTHNRWLVDFCAAYPERRCGLPQVFLFDLDDTIADLELAAANGHSSFMLPAVPPDSGLPGLYDPVYDRLWGAIRDLDLTVTQHGGSGNPNYGESPAASLMFLLEVPFFAHRNLSHLVMSGVFERFPELRYVMTEQGVGWVIEDLRRMDGYHAQMASGRVGELGFAAELVLPDKPSEYFARNVWIGASFPSPSEAEAMRTVGIDRTMWGSDYPHNEGTFPHNREHLRR 339          
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Match: A0A3D5K2G7_9ACTN (Amidohydrolase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K2G7_9ACTN)

HSP 1 Score: 350 bits (897), Expect = 2.190e-117
Identity = 154/248 (62.10%), Postives = 196/248 (79.03%), Query Frame = 1
Query:    1 GMLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENIDDAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVMTQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKYVMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDRNVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR 744
            G LI YP  + +EY+RR  GI  HNRWL D+   +P +RCGLPQ+FL ++DD I  LE AA  G  SFM+P V PD  +PGL+ P +DR+WAA +DLDL +TQHGG+G P+YG+ PA+ L+FL+EVPFFAHRNLSHLIMSGVF+RFP+L+YVMTEQG  W +++L RMD YH Q++ GRVGELGF A++VLP KPS+YF RNVWIGASFPSP EA A+K +GV ++MWGSDYPH+E T+P++   L+R
Sbjct:   87 GALITYPATDRDEYERRLEGIRTHNRWLADFCAAHPERRCGLPQVFLNDLDDTIADLELAAANGHSSFMLPAVPPDSGMPGLYHPVYDRVWAACRDLDLTITQHGGSGNPSYGDAPAASLMFLLEVPFFAHRNLSHLIMSGVFDRFPELRYVMTEQGVGWVIEDLRRMDGYHAQMASGRVGELGFPAELVLPDKPSDYFARNVWIGASFPSPSEASAMKKVGVDRMMWGSDYPHNESTFPYNRLHLRR 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94023.21704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1Z7S7_9ACTN2.140e-17289.11Amidohydrolase n=2 Tax=Acidimicrobiaceae bacterium... [more]
A0A2E8L919_9ACTN3.620e-15379.44Amidohydrolase n=5 Tax=Acidimicrobiaceae bacterium... [more]
A0A6B0WJY6_9ACTN2.620e-14474.19Amidohydrolase n=7 Tax=Acidimicrobiaceae bacterium... [more]
A0A3M2H5R4_ACTSX1.810e-14376.21Amidohydrolase n=1 Tax=Actinomyces sp. TaxID=29317... [more]
A0A2E6UN04_9ACTN5.560e-13669.76Amidohydrolase n=1 Tax=Acidimicrobiaceae bacterium... [more]
A0A2E0ZR28_9ACTN1.040e-12866.94Amidohydrolase n=1 Tax=Acidimicrobiaceae bacterium... [more]
A0A7C7WWE0_9ACTN2.270e-12767.34Amidohydrolase n=4 Tax=root TaxID=1 RepID=A0A7C7WW... [more]
A0A381QS57_9ZZZZ1.560e-12364.92Amidohydro-rel domain-containing protein n=1 Tax=m... [more]
A0A3D5GLJ3_9ACTN8.920e-12364.52Amidohydrolase n=6 Tax=Acidimicrobiaceae bacterium... [more]
A0A3D5K2G7_9ACTN2.190e-11762.10Amidohydrolase n=1 Tax=Acidimicrobiaceae bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94023contigM-pyrifera_M_contig94023:2..745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score261.2
Seed ortholog evalue5.1e-67
Seed eggNOG ortholog1123320.KB889697_gene8995
Hectar predicted targeting categoryother localisation
EggNOG free text desc.amidohydrolase
EggNOG OGs2GP2D@201174,COG2159@1,COG2159@2
COG Functional cat.S
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size744
Cds size741
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816853.6793616-CDS-M-pyrifera_M_contig94023:1..7421622816853.6793616-CDS-M-pyrifera_M_contig94023:1..742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94023 2..742 -
1692278217.3318045-CDS-M-pyrifera_M_contig94023:1..7421692278217.3318045-CDS-M-pyrifera_M_contig94023:1..742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig94023 2..742 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816853.6931043-UTR-M-pyrifera_M_contig94023:742..7451622816853.6931043-UTR-M-pyrifera_M_contig94023:742..745Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig94023 743..745 -
1692278217.348686-UTR-M-pyrifera_M_contig94023:742..7451692278217.348686-UTR-M-pyrifera_M_contig94023:742..745Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig94023 743..745 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94023.21704.1prot_M-pyrifera_M_contig94023.21704.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig94023 2..742 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig94023.21704.1

>prot_M-pyrifera_M_contig94023.21704.1 ID=prot_M-pyrifera_M_contig94023.21704.1|Name=mRNA_M-pyrifera_M_contig94023.21704.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp
MLIAYPPKNDEEYQRRRAGIDAHNRWLKDWVDEYPAQRCGLPQIFLENID
DAITTLEWAAVEGFRSFMMPHVAPDVDLPGLWSPHWDRLWAAVQDLDLVM
TQHGGNGTPNYGNDPASGLIFLMEVPFFAHRNLSHLIMSGVFERFPQLKY
VMTEQGTAWAVDELNRMDMYHTQISGGRVGELGFSADIVLPMKPSEYFDR
NVWIGASFPSPGEAEAIKTLGVHKVMWGSDYPHHEGTYPFSVPSLQR
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mRNA from alignment at M-pyrifera_M_contig94023:2..745-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig94023.21704.1 ID=mRNA_M-pyrifera_M_contig94023.21704.1|Name=mRNA_M-pyrifera_M_contig94023.21704.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig94023:2..745- (Macrocystis pyrifera P11B4 male)
GGCATGCTCATCGCGTATCCGCCGAAGAACGACGAGGAGTATCAGCGTCG CCGGGCCGGCATCGATGCCCACAACCGTTGGCTCAAGGATTGGGTCGACG AGTATCCGGCCCAGCGTTGCGGCCTGCCCCAGATCTTCCTCGAGAACATC GATGACGCGATCACCACGCTCGAGTGGGCCGCTGTGGAAGGCTTCCGCAG TTTCATGATGCCCCACGTCGCACCCGACGTAGATCTGCCCGGCTTGTGGT CACCACACTGGGACCGGCTCTGGGCCGCGGTCCAGGACCTCGACCTGGTG ATGACCCAGCACGGCGGCAACGGCACGCCGAACTACGGCAACGACCCGGC GTCGGGCCTCATCTTCTTGATGGAGGTTCCCTTCTTCGCCCACCGCAACC TCTCGCACCTCATCATGAGCGGCGTCTTCGAACGCTTCCCCCAGCTGAAG TATGTGATGACCGAACAGGGCACCGCCTGGGCGGTCGACGAGCTCAATCG CATGGACATGTACCACACGCAGATCTCCGGCGGCCGCGTCGGTGAGCTCG GCTTCTCCGCCGACATCGTGTTGCCGATGAAGCCGAGCGAGTACTTCGAC CGCAACGTGTGGATCGGCGCGTCGTTCCCCTCGCCGGGCGAGGCCGAGGC GATCAAGACGCTCGGGGTGCACAAGGTGATGTGGGGCTCGGACTATCCCC ATCACGAGGGCACCTATCCGTTCTCGGTTCCGTCGCTCCAGCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig94023:2..745-

>mRNA_M-pyrifera_M_contig94023.21704.1 ID=mRNA_M-pyrifera_M_contig94023.21704.1|Name=mRNA_M-pyrifera_M_contig94023.21704.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig94023:2..745- (Macrocystis pyrifera P11B4 male)
ATGCTCATCGCGTATCCGCCGAAGAACGACGAGGAGTATCAGCGTCGCCG
GGCCGGCATCGATGCCCACAACCGTTGGCTCAAGGATTGGGTCGACGAGT
ATCCGGCCCAGCGTTGCGGCCTGCCCCAGATCTTCCTCGAGAACATCGAT
GACGCGATCACCACGCTCGAGTGGGCCGCTGTGGAAGGCTTCCGCAGTTT
CATGATGCCCCACGTCGCACCCGACGTAGATCTGCCCGGCTTGTGGTCAC
CACACTGGGACCGGCTCTGGGCCGCGGTCCAGGACCTCGACCTGGTGATG
ACCCAGCACGGCGGCAACGGCACGCCGAACTACGGCAACGACCCGGCGTC
GGGCCTCATCTTCTTGATGGAGGTTCCCTTCTTCGCCCACCGCAACCTCT
CGCACCTCATCATGAGCGGCGTCTTCGAACGCTTCCCCCAGCTGAAGTAT
GTGATGACCGAACAGGGCACCGCCTGGGCGGTCGACGAGCTCAATCGCAT
GGACATGTACCACACGCAGATCTCCGGCGGCCGCGTCGGTGAGCTCGGCT
TCTCCGCCGACATCGTGTTGCCGATGAAGCCGAGCGAGTACTTCGACCGC
AACGTGTGGATCGGCGCGTCGTTCCCCTCGCCGGGCGAGGCCGAGGCGAT
CAAGACGCTCGGGGTGCACAAGGTGATGTGGGGCTCGGACTATCCCCATC
ACGAGGGCACCTATCCGTTCTCGGTTCCGTCGCTCCAGCGCATGCTCATC
GCGTATCCGCCGAAGAACGACGAGGAGTATCAGCGTCGCCGGGCCGGCAT
CGATGCCCACAACCGTTGGCTCAAGGATTGGGTCGACGAGTATCCGGCCC
AGCGTTGCGGCCTGCCCCAGATCTTCCTCGAGAACATCGATGACGCGATC
ACCACGCTCGAGTGGGCCGCTGTGGAAGGCTTCCGCAGTTTCATGATGCC
CCACGTCGCACCCGACGTAGATCTGCCCGGCTTGTGGTCACCACACTGGG
ACCGGCTCTGGGCCGCGGTCCAGGACCTCGACCTGGTGATGACCCAGCAC
GGCGGCAACGGCACGCCGAACTACGGCAACGACCCGGCGTCGGGCCTCAT
CTTCTTGATGGAGGTTCCCTTCTTCGCCCACCGCAACCTCTCGCACCTCA
TCATGAGCGGCGTCTTCGAACGCTTCCCCCAGCTGAAGTATGTGATGACC
GAACAGGGCACCGCCTGGGCGGTCGACGAGCTCAATCGCATGGACATGTA
CCACACGCAGATCTCCGGCGGCCGCGTCGGTGAGCTCGGCTTCTCCGCCG
ACATCGTGTTGCCGATGAAGCCGAGCGAGTACTTCGACCGCAACGTGTGG
ATCGGCGCGTCGTTCCCCTCGCCGGGCGAGGCCGAGGCGATCAAGACGCT
CGGGGTGCACAAGGTGATGTGGGGCTCGGACTATCCCCATCACGAGGGCA
CCTATCCGTTCTCGGTTCCGTCGCTCCAGCGC
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