mRNA_M-pyrifera_M_contig93920.21681.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93920.21681.1
Unique NamemRNA_M-pyrifera_M_contig93920.21681.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: A0A5A8END0_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8END0_CAFRO)

HSP 1 Score: 260 bits (664), Expect = 6.450e-84
Identity = 133/220 (60.45%), Postives = 170/220 (77.27%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKKNAK 678
            DV   + V+S L  +ES+LG +P V+V+NAAGNFI+P+ERLS NAFS +  IV  GTANVTL   +RL   +RS VF AI+TTYA +GSG+V+PSA AKS V AL +SLA+EWG ++G RF+  APGPI T GAFSRLDP+GQF+K M++R+PS RLG P+ELANLAT+LCSPYASW++G+I+  DGGE   L GE NAL +V ++EWDML  +I+K  K
Sbjct:   67 DVASVEGVQSMLDSVESELG-LPNVIVNNAAGNFIAPSERLSANAFSRIVSIVLNGTANVTLETARRLNAAERSAVFLAITTTYASTGSGYVLPSACAKSGVEALIKSLAAEWGPKYGHRFLGIAPGPIETEGAFSRLDPTGQFKKMMIQRSPSQRLGVPDELANLATFLCSPYASWMSGEIVNFDGGETVALGGEFNALQQVSDKEWDMLESIIRKGNK 285          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: UPI001C4B2733 (2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4B2733)

HSP 1 Score: 251 bits (640), Expect = 1.140e-79
Identity = 129/217 (59.45%), Postives = 167/217 (76.96%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKK 669
            DVRD  +V + ++Q+  D+   P+V+++NAAGNFISP+ERLS NA+  + DIV  GTA VTL  GK+LI+ K+   F AI+T YA+SGSGFV PSASAK+ V AL +SL +EWG R+G+RF    PGP+ T GAFSRLDP+G+FEK M++R P GRLG  EE+ANLATYLCS YASW+NG ++ IDGGE   +AGEMN LH+V +EEW+M+ EMI+K
Sbjct:  116 DVRDPTSVSNAVAQLI-DVAGHPSVIINNAAGNFISPSERLSANAWRTITDIVLNGTAYVTLEIGKQLIKAKKGAAFLAITTVYAESGSGFVTPSASAKAGVEALCKSLTAEWG-RYGMRFNVIQPGPVKTKGAFSRLDPTGEFEKIMIQRIPCGRLGTVEEIANLATYLCSDYASWVNGAVVRIDGGEFVFMAGEMNNLHKVTQEEWNMMEEMIRK 330          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: E4WYI3_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WYI3_OIKDI)

HSP 1 Score: 249 bits (637), Expect = 1.280e-79
Identity = 133/218 (61.01%), Postives = 164/218 (75.23%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKKN 672
            DVRDA AV+  +  +  D  SVP +V++NAAGNFISPTERLSTNAFS+V DIV KG+ NVTL  GKR I  ++  VF AI+T Y  +GS FVVPSA AKS V  L++SLA EWG R+G+RF   APGPI T GAFSRLDP+G+F    ++  P+GRLG PEE+ANLAT++ S YASW+NG+ IT DGGE N LAGE NAL +VK+E+WD + +MIK N
Sbjct:   80 DVRDAAAVKEAVQSVV-DQASVPDIVINNAAGNFISPTERLSTNAFSSVIDIVLKGSINVTLETGKRAIAAQKPCVFLAITTHYTKAGSAFVVPSACAKSGVETLHQSLAVEWG-RYGMRFNCIAPGPIYTEGAFSRLDPTGEFMNHAIKNLPTGRLGEPEEIANLATFMVSDYASWLNGETITFDGGEFNALAGEFNALRKVKDEQWDFMEQMIKGN 295          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: A0A7J7VMM1_PIPKU (2,4-dienoyl-CoA reductase 1 n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7VMM1_PIPKU)

HSP 1 Score: 247 bits (631), Expect = 2.310e-79
Identity = 134/217 (61.75%), Postives = 164/217 (75.58%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKK 669
            DVRD D V S +S++ S  G +P VV++NAAGNFISPTERLS NA+  + DIV  GTA VTL  GK+LI+ +R   F AI+T YA+SGSGFVVPSASAK+ V AL +SLA+EWG R+G+RF    PGPI T GAFSRLDP+G FEK MV+R P GRLG  EELANLA +LCS YASWING +I  DGGE   ++GE N+L +V +E+WD + EMI+K
Sbjct:   39 DVRDPDMVRSAVSELISVAG-LPDVVINNAAGNFISPTERLSPNAWRTITDIVLNGTAFVTLEVGKQLIKAQRGAAFLAITTIYAESGSGFVVPSASAKAGVEALNKSLAAEWG-RYGMRFNVIQPGPIKTKGAFSRLDPTGVFEKEMVDRIPCGRLGTVEELANLAAFLCSDYASWINGAVIRFDGGEEVFISGEFNSLKKVTKEQWDTMEEMIRK 253          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: G1PF48_MYOLU (2,4-dienoyl-CoA reductase 1 n=12 Tax=Laurasiatheria TaxID=314145 RepID=G1PF48_MYOLU)

HSP 1 Score: 246 bits (628), Expect = 3.770e-78
Identity = 133/217 (61.29%), Postives = 163/217 (75.12%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKK 669
            DVRD D V S +S++ S  G +P VV++NAAGNFISPTERLS NA+  + DIV  GTA VTL  GK+LI+ +R   F AI+T YA+SGSGFVVPSASAK+ V AL +SLA+EWG R+G+RF    PGPI T GAFSRLDP+G FEK MV R P GRLG  EELANLA +LCS YASWING +I  DGGE   ++GE N+L +V +E+WD + E+I+K
Sbjct:   94 DVRDPDMVRSAVSELISVAG-LPDVVINNAAGNFISPTERLSPNAWRTITDIVLNGTAFVTLEVGKQLIKAQRGAAFLAITTIYAESGSGFVVPSASAKAGVEALNKSLAAEWG-RYGMRFNVIQPGPIKTKGAFSRLDPTGAFEKEMVNRIPCGRLGTVEELANLAAFLCSDYASWINGAVIRFDGGEEVFISGEFNSLQKVTKEQWDTMEELIRK 308          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: A0A6J2W281_CHACN (2,4-dienoyl-CoA reductase, mitochondrial n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W281_CHACN)

HSP 1 Score: 247 bits (630), Expect = 3.920e-78
Identity = 131/216 (60.65%), Postives = 167/216 (77.31%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIK 666
            DVRD  +VE+ +SQ+ +D+G +P VV++NAAGNFISP+E+LS NA+  + DIV  GTA VTL  GKRLI+ ++   F AI+T YA+SGSGFVVPSASAK+ V AL +SLA+EWG R+G+RF    PGPI T GAFSRLDP+G FEK+M+ R P+GRLG PEE+ANLA YLCS YASW++G +I +DGGE   +AGE N L RV +E+W ML  MI+
Sbjct:  118 DVRDPASVEAAVSQLINDIG-LPDVVINNAAGNFISPSEKLSANAWRTITDIVLNGTAYVTLEIGKRLIKAEKGAAFLAITTIYAESGSGFVVPSASAKAGVEALCKSLAAEWG-RYGMRFNIIQPGPIRTKGAFSRLDPTGMFEKSMIGRIPTGRLGTPEEIANLAAYLCSDYASWVSGAVIRMDGGEYVSMAGEFNELKRVTKEQWAMLEAMIR 331          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: UPI00074FFE3F (2,4-dienoyl-CoA reductase, mitochondrial n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FFE3F)

HSP 1 Score: 247 bits (630), Expect = 4.040e-78
Identity = 129/217 (59.45%), Postives = 166/217 (76.50%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKK 669
            DVRD ++V + +SQ+  + G  P+V+++NAAGNFISP+ERLS NA+  + DIV  GTA VTL  GK LI+ ++   F AI+T YA+SGSGFV PSASAK+ V AL +SLA+EWG R+GLRF    PGPI T GAFSRLDP+G FEK M++R P GRLG  EE+ANLATYLCS YASW+NG +I +DGGE   +AGE N LH+V +E+W+++ EMI+K
Sbjct:  119 DVRDPNSVSNAVSQLIKEAGH-PSVIINNAAGNFISPSERLSANAWKTITDIVLNGTAYVTLEIGKELIKAQKGAAFLAITTIYAESGSGFVSPSASAKAGVEALCKSLAAEWG-RYGLRFNIIQPGPIKTKGAFSRLDPTGSFEKGMIQRIPCGRLGTVEEIANLATYLCSDYASWVNGAVIRMDGGEYVFMAGEFNDLHKVTKEQWNVMEEMIRK 333          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: G1KK64_ANOCA (2,4-dienoyl-CoA reductase 1 n=2 Tax=Anolis carolinensis TaxID=28377 RepID=G1KK64_ANOCA)

HSP 1 Score: 246 bits (629), Expect = 5.220e-78
Identity = 131/217 (60.37%), Postives = 164/217 (75.58%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKK 669
            DVRD  +V   +SQ+  D+   P+V+++NAAGNFISP+ERLS NAF  + DIV  GTA VTL  GK+LI+ K+   F AI+T YA++GSGFV+PSASAK+ V AL +SLA+EWG R+GLRF    PGPI T GAFSRLDP+G+FEK M++R P GRLG  EE+ANLATYLCS YASWI G +I  DGGE   +AGE N+L +V  EEW+M+ EMI+K
Sbjct:  116 DVRDPASVSDAVSQLI-DVAGHPSVIINNAAGNFISPSERLSANAFRTITDIVLNGTAFVTLEIGKQLIKAKKGAAFLAITTIYAETGSGFVMPSASAKAGVEALCKSLAAEWG-RYGLRFNVIQPGPIKTKGAFSRLDPAGKFEKEMIQRIPCGRLGTVEEIANLATYLCSDYASWITGAVIRFDGGEYVQMAGEFNSLRKVTNEEWNMMEEMIRK 330          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: A0A6P8Q2T9_GEOSA (2,4-dienoyl-CoA reductase, mitochondrial isoform X1 n=3 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8Q2T9_GEOSA)

HSP 1 Score: 246 bits (629), Expect = 7.970e-78
Identity = 131/217 (60.37%), Postives = 163/217 (75.12%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKK 669
            DVRD  +V+  ++++    G  P VV++NAAGNFISP+ERLS NA+  + DIV  GTANVTL  G+ LI  K+ GVF AI+T YADSGSGFVVPSASAK+ V A+ +SLA+EWG R+GLRF    PGPI T GAFSRLDP+G+FE+ M++R P GRLG  EE+ NLA YLCS YA+W++G +I IDGGE   +AGE N L RV  E+WDM+A MIKK
Sbjct:  130 DVRDPVSVKKAVAEVIQVSGH-PNVVINNAAGNFISPSERLSANAWRTITDIVLNGTANVTLEIGRELINAKKGGVFLAITTIYADSGSGFVVPSASAKAGVEAMCKSLAAEWG-RYGLRFNVMQPGPIKTKGAFSRLDPTGEFEEKMIDRIPCGRLGTVEEIGNLAAYLCSDYANWVSGAVIKIDGGEYASMAGEFNELKRVTNEQWDMIAAMIKK 344          
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Match: A0A6P3R707_PTEVA (2,4-dienoyl-CoA reductase, mitochondrial n=5 Tax=Pteropodinae TaxID=77225 RepID=A0A6P3R707_PTEVA)

HSP 1 Score: 244 bits (624), Expect = 2.480e-77
Identity = 130/217 (59.91%), Postives = 165/217 (76.04%), Query Frame = 1
Query:   19 DVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTNAFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVPSASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQFEKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLAGEMNALHRVKEEEWDMLAEMIKK 669
            DVRD D V++T+S++ S  G  P +V++NAAGNFISPTERLS NA+  + DIV  GTA V LA GK+LIE +R   F AI+T YA++GSGFVVPSASAK+ V AL +SLA+EW K +G+RF    PGPI T GAFSRLDP+G FEK M+ER P GRLG  EELANLA +LCS YASWING +I  DGGE+++++GE N L +V +E+WD +  +I+K
Sbjct:  110 DVRDPDMVQNTVSKLISVAGH-PDIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVMLAVGKQLIEAQRGAAFLAITTVYAETGSGFVVPSASAKAGVEALSKSLAAEWAK-YGMRFNVIQPGPIKTKGAFSRLDPTGTFEKDMIERIPCGRLGTVEELANLAAFLCSDYASWINGAVIRFDGGEQSLISGEFNNLRKVTKEQWDTIEGLIRK 324          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93920.21681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8END0_CAFRO6.450e-8460.45Uncharacterized protein n=3 Tax=Sar TaxID=2698737 ... [more]
UPI001C4B27331.140e-7959.452,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producin... [more]
E4WYI3_OIKDI1.280e-7961.01Uncharacterized protein n=1 Tax=Oikopleura dioica ... [more]
A0A7J7VMM1_PIPKU2.310e-7961.752,4-dienoyl-CoA reductase 1 n=1 Tax=Pipistrellus k... [more]
G1PF48_MYOLU3.770e-7861.292,4-dienoyl-CoA reductase 1 n=12 Tax=Laurasiatheri... [more]
A0A6J2W281_CHACN3.920e-7860.652,4-dienoyl-CoA reductase, mitochondrial n=1 Tax=C... [more]
UPI00074FFE3F4.040e-7859.452,4-dienoyl-CoA reductase, mitochondrial n=1 Tax=G... [more]
G1KK64_ANOCA5.220e-7860.372,4-dienoyl-CoA reductase 1 n=2 Tax=Anolis carolin... [more]
A0A6P8Q2T9_GEOSA7.970e-7860.372,4-dienoyl-CoA reductase, mitochondrial isoform X... [more]
A0A6P3R707_PTEVA2.480e-7759.912,4-dienoyl-CoA reductase, mitochondrial n=5 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93920contigM-pyrifera_M_contig93920:16..696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score255.0
Seed ortholog evalue3.3e-65
Seed eggNOG ortholog28377.ENSACAP00000010305
Preferred nameDECR1
KEGG koko:K13236
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0002376,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0008670,GO:0009056,GO:0009062,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0016042,GO:0016043,GO:0016054,GO:0016491,GO:0016627,GO:0016628,GO:0016651,GO:0019395,GO:0019752,GO:0022607,GO:0030258,GO:0031974,GO:0031981,GO:0032787,GO:0034440,GO:0036094,GO:0042742,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0046395,GO:0048037,GO:0050661,GO:0050662,GO:0050829,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051704,GO:0051707,GO:0055114,GO:0065003,GO:0070013,GO:0070402,GO:0071704,GO:0071840,GO:0072329,GO:0097159,GO:0098542,GO:1901265,GO:1901363,GO:1901575
EggNOG free text desc.2,4-dienoyl CoA reductase 1, mitochondrial
EggNOG OGs3905U@33154,3BBKU@33208,3CZ60@33213,48BVY@7711,48ZUF@7742,COG1028@1,KOG0725@2759
EC1.3.1.34
COG Functional cat.Q
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size681
Cds size681
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816852.5429301-CDS-M-pyrifera_M_contig93920:15..6961622816852.5429301-CDS-M-pyrifera_M_contig93920:15..696Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93920 16..696 -
1692278216.6321013-CDS-M-pyrifera_M_contig93920:15..6961692278216.6321013-CDS-M-pyrifera_M_contig93920:15..696Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93920 16..696 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93920.21681.1prot_M-pyrifera_M_contig93920.21681.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93920 16..696 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93920.21681.1

>prot_M-pyrifera_M_contig93920.21681.1 ID=prot_M-pyrifera_M_contig93920.21681.1|Name=mRNA_M-pyrifera_M_contig93920.21681.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp
MAGYSLDVRDADAVESTLSQIESDLGSVPTVVVSNAAGNFISPTERLSTN
AFSAVFDIVAKGTANVTLAAGKRLIEEKRSGVFFAISTTYADSGSGFVVP
SASAKSAVNALYRSLASEWGKRHGLRFVAAAPGPIPTPGAFSRLDPSGQF
EKAMVERNPSGRLGHPEELANLATYLCSPYASWINGDIITIDGGERNMLA
GEMNALHRVKEEEWDMLAEMIKKNAK*
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mRNA from alignment at M-pyrifera_M_contig93920:16..696-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93920.21681.1 ID=mRNA_M-pyrifera_M_contig93920.21681.1|Name=mRNA_M-pyrifera_M_contig93920.21681.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=681bp|location=Sequence derived from alignment at M-pyrifera_M_contig93920:16..696- (Macrocystis pyrifera P11B4 male)
ATGGCCGGATATTCACTTGATGTCCGTGATGCTGATGCAGTGGAATCTAC ATTGTCTCAAATTGAAAGTGATTTAGGCTCTGTTCCAACTGTAGTGGTGA GCAACGCAGCTGGCAACTTCATTTCCCCAACAGAGCGTTTGTCGACCAAT GCATTCAGTGCAGTGTTTGATATTGTGGCTAAAGGGACAGCCAATGTCAC TTTGGCAGCTGGAAAACGTCTCATTGAAGAAAAACGGTCAGGTGTTTTCT TTGCCATCAGCACTACTTACGCTGATTCAGGCTCTGGCTTTGTCGTTCCG TCTGCATCTGCAAAGAGTGCTGTCAATGCCTTGTACCGTTCTCTTGCATC AGAATGGGGTAAACGTCATGGACTTCGCTTTGTCGCAGCAGCACCAGGAC CCATCCCAACCCCTGGTGCTTTTTCTCGTCTTGACCCAAGTGGACAATTC GAAAAAGCAATGGTAGAACGTAACCCATCTGGACGTCTTGGTCATCCAGA GGAGCTTGCAAACTTGGCAACATACCTCTGCTCTCCCTATGCATCCTGGA TTAATGGAGACATTATCACTATCGATGGTGGTGAGAGAAACATGCTTGCC GGCGAAATGAATGCTCTGCATCGAGTCAAGGAAGAAGAGTGGGACATGCT CGCAGAAATGATCAAGAAGAATGCAAAGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93920:16..696-

>mRNA_M-pyrifera_M_contig93920.21681.1 ID=mRNA_M-pyrifera_M_contig93920.21681.1|Name=mRNA_M-pyrifera_M_contig93920.21681.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1362bp|location=Sequence derived from alignment at M-pyrifera_M_contig93920:16..696- (Macrocystis pyrifera P11B4 male)
ATGGCCGGATATTCACTTGATGTCCGTGATGCTGATGCAGTGGAATCTAC
ATTGTCTCAAATTGAAAGTGATTTAGGCTCTGTTCCAACTGTAGTGGTGA
GCAACGCAGCTGGCAACTTCATTTCCCCAACAGAGCGTTTGTCGACCAAT
GCATTCAGTGCAGTGTTTGATATTGTGGCTAAAGGGACAGCCAATGTCAC
TTTGGCAGCTGGAAAACGTCTCATTGAAGAAAAACGGTCAGGTGTTTTCT
TTGCCATCAGCACTACTTACGCTGATTCAGGCTCTGGCTTTGTCGTTCCG
TCTGCATCTGCAAAGAGTGCTGTCAATGCCTTGTACCGTTCTCTTGCATC
AGAATGGGGTAAACGTCATGGACTTCGCTTTGTCGCAGCAGCACCAGGAC
CCATCCCAACCCCTGGTGCTTTTTCTCGTCTTGACCCAAGTGGACAATTC
GAAAAAGCAATGGTAGAACGTAACCCATCTGGACGTCTTGGTCATCCAGA
GGAGCTTGCAAACTTGGCAACATACCTCTGCTCTCCCTATGCATCCTGGA
TTAATGGAGACATTATCACTATCGATGGTGGTGAGAGAAACATGCTTGCC
GGCGAAATGAATGCTCTGCATCGAGTCAAGGAAGAAGAGTGGGACATGCT
CGCAGAAATGATCAAGAAGAATGCAAAGTAGATGGCCGGATATTCACTTG
ATGTCCGTGATGCTGATGCAGTGGAATCTACATTGTCTCAAATTGAAAGT
GATTTAGGCTCTGTTCCAACTGTAGTGGTGAGCAACGCAGCTGGCAACTT
CATTTCCCCAACAGAGCGTTTGTCGACCAATGCATTCAGTGCAGTGTTTG
ATATTGTGGCTAAAGGGACAGCCAATGTCACTTTGGCAGCTGGAAAACGT
CTCATTGAAGAAAAACGGTCAGGTGTTTTCTTTGCCATCAGCACTACTTA
CGCTGATTCAGGCTCTGGCTTTGTCGTTCCGTCTGCATCTGCAAAGAGTG
CTGTCAATGCCTTGTACCGTTCTCTTGCATCAGAATGGGGTAAACGTCAT
GGACTTCGCTTTGTCGCAGCAGCACCAGGACCCATCCCAACCCCTGGTGC
TTTTTCTCGTCTTGACCCAAGTGGACAATTCGAAAAAGCAATGGTAGAAC
GTAACCCATCTGGACGTCTTGGTCATCCAGAGGAGCTTGCAAACTTGGCA
ACATACCTCTGCTCTCCCTATGCATCCTGGATTAATGGAGACATTATCAC
TATCGATGGTGGTGAGAGAAACATGCTTGCCGGCGAAATGAATGCTCTGC
ATCGAGTCAAGGAAGAAGAGTGGGACATGCTCGCAGAAATGATCAAGAAG
AATGCAAAGTAG
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