mRNA_M-pyrifera_M_contig9381.21659.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9381.21659.1
Unique NamemRNA_M-pyrifera_M_contig9381.21659.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: D8LT83_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT83_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 1.880e-130
Identity = 196/244 (80.33%), Postives = 212/244 (86.89%), Query Frame = 1
Query:    1 QGPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVSGWLQEGQGEVHVLNALAAGTLAGAIESATCLTPLQNIQIKMTQDADAPRQARMGFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRRSRGDAPDEPLGPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVL 732
            +GPLHCA  TLR SG  GLYVGLPPWLTFALPRSAIRFTTFERVS WLQEGQG++  +NALAAGT+AGAIESATCLTPLQNIQIKM Q          GF++AL EI RREGLR GFFSGLWPTVVKGA+NNC+RFGL+NE   ALRRS GD+PDE L  GAVFG+GAAAGAVSAVVTHPIDTVKSNLQGLSA KYSGSLDCARKI+AS+GVSGLFRGL+PRI RVCLEIGLQFSLYD+ICR L
Sbjct:   63 KGPLHCATQTLRHSGILGLYVGLPPWLTFALPRSAIRFTTFERVSEWLQEGQGKLDAVNALAAGTVAGAIESATCLTPLQNIQIKMMQ-------MDRGFVYALGEILRREGLRNGFFSGLWPTVVKGAVNNCIRFGLYNETAAALRRSCGDSPDEALAAGAVFGIGAAAGAVSAVVTHPIDTVKSNLQGLSAGKYSGSLDCARKIIASSGVSGLFRGLSPRICRVCLEIGLQFSLYDSICRCL 299          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: W7T809_9STRA (Tricarboxylate transport mitochondrial-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T809_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.410e-62
Identity = 124/284 (43.66%), Postives = 165/284 (58.10%), Query Frame = 1
Query:    4 GPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVS-------------GWLQEGQGEVHVLNALAAGTLAGAIESATCLTPLQNIQIKMTQDADAPRQARMGFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRRSRGDAPDEPL------------------------GPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLDKKL 744
            GPL C   TLR  GP GLY GL PWL FA PRSA+RF+T+E VS             G LQ G+ + ++  ++AAG++AGA+E  T  TP+Q IQ+KM  DA +      GF+ A+  I R EGL KG ++GL PTV+KGA+NNC+RF  F+E     ++ + +  D  L                         P     LGA +G +SA+ THPIDTVKSN+Q LSA KY+ S +C   IL + G+ GL++G+ PR  RV LEIGL FSLY+ I   +D+ L
Sbjct:   34 GPLDCVRFTLRTKGPLGLYKGLTPWLVFAFPRSAVRFSTYEFVSQRFRETVSKESQEGELQNGKLDPYL--SMAAGSIAGAVEFLTVGTPMQCIQVKMAHDAYSKVPRFHGFVSAIVGIVRAEGLLKGLYAGLGPTVLKGAVNNCIRFSTFSELKYIYQKYKLNVADNRLTATFENFSTCPESDHFQAVHEAILNPLETMLLGATSGGLSAIATHPIDTVKSNMQSLSADKYTSSWNCFLSILRNQGLPGLYQGMAPRFVRVSLEIGLHFSLYEQIACRIDESL 315          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: A0A7S1TUF2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUF2_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.050e-57
Identity = 111/249 (44.58%), Postives = 155/249 (62.25%), Query Frame = 1
Query:    4 GPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFER-VSGWLQEGQGEVHVLNALAA-GTLAGAIESATCLTPLQNIQIKMTQDADAPRQARM--GFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRRSRGDAPDEPLGPGAVFGL-GAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLD 735
            G +  A  T+R+ GP GLY GLPPWL FA PRSA+RF+ FE  ++G    G G        AA G L+GA+E+A+ +TP+QN+QIK+  DA  P   R    F  +L +IPR  G+ +G F+G+ PTVVKGA+N+ +RF ++     ++ R+ G   D      AV  L GA AG VSA VTHPIDTVK+ +  L    Y  SL+C   +    GV+ L+ G+TPR+ RVC+E+ LQF+L++ I R++D
Sbjct:   63 GMVDIARATVRRFGPQGLYRGLPPWLFFAFPRSAVRFSVFEHSLAGATALGLGSAADPRLTAACGFLSGAVEAASVMTPMQNVQIKLMHDAHRPAAERRYPRFFASLWQIPRDLGVVEGLFAGMVPTVVKGAVNSMIRFSIYERAKESVARALGADGDST----AVHMLSGAMAGGVSAYVTHPIDTVKAQMMSLHGGSYGSSLECFLSVYRGGGVAALYCGITPRVIRVCMEVALQFALFEKISRIID 307          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: A0A0M0JMT8_9EUKA (Tricarboxylate transport mitochondrial-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JMT8_9EUKA)

HSP 1 Score: 181 bits (460), Expect = 2.930e-51
Identity = 114/262 (43.51%), Postives = 158/262 (60.31%), Query Frame = 1
Query:    1 QGPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVSGWLQE-------GQGEVHVLNALAAGTLAGAIESATCLTPLQNIQIKMTQDAD--APRQARMGFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRRSRGD-APD----EPLGPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLDKKL 744
            +GP   A  T+R+ G  GLY G   W+ FA PRSA+RF TF+ +SG  +        GQ  V      AAG +AG +E+A C TP Q I IKMT DA    P Q + G +HA+  + R +GL  GF++GL P V+KGA+ N +RF  F   GR  R  +G+ APD     PL        G  AGA+SAVV+ PIDTVK+N+ GL A ++  S  C  +++ + GVS LF G+ PR+ RV +E+GLQFSL++++ R++D+ L
Sbjct:   47 RGPFDVAARTVRERGVIGLYRGGASWVLFAGPRSAVRFGTFDALSGVSRSRDLPAKFGQSTVDT----AAGFIAGIVEAALCQTPNQVISIKMTHDASPRGPNQYQ-GMVHAIGCMYRADGLL-GFYAGLGPAVLKGAVTNSIRFLGF---GRLKRLIQGEPAPDGTPPPPLALWQAMLAGGTAGAISAVVSQPIDTVKANMMGLEAHRFRNSFSCLIELVRAGGVSCLFNGVAPRVVRVFIEVGLQFSLFESVSRMIDRHL 299          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: A0A7S0CXV1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CXV1_9EUKA)

HSP 1 Score: 179 bits (455), Expect = 9.820e-51
Identity = 102/241 (42.32%), Postives = 144/241 (59.75%), Query Frame = 1
Query:   28 TLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVS--GWLQEGQGEVHVLNALAAGTLAGAIESATCLTPLQNIQIKMTQDA-DAPRQARMGFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRRSRGDAPDEPLGPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGS-LDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLDK 738
            T+R+SGP GLY GL PWL F LPR A++F T+E ++    L++       L A+  G  AG +E A   TP+QN+ IKM  D+ D   +     +HA++ I R EG  +GF+SG+ PTV K ++NN +RF  + E  +    + G +  + L        G   G +SAVVT PIDTVK+N+Q LSA +Y  S L C R+I+  +G+ G +RGL PR+ RV LE  L F+LYD   R+LD+
Sbjct:   37 TMRRSGPLGLYEGLTPWLVFTLPRCALKFATYEWLTEKANLRQHSHSTQGLGAMLCGAGAGGVEWAVAGTPMQNVSIKMLHDSNDGNSRKYRSMIHAVASIWREEGFIRGFYSGILPTVAKASVNNGIRFAAYGEICKIFSSTNGLSGSKGLSTVESMVAGFLTGLISAVVTQPIDTVKTNMQSLSADRYDRSILGCCREIVRQSGLVGFYRGLGPRLCRVPLEQALLFTLYDRFGRILDR 277          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: A0A7S4A3I2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3I2_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.430e-50
Identity = 106/260 (40.77%), Postives = 141/260 (54.23%), Query Frame = 1
Query:    4 GPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFE-------RVSGWLQEGQGEVHVLNALAAGTLAGAIESATCLTPLQNIQIKMTQDADAP----RQARMGFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRF----GLFNEGGRALRRSRGDAPDEPLGPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLDK 738
            G +HC   T++ +G  GLY G  PW  FA PRSA+RF  FE       R SGW                G  AGA E+A C TP Q+IQIK+  DA       R + + F  A + I R  G+   F+ GL P V KGA+ NCVRF    G+    GR    S  ++          FG GA AGA+SAV++ P+DTVK+N+ GL    Y+ SLDCAR I+ + GV  L+ G  PR+ RV  E+GLQF+L+  + +++DK
Sbjct:   52 GAIHCFRQTIKTNGLRGLYSGCAPWFAFAGPRSAVRFAAFEFLSKDAPRTSGW------------DFLCGLGAGACEAALCQTPNQSIQIKLLHDASPAVVEKRYSHLPFFRACAAIGRHHGILS-FYDGLAPAVAKGALTNCVRFVGYKGILRASGREENASAMES----------FGAGAVAGAISAVISQPVDTVKANMMGLDRGVYASSLDCARAIVKADGVRALWNGGGPRVVRVFFEVGLQFALFGEVSKLVDK 288          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: F0YN24_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN24_AURAN)

HSP 1 Score: 170 bits (430), Expect = 8.720e-47
Identity = 103/250 (41.20%), Postives = 139/250 (55.60%), Query Frame = 1
Query:    1 QGPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVSGWLQEGQGEVHVLNALAAGTLAGAIESATCLTPLQNIQIKMTQDAD----APRQARMGFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRRSRGDAPDEPLG-PGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLD 735
            +G +HC   T+ + G  G+Y G   W  FA PRSA+RF  FER+S       G   +      G  AG  E+A C TP Q+IQIK+  DA     A R + + FL A  EI R+ G    F+ G+ P +VKGA+ N +RF     G R L R  G   D P   P      G  AGAVSAV + P+DTVK+N+ GL   +Y+ SL CAR I+ + G + LF GL PR+ RV  E+GLQF+L++   +++D
Sbjct:   60 RGVVHCLASTVERHGVRGVYAGCTSWFVFAGPRSAVRFAAFERLSREAPRTSGWDFL-----CGLGAGVCEAALCQTPNQSIQIKLQHDAAPAVAAKRYSHLPFLRACREIARQHG-PLAFYDGVVPAMVKGALTNSIRF----VGYRGLTRGLGLGGDGPAPTPAQSMLCGGVAGAVSAVASQPVDTVKANMMGLDRGRYASSLACARAIVEADGAAALFNGLRPRVVRVFFEVGLQFALFEQCTKIVD 299          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: R1D1S4_EMIHU (Mitochondrial citrate carrier n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D1S4_EMIHU)

HSP 1 Score: 163 bits (412), Expect = 1.350e-43
Identity = 105/257 (40.86%), Postives = 142/257 (55.25%), Query Frame = 1
Query:    1 QGPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVSGWLQEGQGEVHVLNALAAGTL----AGAIESATCLTPLQNIQIKMTQDADAPRQARM--GFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRRSRGDA-----PDEPLGPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLDK 738
            + P HCA  T+R+ G  GLY G   W  F  PRSA+RF TFE ++   Q  +G    L    A T+    AG  E+A C TP Q I IKM  D  +PR  R   G +H ++ I R EG+  G+F G+ P V KGA  N +RF  F   G+  R ++G A     P  PL        G  AGAVSAV T PIDTVK+N+ G+   +Y  +  C  +++ + G+  L  G+ PR+ RV +E+GLQFSLY+ + R LD+
Sbjct:   92 RSPFHCAAATVRERGVLGLYRGGLSWAIFGGPRSAVRFGTFETLTAASQR-RGMHQRLGTPTADTINGFAAGMAEAALCQTPNQVIAIKMIHD-QSPRGPRQYEGLVHCVACIWRAEGVA-GYFQGVGPAVTKGAATNAIRFLGF---GQLKRLAQGPAGADGTPPPPLATWQAMLCGGIAGAVSAVATQPIDTVKANMMGIDGGRYRSAFHCTAELVRAGGLRVLMNGVGPRVCRVFIEVGLQFSLYEYVGRALDR 342          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: A0A0L0GGZ5_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GGZ5_9EUKA)

HSP 1 Score: 160 bits (405), Expect = 4.080e-43
Identity = 88/246 (35.77%), Postives = 133/246 (54.07%), Query Frame = 1
Query:    1 QGPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVSGWLQEGQGEVHVLNALAAGTLAGAIESATCLTPLQNIQIKMTQDADAPRQARMGFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRAL-RRSRGDAPDEPLGPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLD 735
            +G + CA  T++  G SGLY G+ P L   +P+ A RFT +E+    L +  G++ V     AG +AGA E+   +TP++ +++K   D   P     G +H +S I + EGL  G + G+ PT+VK A N  +RF ++N     L  +   DA    +G       G  AG  S     PID VK+ +QGL + +Y  S DC ++I+   G S L++G TPR++RV L+  + F+LYD I   LD
Sbjct:   52 KGAIDCARQTIKNKGFSGLYKGITPLLVGTIPKVASRFTAYEQGKALLADENGKLTVGRTFCAGLMAGATEAVLAVTPMETVKVKFIADQSLPNPRYKGLIHGVSTIVKEEGL-SGIYKGVGPTIVKQASNQAIRFVVYNRVRETLCAKLELDASVPHVG--VTMAAGVVAGTASVYGNTPIDVVKTRMQGLESKQYKNSFDCFKQIVQKEGWSALYKGATPRLSRVALDTAIVFTLYDLISAQLD 294          
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Match: UPI000719A444 (tricarboxylate transport protein, mitochondrial-like isoform X3 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719A444)

HSP 1 Score: 160 bits (406), Expect = 4.830e-43
Identity = 90/246 (36.59%), Postives = 135/246 (54.88%), Query Frame = 1
Query:    4 GPLHCAMHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVSGWLQEGQGEVHVLNALAAGTLAGAIESATCLTPLQNIQIKMTQDADAPRQARMGFLHALSEIPRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRR-SRGDAPDEPLGPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKILASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLDK 738
            G   C   T+R  G  GLY GL P L  A+P+  +RF TFE++     +  G +  +N L  G  AG +E+   +TP++ I+ K   D  + +    GF H + EI R +G+R G + GL PT++K   N  +RF +       L+   RG  P++P+    V G GA AGAVS    +P+D VK+ LQGL A KY G+ DC  KI+   G    ++G+ PR++RVCL++ + F +YD    + +K
Sbjct:   76 GIFDCVAKTVRGHGVKGLYRGLSPLLVGAVPKVGVRFGTFEQLKLKAVDENGSLSGVNRLMCGLGAGVMEAIIAVTPMETIKTKFINDQQSAQPKFKGFFHGVREIIRTQGIR-GTYQGLIPTMMKQGSNQAMRFFVME----TLKDWYRGGDPNKPVNKAIVGGFGAMAGAVSVFGNNPLDVVKTRLQGLEAHKYKGTWDCLVKIMTKEGPLAFYKGVVPRLSRVCLDVAITFMVYDTFMELFNK 316          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9381.21659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT83_ECTSI1.880e-13080.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7T809_9STRA4.410e-6243.66Tricarboxylate transport mitochondrial-like protei... [more]
A0A7S1TUF2_9STRA3.050e-5744.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0M0JMT8_9EUKA2.930e-5143.51Tricarboxylate transport mitochondrial-like protei... [more]
A0A7S0CXV1_9EUKA9.820e-5142.32Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S4A3I2_9STRA3.430e-5040.77Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YN24_AURAN8.720e-4741.20Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
R1D1S4_EMIHU1.350e-4340.86Mitochondrial citrate carrier n=2 Tax=Emiliania hu... [more]
A0A0L0GGZ5_9EUKA4.080e-4335.77Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
UPI000719A4444.830e-4336.59tricarboxylate transport protein, mitochondrial-li... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9381contigM-pyrifera_M_contig9381:138..2559 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.2
Seed ortholog evalue9e-101
Seed eggNOG ortholog2880.D8LT83
Preferred nameSLC25A1
KEGG koko:K04646,ko:K15100
KEGG TC2.A.29.7
KEGG Pathwayko04142,ko04144,ko04721,ko04961,ko05016,ko05100,map04142,map04144,map04721,map04961,map05016,map05100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006842,GO:0006843,GO:0006855,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015137,GO:0015142,GO:0015238,GO:0015318,GO:0015711,GO:0015746,GO:0015849,GO:0015893,GO:0016006,GO:0016020,GO:0016021,GO:0016051,GO:0018130,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034220,GO:0034641,GO:0034654,GO:0035337,GO:0035383,GO:0035384,GO:0035674,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046364,GO:0046390,GO:0046483,GO:0046942,GO:0046943,GO:0046949,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055085,GO:0055086,GO:0071616,GO:0071702,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098656,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1903825,GO:1905039,GO:1990542,GO:1990546
EggNOG free text desc.mitochondrial tricarboxylic acid transmembrane transport
EggNOG OGsKOG0756@1,KOG0756@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04131,ko04147
Exons5
Model size1058
Cds size729
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816851.3111382-UTR-M-pyrifera_M_contig9381:137..1581622816851.3111382-UTR-M-pyrifera_M_contig9381:137..158Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9381 138..158 +
1692278215.9224901-UTR-M-pyrifera_M_contig9381:137..1581692278215.9224901-UTR-M-pyrifera_M_contig9381:137..158Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9381 138..158 +
1622816851.3834465-UTR-M-pyrifera_M_contig9381:2251..25591622816851.3834465-UTR-M-pyrifera_M_contig9381:2251..2559Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9381 2252..2559 +
1692278215.9908311-UTR-M-pyrifera_M_contig9381:2251..25591692278215.9908311-UTR-M-pyrifera_M_contig9381:2251..2559Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9381 2252..2559 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816851.3256633-CDS-M-pyrifera_M_contig9381:158..2351622816851.3256633-CDS-M-pyrifera_M_contig9381:158..235Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 159..235 +
1692278215.9353852-CDS-M-pyrifera_M_contig9381:158..2351692278215.9353852-CDS-M-pyrifera_M_contig9381:158..235Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 159..235 +
1622816851.336725-CDS-M-pyrifera_M_contig9381:536..7311622816851.336725-CDS-M-pyrifera_M_contig9381:536..731Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 537..731 +
1692278215.9447727-CDS-M-pyrifera_M_contig9381:536..7311692278215.9447727-CDS-M-pyrifera_M_contig9381:536..731Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 537..731 +
1622816851.3504562-CDS-M-pyrifera_M_contig9381:1108..13401622816851.3504562-CDS-M-pyrifera_M_contig9381:1108..1340Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 1109..1340 +
1692278215.9538898-CDS-M-pyrifera_M_contig9381:1108..13401692278215.9538898-CDS-M-pyrifera_M_contig9381:1108..1340Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 1109..1340 +
1622816851.3617945-CDS-M-pyrifera_M_contig9381:1699..18481622816851.3617945-CDS-M-pyrifera_M_contig9381:1699..1848Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 1700..1848 +
1692278215.9633462-CDS-M-pyrifera_M_contig9381:1699..18481692278215.9633462-CDS-M-pyrifera_M_contig9381:1699..1848Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 1700..1848 +
1622816851.3728254-CDS-M-pyrifera_M_contig9381:2175..22511622816851.3728254-CDS-M-pyrifera_M_contig9381:2175..2251Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 2176..2251 +
1692278215.980351-CDS-M-pyrifera_M_contig9381:2175..22511692278215.980351-CDS-M-pyrifera_M_contig9381:2175..2251Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9381 2176..2251 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9381.21659.1prot_M-pyrifera_M_contig9381.21659.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9381 159..2251 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9381.21659.1

>prot_M-pyrifera_M_contig9381.21659.1 ID=prot_M-pyrifera_M_contig9381.21659.1|Name=mRNA_M-pyrifera_M_contig9381.21659.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=243bp
MHTLRQSGPSGLYVGLPPWLTFALPRSAIRFTTFERVSGWLQEGQGEVHV
LNALAAGTLAGAIESATCLTPLQNIQIKMTQDADAPRQARMGFLHALSEI
PRREGLRKGFFSGLWPTVVKGAMNNCVRFGLFNEGGRALRRSRGDAPDEP
LGPGAVFGLGAAAGAVSAVVTHPIDTVKSNLQGLSAAKYSGSLDCARKIL
ASAGVSGLFRGLTPRITRVCLEIGLQFSLYDAICRVLDKKLE*
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mRNA from alignment at M-pyrifera_M_contig9381:138..2559+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9381.21659.1 ID=mRNA_M-pyrifera_M_contig9381.21659.1|Name=mRNA_M-pyrifera_M_contig9381.21659.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2422bp|location=Sequence derived from alignment at M-pyrifera_M_contig9381:138..2559+ (Macrocystis pyrifera P11B4 male)
CAGGGGCCCCTTCACTGTGCCATGCACACCCTTCGACAAAGTGGACCGAG CGGGCTGTACGTCGGCCTCCCGCCGTGGCTTACTTTTGCACTCCCCCGGT ACGAGCACGAGCGCGGAGCAACGCGCGCAAGGTTTGCTTGTCTTCGTATA CTCGTACTCCTGGAGTCTGACACGCACGCCGCAGATCCAACGCTGACGTT CGCATGCAACGTATCATAAACGAGCTACCAGGTGGCATATTGCAAGCATT GCATCAGGGGCCTCGACCAGAGTCGTCTATCTGCAGTATCTGCAGCTCTG CGTGCATCTCCCCCCCCCCCCCCGCCCCGCGTATTCATGCCCTTTTGTCC GTGTTTTCTTCTGTTGCTGCTGCTTCTTCTCTCGTGTCCACAACAACAGA TCTGCGATACGCTTCACCACGTTCGAGCGCGTGTCGGGGTGGCTGCAGGA AGGTCAGGGGGAAGTGCACGTCCTCAACGCGCTTGCGGCGGGTACCCTGG CCGGCGCCATCGAATCCGCGACGTGCCTCACCCCCCTCCAGAACATCCAG ATCAAGATGACCCAGGACGCCGACGCCCCGCGGCAGGCTCGCATGTACCG GTAAGGCCAGTGCCAAAGAAGTGACACGTGATTGTCTCGCGGGCGATCGG ACTGGCTGTACTCTTAGCGCAACACAATATCTCTTCATGTTTTCAGCGGT ATGTGCTTGTAGCGCCATGCGAGGAGCGCAAGCCTGTAAATGCTCACTCT GCTCGTGTGCTGCACAGAAAAGACTTCGAATGCGTCCTATAAAAGTGTCA TACAATCGCTATGGTACATTAATACGGTTTCGTACGTGGTATGTATCTGC TGCTTGTTGTGCTTTTTTTTAGGCTGATCTTTTTCGCCCGTCTCACATAC AGCAACCGATTCCCAGAGTAACGTGTCACCTATATTTCACCACCGTGTTT TGTCCGCTGTGTGTATGTTAGGGGGTTCCTTCACGCGCTGAGCGAGATTC CGCGACGAGAGGGGCTGCGCAAAGGGTTTTTTAGCGGCTTGTGGCCAACG GTGGTCAAGGGGGCGATGAACAACTGCGTTCGATTCGGACTGTTCAACGA GGGGGGAAGGGCTCTCCGAAGGTCGCGAGGGGACGCGCCAGACGAGCCGC TTGGACCGGGCGCGGTATTTGGTCTTGGAGCGGCCGCCGGTGCCGTCAGT GCGGTGAGTACGGGGAGGGGGGGCGTTGTTGTACGGATACCTACGGTAGG ACTGCTGTTGTCGTGACAATGACAACTGTACGTACGTCTGCGGGGAGTTC CTGTCGAGGCCGTTTTGTATATTGTTGCTGGAGAAATGCTGGAGAGAACG ATGCTTTTTTTTTTGCAACCTTTACGTTGCAGCATGGTTTACGTTGCAGG AGAAGCCCCCTTCGGTCACCAATCAACCTCTCGCAACCTTCAGGCCGACA ACAAAAGCATGTCGGGGGGTGTTACTCGTCCAGAAATATACAACCACATC GGTCGTAGCCCTACTGCAGCTGGTAACCCCACGGTGTTTCTGTTGGCGGT GCGAGTGCGCAGGTGGTGACGCATCCGATCGACACGGTCAAGTCTAACCT GCAAGGGCTCTCCGCAGCAAAATACTCGGGCAGCCTGGATTGCGCCAGAA AAATTTTGGCGTCTGCTGGCGTCTCTGGTCTCTTCCGCGGGTTAACACCC CGGATAACCAGGTGGGTTCGGCTGTCGGGGCTATTCGGTGGCTGTGTTTT CTACACATGTGTGGCACATTTTTAACGTCGGGAGGTCAGGCGCGAGCCGG ACGCAGTACAACCGCGTCATAATTTTAGCTGTTTTTGTTTCACGCGGCTG TTGTCAAGAGCGCTTGCGTACGCCTGGTGTCGATAGGGACTGACTTCGCC ACCTCTGTGGCACGAAAAGTCGAACATTGGCGAACAGCGGGTAACAACAA CAATCGCGCTTAGCTAGTCTAGCCAATCGATAATACTACCCCCCTTTCCC CTTGCTTTGCTGCTGTCGTCTTCCGCGCGTCTGCGCAGGGTGTGCCTAGA GATCGGCCTGCAATTTAGCCTTTACGACGCCATCTGCAGGGTTCTGGACA AGAAGTTGGAATGAGCGGGAGCCCAGCATGTGCTCCATGTTCTCAGCTTG TGCTCTGTATACTTCGCTGCTGTCGTGCAGTCTGGGACAAGTGTCTCATC GAACCTAAGCATGTTCGAATGTGGTTGTTCAACATTTTGGCAGTTTCATG ACTACCTGAATCATCTTCGTTCTTCGCCTAAGACTTGTCAACAAAGCATG CAGTATCAGTGCCGTGCGGGTGGTCATATTTGGACCTGTAAAAATACACC CACACCTAGTCAACTGAAGACGGTTGAAGGTGCGCCGCTCGCTCGCTCAT CTAATAATATAATAGTTACGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9381:138..2559+

>mRNA_M-pyrifera_M_contig9381.21659.1 ID=mRNA_M-pyrifera_M_contig9381.21659.1|Name=mRNA_M-pyrifera_M_contig9381.21659.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1458bp|location=Sequence derived from alignment at M-pyrifera_M_contig9381:138..2559+ (Macrocystis pyrifera P11B4 male)
ATGCACACCCTTCGACAAAGTGGACCGAGCGGGCTGTACGTCGGCCTCCC
GCCGTGGCTTACTTTTGCACTCCCCCGATGCACACCCTTCGACAAAGTGG
ACCGAGCGGGCTGTACGTCGGCCTCCCGCCGTGGCTTACTTTTGCACTCC
CCCGATCTGCGATACGCTTCACCACGTTCGAGCGCGTGTCGGGGTGGCTG
CAGGAAGGTCAGGGGGAAGTGCACGTCCTCAACGCGCTTGCGGCGGGTAC
CCTGGCCGGCGCCATCGAATCCGCGACGTGCCTCACCCCCCTCCAGAACA
TCCAGATCAAGATGACCCAGGACGCCGACGCCCCGCGGCAGGCTCGCATA
TCTGCGATACGCTTCACCACGTTCGAGCGCGTGTCGGGGTGGCTGCAGGA
AGGTCAGGGGGAAGTGCACGTCCTCAACGCGCTTGCGGCGGGTACCCTGG
CCGGCGCCATCGAATCCGCGACGTGCCTCACCCCCCTCCAGAACATCCAG
ATCAAGATGACCCAGGACGCCGACGCCCCGCGGCAGGCTCGCATGGGGTT
CCTTCACGCGCTGAGCGAGATTCCGCGACGAGAGGGGCTGCGCAAAGGGT
TTTTTAGCGGCTTGTGGCCAACGGTGGTCAAGGGGGCGATGAACAACTGC
GTTCGATTCGGACTGTTCAACGAGGGGGGAAGGGCTCTCCGAAGGTCGCG
AGGGGACGCGCCAGACGAGCCGCTTGGACCGGGCGCGGTATTTGGTCTTG
GAGCGGCCGCCGGTGCCGTCAGTGCGGGGGTTCCTTCACGCGCTGAGCGA
GATTCCGCGACGAGAGGGGCTGCGCAAAGGGTTTTTTAGCGGCTTGTGGC
CAACGGTGGTCAAGGGGGCGATGAACAACTGCGTTCGATTCGGACTGTTC
AACGAGGGGGGAAGGGCTCTCCGAAGGTCGCGAGGGGACGCGCCAGACGA
GCCGCTTGGACCGGGCGCGGTATTTGGTCTTGGAGCGGCCGCCGGTGCCG
TCAGTGCGGTGGTGACGCATCCGATCGACACGGTCAAGTCTAACCTGCAA
GGGCTCTCCGCAGCAAAATACTCGGGCAGCCTGGATTGCGCCAGAAAAAT
TTTGGCGTCTGCTGGCGTCTCTGGTCTCTTCCGCGGGTTAACACCCCGGA
TAACCAGGTGGTGACGCATCCGATCGACACGGTCAAGTCTAACCTGCAAG
GGCTCTCCGCAGCAAAATACTCGGGCAGCCTGGATTGCGCCAGAAAAATT
TTGGCGTCTGCTGGCGTCTCTGGTCTCTTCCGCGGGTTAACACCCCGGAT
AACCAGGGTGTGCCTAGAGATCGGCCTGCAATTTAGCCTTTACGACGCCA
TCTGCAGGGTTCTGGACAAGAAGTTGGAATGAGGTGTGCCTAGAGATCGG
CCTGCAATTTAGCCTTTACGACGCCATCTGCAGGGTTCTGGACAAGAAGT
TGGAATGA
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