mRNA_M-pyrifera_M_contig93990.21691.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93990.21691.1
Unique NamemRNA_M-pyrifera_M_contig93990.21691.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: UPI001C41B710 (gem-associated protein 5 n=1 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C41B710)

HSP 1 Score: 149 bits (377), Expect = 1.340e-37
Identity = 85/244 (34.84%), Postives = 130/244 (53.28%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGLGKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTP-------AGEARHLLYSCAADGKIMVSDEQESDAASKNLHESVAPS--LAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
            LG  S G  HSR +F ++      +E  +S SMDR++  W  +S    W +P LGG  Y +AFSP+    LA+ VGD  + +W+  +           + +R  W+G+++K TALAWHP++EG LAF  +DG++G+ DVFS +   + +S HR  VY L W  P       AG+A H LYSC  +G I+  D       + ++   +  S  +   L+  +D SW  DG+ +A+    G V V+
Sbjct:  306 LGTSSDGQNHSRIVFNMSSVLQDDRELLISTSMDREIKCWDLSSLDCCWTLPTLGGFVYKLAFSPVGAGCLALGVGDNMIRVWNTLTTQNQ-------YDTRSFWQGIKSKVTALAWHPKKEGSLAFGTDDGKVGIYDVFSNKPPQVSSSYHRRTVYTLAWGPPVPPMTSVAGKACHSLYSCGGEGVILQHDPARLSGDASDVDSLIRDSNNIRHKLSPHTDLSWKPDGKVVAIGNEDGCVDVY 542          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: A0A673C9L1_9TELE (Gem (nuclear organelle) associated protein 5 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673C9L1_9TELE)

HSP 1 Score: 149 bits (375), Expect = 2.470e-37
Identity = 85/247 (34.41%), Postives = 133/247 (53.85%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGL-GKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTPA---------GEARHLLYSCAADGKIMVSDEQESDAASKNLHESVAPS--LAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
             G  S G  HSR +F  +  +   G+E  +S SMDR++  W  AS    W +P LGG  YA+ FSP+    LA+ VGD  + +W+  +           + +RL W+G+++K TALAWHPRREG LAF  +DG++G+ DVFS +   + +S HR  VY L W  P          G+A + LYSCA +G I+  D  +    + ++ + +  +  +   L+  +D SW  DG+ +A+    G + ++
Sbjct:  309 FGTSSEGQNHSRIVFNTSLVQLQDGRELLISTSMDREVKCWDLASLDCCWTLPTLGGFVYALTFSPVGVGCLALGVGDNMIRVWNTLTTQNQ-------YDTRLFWQGIKSKVTALAWHPRREGSLAFGTDDGKVGIYDVFSNKPPQISSSYHRKTVYTLAWGPPVPPMSFGAAEGKAAYSLYSCAGEGIILQHDPYKLSGEASDIDKLIKDTNNIQHKLSPHTDLSWKPDGKVVAIGNEDGCIDIY 548          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: A0A673CCU8_9TELE (Gem (nuclear organelle) associated protein 5 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CCU8_9TELE)

HSP 1 Score: 149 bits (375), Expect = 2.480e-37
Identity = 85/247 (34.41%), Postives = 133/247 (53.85%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGL-GKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTPA---------GEARHLLYSCAADGKIMVSDEQESDAASKNLHESVAPS--LAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
             G  S G  HSR +F  +  +   G+E  +S SMDR++  W  AS    W +P LGG  YA+ FSP+    LA+ VGD  + +W+  +           + +RL W+G+++K TALAWHPRREG LAF  +DG++G+ DVFS +   + +S HR  VY L W  P          G+A + LYSCA +G I+  D  +    + ++ + +  +  +   L+  +D SW  DG+ +A+    G + ++
Sbjct:  303 FGTSSEGQNHSRIVFNTSLVQLQDGRELLISTSMDREVKCWDLASLDCCWTLPTLGGFVYALTFSPVGVGCLALGVGDNMIRVWNTLTTQNQ-------YDTRLFWQGIKSKVTALAWHPRREGSLAFGTDDGKVGIYDVFSNKPPQISSSYHRKTVYTLAWGPPVPPMSFGAAEGKAAYSLYSCAGEGIILQHDPYKLSGEASDIDKLIKDTNNIQHKLSPHTDLSWKPDGKVVAIGNEDGCIDIY 542          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: A0A673CB35_9TELE (Gem (nuclear organelle) associated protein 5 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CB35_9TELE)

HSP 1 Score: 149 bits (375), Expect = 2.480e-37
Identity = 85/247 (34.41%), Postives = 133/247 (53.85%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGL-GKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTPA---------GEARHLLYSCAADGKIMVSDEQESDAASKNLHESVAPS--LAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
             G  S G  HSR +F  +  +   G+E  +S SMDR++  W  AS    W +P LGG  YA+ FSP+    LA+ VGD  + +W+  +           + +RL W+G+++K TALAWHPRREG LAF  +DG++G+ DVFS +   + +S HR  VY L W  P          G+A + LYSCA +G I+  D  +    + ++ + +  +  +   L+  +D SW  DG+ +A+    G + ++
Sbjct:  300 FGTSSEGQNHSRIVFNTSLVQLQDGRELLISTSMDREVKCWDLASLDCCWTLPTLGGFVYALTFSPVGVGCLALGVGDNMIRVWNTLTTQNQ-------YDTRLFWQGIKSKVTALAWHPRREGSLAFGTDDGKVGIYDVFSNKPPQISSSYHRKTVYTLAWGPPVPPMSFGAAEGKAAYSLYSCAGEGIILQHDPYKLSGEASDIDKLIKDTNNIQHKLSPHTDLSWKPDGKVVAIGNEDGCIDIY 539          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: UPI001180FC47 (gem-associated protein 5 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=UPI001180FC47)

HSP 1 Score: 149 bits (375), Expect = 2.490e-37
Identity = 85/247 (34.41%), Postives = 133/247 (53.85%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGL-GKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTPA---------GEARHLLYSCAADGKIMVSDEQESDAASKNLHESVAPS--LAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
             G  S G  HSR +F  +  +   G+E  +S SMDR++  W  AS    W +P LGG  YA+ FSP+    LA+ VGD  + +W+  +           + +RL W+G+++K TALAWHPRREG LAF  +DG++G+ DVFS +   + +S HR  VY L W  P          G+A + LYSCA +G I+  D  +    + ++ + +  +  +   L+  +D SW  DG+ +A+    G + ++
Sbjct:  307 FGTSSEGQNHSRIVFNTSLVQLQDGRELLISTSMDREVKCWDLASLDCCWTLPTLGGFVYALTFSPVGVGCLALGVGDNMIRVWNTLTTQNQ-------YDTRLFWQGIKSKVTALAWHPRREGSLAFGTDDGKVGIYDVFSNKPPQISSSYHRKTVYTLAWGPPVPPMSFGAAEGKAAYSLYSCAGEGIILQHDPYKLSGEASDIDKLIKDTNNIQHKLSPHTDLSWKPDGKVVAIGNEDGCIDIY 546          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: A0A1A8RUV8_9TELE (Gem (Nuclear organelle) associated protein 5 n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8RUV8_9TELE)

HSP 1 Score: 148 bits (373), Expect = 4.590e-37
Identity = 84/246 (34.15%), Postives = 133/246 (54.07%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGL-GKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTPA--------GEARHLLYSCAADGKIMVSDEQESDAASKNLHESVAP--SLAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
             G  S G  H+R +F ++  +   GKE  +S SMDR +  W   S    W +P LGGH YA+ FSP+  + LA+ VGD  + +W+  S+          +  R  W+G+++K TALAWHPR+EG L+F  +DG++G+ DVFS +   + +S HR  VY L W            G+A + LYSC+ +G I+  D  +   A+ ++ + +    S+   L+  +D SW  DG+ +A+    G + V+
Sbjct:  307 FGSSSEGQNHNRIVFNMSSVQLQDGKELLISTSMDRDIKCWDLESLGCCWTLPTLGGHVYALTFSPVGVACLALGVGDNMIRVWNTLSSQNQ-------YDIRSFWQGIKSKVTALAWHPRKEGWLSFGTDDGKVGIYDVFSNKPPQISSSYHRKTVYTLAWGPAVLPMSLGAEGKASYSLYSCSGEGVILQHDPSKLSRAAADIDKLIRDTNSIQHKLSPHTDLSWKPDGKAVAIGNEDGSIDVY 545          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: A0A3Q3ESF6_KRYMA (Gem nuclear organelle associated protein 5 n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3ESF6_KRYMA)

HSP 1 Score: 147 bits (372), Expect = 6.250e-37
Identity = 87/250 (34.80%), Postives = 132/250 (52.80%), Query Frame = 1
Query:    1 QQRRRLGPGSGGVQHSRPIFCVAPAEGLGKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTPA--------GEARHLLYSCAADGKIM--VSDEQESDAASKNLHESVAPSLAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
            +Q+  L   S G  H+R +F ++  E   +E  +S SMDR++  W   S    W +P LGGH Y + FSP+    LA+ VGD  + +W+  SA          +  R  W+G+++K TALAWHPR+EGLL+F  +DG++G+ DVFS +   + +S HR  VY L W  P         G+    LYSCA +G I+  V  +   +A+  +       S+   L+  +D SW  DG+ +AV    G + V+
Sbjct:  301 KQKWSLFGASEGQNHNRIVFNMSSVELQDRELLISTSMDREIKCWDLNSLGCCWTLPTLGGHVYTLTFSPVGVGCLALGVGDNMIRVWNTLSAQNQ-------YDIRSFWQGIKSKVTALAWHPRKEGLLSFGTDDGKVGIYDVFSNKPPQISSSYHRKTVYTLAWGPPVPPVSFGAEGKQSFSLYSCAGEGVILQHVPSKLSGEASDIDTLIRDTNSIQHKLSPHTDLSWKPDGKVVAVGNEDGSIDVY 543          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: A0A1A8FYV6_9TELE (Gem (Nuclear organelle) associated protein 5 n=6 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A8FYV6_9TELE)

HSP 1 Score: 147 bits (370), Expect = 1.160e-36
Identity = 82/246 (33.33%), Postives = 133/246 (54.07%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGL-GKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTPA--------GEARHLLYSCAADGKIMVSDEQESDAASKNLHESV--APSLAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
             G  S G  H+R +F ++  +   G+E  +S SMDR +  W   S    W +P LGGH YA+ FSP+  + LA+ VGD  + +W+  S+          +  R  W+G+++K TALAWHPR+EG L+F  +DG++G+ DVFS +   + +S HR  VY L W            G+A + LYSC+ +G I+  D  +   A+ ++ + +    S+   ++  +D SW  DG+ +A+    G + V+
Sbjct:  307 FGSSSEGQNHNRIVFNMSSVQLRDGRELLISTSMDRDIKCWDLESLGCCWTLPTLGGHVYALTFSPVGVACLALGVGDNMIRVWNTLSSQNQ-------YDIRSFWQGIKSKVTALAWHPRKEGWLSFGTDDGKVGIYDVFSNKPPQISSSYHRKTVYTLAWGPAVLPMSLGAEGKASYSLYSCSGEGVILQHDPSKLSGAAADIDKLIRNTNSIQHKMSQHTDLSWKPDGKAVAIGNEDGSIDVY 545          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: A0A8C6T4P1_9GOBI (Gem (nuclear organelle) associated protein 5 n=4 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6T4P1_9GOBI)

HSP 1 Score: 146 bits (368), Expect = 2.120e-36
Identity = 81/243 (33.33%), Postives = 132/243 (54.32%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGLGKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRH-SLFASRHRGQVYELQWRTPA-----GEARHL-LYSCAADGKIMVSDEQESDAASKNLHESVAPS--LAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
             G  S    H+R IF  +     G+   +S SMDR++  W  +S    W +P LGG  Y ++FSPL    LA+ VGD  + +W+ +S+          + +R  W+G+++K TALAWHP+REG LAF  +DG++G+ DVFS +   + +S H+  +Y L W  P      GE   + LYSCA +G I+  D  + ++ + N+ + +  S  +   L+  +D +W  DG+ +A+    G + V+
Sbjct:  305 FGSSSDAQGHNRIIFNTSSFVTSGQSLLLSTSMDREVKCWDMSSLELCWTLPALGGFVYCLSFSPLGSGTLALGVGDNMIRVWNTQSSNH--------YDTRSFWQGIKSKVTALAWHPQREGALAFGTDDGKVGIYDVFSSKQPQISSSYHKKTIYTLAWGPPVPPLSFGEMHSICLYSCAGEGTILQHDPYQLNSEAFNIDKLIKNSNNIQHKLSPHTDLNWKPDGKVVAIGNEDGCIDVY 539          
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Match: A0A7N8YHC7_9TELE (Gem (nuclear organelle) associated protein 5 n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8YHC7_9TELE)

HSP 1 Score: 146 bits (368), Expect = 2.120e-36
Identity = 83/247 (33.60%), Postives = 132/247 (53.44%), Query Frame = 1
Query:   16 LGPGSGGVQHSRPIFCVAPAEGL-GKEFYVSASMDRQMCVWSHASGRAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRVPLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRHS-LFASRHRGQVYELQWRTPA---------GEARHLLYSCAADGKIMVSDEQESDAASKNLHESVAPS--LAGLLADCSDFSWTVDGRHLAVATGKGQVLVF 717
            LG  S G  HSR +F ++  +   G+E  +S SMDR++  W  AS    W +P LGG  YA+ FSP+    LA+ VGD  + +W+  S           + +R  W+G+++K TALAWHP +EG LAF  +DG++G+ +VFS +   + +S HR  VY L W  P          G+  + LYSCA +G I+  D  +    + ++ + +  +  +   L+  +D SW  DG+ +A+    G + V+
Sbjct:  307 LGTSSEGQNHSRIVFNMSVVKLQDGRELLISTSMDREIKCWDLASLDCCWTLPTLGGFVYALTFSPVGAGCLAIGVGDNMIRVWNTLSTQNQ-------YDTRFFWQGIKSKVTALAWHPAKEGSLAFGTDDGKVGIYEVFSNKPPHISSSYHRKTVYTLAWGPPVPPMSFGAVGGKLYYSLYSCAGEGTILQHDPSKLSGEASDIDKLIRDTNDIKHKLSPHTDLSWKPDGKVVAIGNEDGCIDVY 546          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93990.21691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C41B7101.340e-3734.84gem-associated protein 5 n=1 Tax=Solea senegalensi... [more]
A0A673C9L1_9TELE2.470e-3734.41Gem (nuclear organelle) associated protein 5 n=1 T... [more]
A0A673CCU8_9TELE2.480e-3734.41Gem (nuclear organelle) associated protein 5 n=1 T... [more]
A0A673CB35_9TELE2.480e-3734.41Gem (nuclear organelle) associated protein 5 n=1 T... [more]
UPI001180FC472.490e-3734.41gem-associated protein 5 n=1 Tax=Sphaeramia orbicu... [more]
A0A1A8RUV8_9TELE4.590e-3734.15Gem (Nuclear organelle) associated protein 5 n=1 T... [more]
A0A3Q3ESF6_KRYMA6.250e-3734.80Gem nuclear organelle associated protein 5 n=2 Tax... [more]
A0A1A8FYV6_9TELE1.160e-3633.33Gem (Nuclear organelle) associated protein 5 n=6 T... [more]
A0A8C6T4P1_9GOBI2.120e-3633.33Gem (nuclear organelle) associated protein 5 n=4 T... [more]
A0A7N8YHC7_9TELE2.120e-3633.60Gem (nuclear organelle) associated protein 5 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93990contigM-pyrifera_M_contig93990:30..746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score149.1
Seed ortholog evalue2.7e-33
Seed eggNOG ortholog69293.ENSGACP00000027532
Preferred nameGEMIN5
KEGG koko:K13133
KEGG Pathwayko03013,map03013
KEGG ModuleM00426
Hectar predicted targeting categoryother localisation
GOsGO:0000339,GO:0000340,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0006810,GO:0006913,GO:0008150,GO:0008152,GO:0008380,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0017069,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030619,GO:0030621,GO:0030622,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032268,GO:0032797,GO:0032991,GO:0034248,GO:0034622,GO:0034641,GO:0034718,GO:0034719,GO:0043021,GO:0043022,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0046483,GO:0046907,GO:0050789,GO:0050794,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051234,GO:0051246,GO:0051641,GO:0051649,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097504,GO:0120114,GO:1901360,GO:1901363,GO:2000112
EggNOG free text desc.Gem (nuclear organelle) associated protein 5
EggNOG OGs2CMCI@1,2QPYZ@2759,39RBZ@33154,3B9NX@33208,3CXYD@33213,483F3@7711,48XWH@7742,4A1X0@7898
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03041
Exons1
Model size717
Cds size717
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816852.9765995-CDS-M-pyrifera_M_contig93990:29..7461622816852.9765995-CDS-M-pyrifera_M_contig93990:29..746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93990 30..746 +
1692278216.8769526-CDS-M-pyrifera_M_contig93990:29..7461692278216.8769526-CDS-M-pyrifera_M_contig93990:29..746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93990 30..746 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93990.21691.1prot_M-pyrifera_M_contig93990.21691.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93990 30..746 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93990.21691.1

>prot_M-pyrifera_M_contig93990.21691.1 ID=prot_M-pyrifera_M_contig93990.21691.1|Name=mRNA_M-pyrifera_M_contig93990.21691.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=239bp
QQRRRLGPGSGGVQHSRPIFCVAPAEGLGKEFYVSASMDRQMCVWSHASG
RAAWAVPGLGGHAYAVAFSPLHGSLLAVAVGDASVLLWDCESAAGGAPRV
PLGFRSRLLWRGVQAKATALAWHPRREGLLAFACEDGRLGVVDVFSGRHS
LFASRHRGQVYELQWRTPAGEARHLLYSCAADGKIMVSDEQESDAASKNL
HESVAPSLAGLLADCSDFSWTVDGRHLAVATGKGQVLVF
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mRNA from alignment at M-pyrifera_M_contig93990:30..746+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93990.21691.1 ID=mRNA_M-pyrifera_M_contig93990.21691.1|Name=mRNA_M-pyrifera_M_contig93990.21691.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=717bp|location=Sequence derived from alignment at M-pyrifera_M_contig93990:30..746+ (Macrocystis pyrifera P11B4 male)
CAGCAAAGGAGACGCCTGGGGCCTGGCAGCGGAGGAGTCCAGCACTCGAG GCCCATCTTCTGTGTGGCTCCTGCAGAAGGTCTGGGCAAGGAGTTCTATG TCTCTGCCTCCATGGACCGCCAGATGTGTGTGTGGTCGCACGCCAGCGGC AGAGCTGCCTGGGCGGTGCCAGGCCTGGGTGGCCACGCCTATGCAGTGGC GTTCAGCCCTCTCCATGGCAGTCTCTTGGCTGTGGCCGTGGGCGACGCAA GTGTTCTGCTTTGGGACTGTGAGAGTGCTGCGGGGGGAGCCCCACGAGTG CCGCTGGGATTCCGCTCGCGGCTGCTGTGGAGGGGAGTACAGGCGAAGGC TACGGCACTGGCGTGGCATCCAAGGAGAGAGGGACTCTTGGCTTTCGCAT GTGAGGATGGGAGACTGGGAGTTGTGGATGTGTTCTCTGGCAGGCACAGC CTCTTTGCCTCGCGCCACCGCGGCCAAGTCTACGAACTGCAGTGGAGAAC TCCTGCAGGCGAAGCGAGACATCTCCTCTACAGCTGTGCTGCTGACGGCA AGATAATGGTCTCAGACGAGCAGGAGAGCGACGCTGCATCGAAGAACCTC CACGAGAGTGTTGCTCCCTCCCTCGCTGGCCTCTTGGCCGACTGTTCTGA TTTCTCGTGGACAGTTGATGGCAGACACTTGGCAGTGGCCACTGGCAAGG GCCAAGTGCTTGTTTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93990:30..746+

>mRNA_M-pyrifera_M_contig93990.21691.1 ID=mRNA_M-pyrifera_M_contig93990.21691.1|Name=mRNA_M-pyrifera_M_contig93990.21691.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1434bp|location=Sequence derived from alignment at M-pyrifera_M_contig93990:30..746+ (Macrocystis pyrifera P11B4 male)
CAGCAAAGGAGACGCCTGGGGCCTGGCAGCGGAGGAGTCCAGCACTCGAG
GCCCATCTTCTGTGTGGCTCCTGCAGAAGGTCTGGGCAAGGAGTTCTATG
TCTCTGCCTCCATGGACCGCCAGATGTGTGTGTGGTCGCACGCCAGCGGC
AGAGCTGCCTGGGCGGTGCCAGGCCTGGGTGGCCACGCCTATGCAGTGGC
GTTCAGCCCTCTCCATGGCAGTCTCTTGGCTGTGGCCGTGGGCGACGCAA
GTGTTCTGCTTTGGGACTGTGAGAGTGCTGCGGGGGGAGCCCCACGAGTG
CCGCTGGGATTCCGCTCGCGGCTGCTGTGGAGGGGAGTACAGGCGAAGGC
TACGGCACTGGCGTGGCATCCAAGGAGAGAGGGACTCTTGGCTTTCGCAT
GTGAGGATGGGAGACTGGGAGTTGTGGATGTGTTCTCTGGCAGGCACAGC
CTCTTTGCCTCGCGCCACCGCGGCCAAGTCTACGAACTGCAGTGGAGAAC
TCCTGCAGGCGAAGCGAGACATCTCCTCTACAGCTGTGCTGCTGACGGCA
AGATAATGGTCTCAGACGAGCAGGAGAGCGACGCTGCATCGAAGAACCTC
CACGAGAGTGTTGCTCCCTCCCTCGCTGGCCTCTTGGCCGACTGTTCTGA
TTTCTCGTGGACAGTTGATGGCAGACACTTGGCAGTGGCCACTGGCAAGG
GCCAAGTGCTTGTTTTTCAGCAAAGGAGACGCCTGGGGCCTGGCAGCGGA
GGAGTCCAGCACTCGAGGCCCATCTTCTGTGTGGCTCCTGCAGAAGGTCT
GGGCAAGGAGTTCTATGTCTCTGCCTCCATGGACCGCCAGATGTGTGTGT
GGTCGCACGCCAGCGGCAGAGCTGCCTGGGCGGTGCCAGGCCTGGGTGGC
CACGCCTATGCAGTGGCGTTCAGCCCTCTCCATGGCAGTCTCTTGGCTGT
GGCCGTGGGCGACGCAAGTGTTCTGCTTTGGGACTGTGAGAGTGCTGCGG
GGGGAGCCCCACGAGTGCCGCTGGGATTCCGCTCGCGGCTGCTGTGGAGG
GGAGTACAGGCGAAGGCTACGGCACTGGCGTGGCATCCAAGGAGAGAGGG
ACTCTTGGCTTTCGCATGTGAGGATGGGAGACTGGGAGTTGTGGATGTGT
TCTCTGGCAGGCACAGCCTCTTTGCCTCGCGCCACCGCGGCCAAGTCTAC
GAACTGCAGTGGAGAACTCCTGCAGGCGAAGCGAGACATCTCCTCTACAG
CTGTGCTGCTGACGGCAAGATAATGGTCTCAGACGAGCAGGAGAGCGACG
CTGCATCGAAGAACCTCCACGAGAGTGTTGCTCCCTCCCTCGCTGGCCTC
TTGGCCGACTGTTCTGATTTCTCGTGGACAGTTGATGGCAGACACTTGGC
AGTGGCCACTGGCAAGGGCCAAGTGCTTGTTTTT
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