mRNA_M-pyrifera_M_contig938.21658.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: D8LMW1_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW1_ECTSI) HSP 1 Score: 498 bits (1282), Expect = 2.170e-159 Identity = 445/820 (54.27%), Postives = 493/820 (60.12%), Query Frame = 1 Query: 1 NGAPVTAEDLALREDICYQIFGDVGSLVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLLENLRLKAKNDEENAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVARSVNF---CLRAAFGSHGGDG-------AVAVAEPCLKPVCSLICRV-DNWLPPSHPRAQTTSPLFKRPGRIDYQAAGPIRSPDGRTRGEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRRSSTLGLAVVGGEHEAPHSYSPYGSGXXXXXXXXXXXXXXXXSNSGRLHGAQRASPGVTAVITGAGRGGWGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGPQWRPRPGGPAGSR----GPREGGVRDRRGXXXXXXXXXXENKDGEGAQQQVSNGGKTKRGSGLARQGSKLWRIMRWNRGEAETEAEE---DPAADRRAMKEAIAAGR-GHTEVETAEFGVSVREFYERFFADDAPYGLPDFHMSRGDWEVDAGEWQQATEEGEXXXXXKAGISIDGGGV-------GGGVTRAIRFKTPLHITFMSSPGQVRTLKRQRSCFFGRQGCVVDTITTVEDRIPLSDNFHVEDRWIIRPAGKD-GS------ECTATVTWRCVWHKFTVIKGLIEGKCRSDVKSFNCAFLEGMREHLADKNPRTSKHRLSLRESLLTAAVXXXXXXXXXXRRASRERDRSFSSRSELSLFEASD 2361 NG VTAEDLALREDICYQIFGDVG L+RDFSCAWDHKVVMHGRMYVT+RRLCFYANFFGLEAKMSLRHED+ARC+KGNSAIFIPNV+VVQDKSGKDFVFR+FWERDECHSLLE LR +A + A G R+ ++ R AF S+GG G + A A P P S+ ++ + LP F R R+ + SP XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXX R + LGLAV+G +H+ P XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + +G G GGV E K+GE +QQ G K +GL RQGSKLW +MRW+ G A + DP ADR+AM+EAI+AG H EV TAEF VSV+EFYERF ADDAPY LPDFHMSRGDWEVDAGEWQ T+EGE D + GGGVTRAIRFKTPLHITFMSSPG VRTLKRQRS FG QGC+V+T TTVEDRIPL+DNFHVEDRWIIRPA D GS CTATVTWRCVWHKFTVIKGLIEGKCR+DVKSFN AFL+GMREHL + R K SLR++LL+ RR SR DRS S RS LS F S+ Sbjct: 50 NGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAKMLLQEADGDGGEDDRLLPPSGAPPDAAPGAGAGRRASSWDGEASRPAFQSNGGIGYPLLEDLSAATAPPVSPPPASVYQKLAPSALPRESSSXXXXEVSFGRRTRVRHSV-----SPXXXXXXXXXXXXXXXXXXXXXXXLPTSPRAMSXXXXXXXXXXXXXXXXXXXYSMTPGXXXXXXMVRASTIGSSCXXXXXXXVP-PRPAKLGLAVLGADHDLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAVEGAAESAKKAARTSGLEHREVGGNGGGV-----DGEVSEGKVQEQKEGEKDKQQAPEAGGRK--AGLVRQGSKLWNMMRWDSGGRAGGAGDGGVDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDAGEWQHTTKEGEGGGGAAGSTKGDXXXLRGPRPPGGGGVTRAIRFKTPLHITFMSSPGHVRTLKRQRSRVFGGQGCIVETQTTVEDRIPLNDNFHVEDRWIIRPAADDEGSGTGGKPRCTATVTWRCVWHKFTVIKGLIEGKCRADVKSFNIAFLQGMREHLESEGARGIKRCPSLRDALLSVGSG---------RRISR--DRSLSGRSLLSPFADSE 845
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: A0A6H5KHE3_9PHAE (VASt domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE3_9PHAE) HSP 1 Score: 480 bits (1236), Expect = 4.720e-152 Identity = 449/851 (52.76%), Postives = 500/851 (58.75%), Query Frame = 1 Query: 1 NGAPVTAEDLALREDICYQIFGDVGSLVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLLENLRLKAKNDEENAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVARSVNF---CLRAAFGSH---------------GGDG-------AVAVAEPCLKPVCSLICRV-DNWLPPSHPRAQTTSPLFKRPGRIDYQAAGPIRSPDGRTRGEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRRSSTLGLAVVGGEHEAPHSYSPYGSGXXXXXXXXXXXXXXXXSNSGRLHGAQRASPGVTAVITGAGRGGWGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGPQWRPRPGGPAGSRGPREGGVRDRRGXXXXXXXXXXENKDGEGAQQQVSNGGKTK--------RGSGLARQGSKLWRIMRWNRGEAETEAEE---DPAADRRAMKEAIAAGR-GHTEVETAEFGVSVREFYERFFADDAPYGLPDFHMSRGDWEVDAGEWQQATEEGEXXXXXKAGISIDGGGVGGG-------------------VTRAIRFKTPLHITFMSSPGQVRTLKRQRSCFFGRQGCVVDTITTVEDRIPLSDNFHVEDRWIIRPAGKD---GS----ECTATVTWRCVWHKFTVIKGLIEGKCRSDVKSFNCAFLEGMREHLADKNPRTSKHRLSLRESLLTAAVXXXXXXXXXXRRASRERDRSFSSRSELSLFEASD 2361 NG VTAEDLALREDICYQIFGDVG L+RDFSCAWDHKVVMHGRMYVT+RRLCFYANFFGLEAKMSLRHED+ARC+KGNSAIFIPNV+VVQDKSGKDFVFR+FWERDECHSLLE+LR +A + A G R+ ++ R F S+ GG G + A P P S+ ++ + LP + ++ F R R+ + SP XXXXXXXXXXXXXX XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX R + LGLAV+G +H+ P XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G + + R G+ R+ + + EG Q+ + G K K R +GL RQGSKLW +MRW+ G A E DP ADR+AM+EAI+AG H EV TAEF VSV+EFYERF ADDAPY LPDFHMSRGDWEVDA EWQQ TEEGE GGG G VTRAIRFKTPLHITFMSSPG VRTLKRQRS FFG QGC+V+T TTVEDRIPLSDNFHVEDRWIIRPA D GS CTATVTWRCVWHKFTVIKGLIEGKCR+DVKSFN AFL+GMREHL + R K SLR++LL+ RR S DRS S RS LS F S+ Sbjct: 28 NGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEDLRREAGDVLARAEQAKFKTLVEDADGDGGEGDRQLPPSGTSSDAAQGSGAGWRANSWDGEASRPGFQSNVGVFLSGHQRASWRPGGSGYPLVEDLSATTASPVSPPPASVSQKLAPSALPRESSSSSSSEVSFGRRPRVRHSV-----SPXXXXXXXXXXXXXXXXXXXXXXXXLPTSPRGMSAAPAXXXXXXXXXXXRSYSMTPGXXXXXXXXXXXXXXXXXXXXXXXXXVP-PRPAKLGLAVLGADHDMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAAVEGAA-------ESAKKAARTSGLEHRK---AGGNGGGVDGEVSEGKAQEQAEGEKGKQLAAEAGGRKAGLVRQGSKLWNMMRWDSGGRAGGAGEGGGDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDASEWQQTTEEGEG-----------GGGATGSTKXXXXXXXXXXXXXXXXXVTRAIRFKTPLHITFMSSPGHVRTLKRQRSRFFGGQGCIVETQTTVEDRIPLSDNFHVEDRWIIRPAADDEGSGSAGKPRCTATVTWRCVWHKFTVIKGLIEGKCRADVKSFNIAFLQGMREHLESEGARGIKRCPSLRDALLSVGSG---------RRISI--DRSLSGRSLLSPFADSE 840
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: A0A8J2ST97_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST97_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.580e-24 Identity = 52/103 (50.49%), Postives = 76/103 (73.79%), Query Frame = 1 Query: 31 ALREDICYQIFGDVGSLVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLL 339 A R++I IFGDVG++ RDFSCA + K+++HGR+YVT+R +CFY+N FG E K+ + + + K N+A+FIPN I V + K++VFRSFW+RD+C +LL Sbjct: 44 AWRDEIVRTIFGDVGAIRRDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHVTCVTKENTAVFIPNAIAVIT-ARKEYVFRSFWDRDDCFNLL 145
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: A0A7S3NLX8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLX8_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.240e-22 Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 37 REDICYQIFGDVGSLVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLLENL 348 R++I IFGDVG++ RDFSCA + K+++HGR+YVT+R +CFY+N FG E K+ + + I K +A+FIPN I V + K+++FRSFW+RDEC+ +L+ + Sbjct: 150 RDEIVRTIFGDVGAIRRDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSYITCITKEYTAVFIPNAIAVIT-ARKEYIFRSFWDRDECYDVLKQM 252
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: W7TDU9_9STRA (Gram domain-containing protein 1a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDU9_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.620e-21 Identity = 50/105 (47.62%), Postives = 76/105 (72.38%), Query Frame = 1 Query: 16 TAEDLALREDICYQIFGD-VGSLVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDEC 327 T ED + R++I QIFG+ +G + D SCA + K+++HGR+Y+TD+ +CFY+NFFG E K+ + + +KGN+A+ IPN I++Q GK++ FRSFW+RDEC Sbjct: 95 TPED-SFRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTH-GKEYCFRSFWDRDEC 197
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: A0A7S2STC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STC3_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.810e-21 Identity = 50/101 (49.50%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 37 REDICYQIFGDVGSLVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLL 339 R +I IFGDVG++ +DFSCA + K+++HGRMYVTD+ +CFY+N FG E K+ + + IA K +A+FIPN I V +++ FRSFW+RDE LL Sbjct: 27 RNEIVRTIFGDVGTIKKDFSCAVERKILLHGRMYVTDKFICFYSNLFGFEKKIKIPYSHIACVTKEYTAVFIPNAIAVITAK-REYFFRSFWDRDEAFHLL 126
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: F0Y4G3_AURAN (GRAM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4G3_AURAN) HSP 1 Score: 97.1 bits (240), Expect = 1.180e-20 Identity = 43/85 (50.59%), Postives = 61/85 (71.76%), Query Frame = 1 Query: 85 RDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLL 339 RDFSCA + K+++HGR+YVT+R +CFY+N FG E K+ + + I K +A+FIPN I V + K++VFRSFW+RD+C LL Sbjct: 1 RDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHITCITKEYTAVFIPNAIAVIT-ARKEYVFRSFWDRDDCFDLL 84
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 1.510e-17 Identity = 47/110 (42.73%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 37 REDICYQIFGDVGSLVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLLENLRLKAKN 366 REDI IFG+VG V DFSCA + ++++HGRMYVT+ +CFY+N FG E + + + K +A+FIPN I + S K+++FRSFW+R++ L+ + A N Sbjct: 58 REDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIIT-SKKEYIFRSFWDREDAFKTLKQCQQDASN 166
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 5.470e-17 Identity = 46/110 (41.82%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 37 REDICYQIFGDVGSLVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLLENLRLKAKN 366 REDI IFG+VG V DFSCA + ++++HGRMYVT+ +CFY+N FG E + + + K +A+FIPN I + S K+++FRSFW+R++ L+ + A + Sbjct: 19 REDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIIT-SKKEYIFRSFWDREDAFKTLKQCQQDASS 127
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Match: UPI00096B58A2 (LOW QUALITY PROTEIN: GRAM domain-containing protein 1B-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B58A2) HSP 1 Score: 83.2 bits (204), Expect = 1.080e-12 Identity = 39/104 (37.50%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 37 REDICYQIFGDVGS---LVRDFSCAWDHKVVMHGRMYVTDRRLCFYANFFGLEAKMSLRHEDIARCNKGNSAIFIPNVIVVQDKSGKDFVFRSFWERDECHSLL 339 R + +IF DV LV D+SCA ++++HGR+YVT LCFYAN FG E +S++ +++ +K +A+ IPN +++ ++ + F F SF RD+ + +L Sbjct: 127 RSEDFKRIFKDVPDDERLVVDYSCALQKEILVHGRLYVTQNYLCFYANIFGWETNVSMKWKEVTSISKEKTALVIPNAVLISTRADQKFFFTSFVARDKTYIML 230 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig938.21658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig938.21658.1 >prot_M-pyrifera_M_contig938.21658.1 ID=prot_M-pyrifera_M_contig938.21658.1|Name=mRNA_M-pyrifera_M_contig938.21658.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=798bp NGAPVTAEDLALREDICYQIFGDVGSLVRDFSCAWDHKVVMHGRMYVTDRback to top mRNA from alignment at M-pyrifera_M_contig938:16335..29321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig938.21658.1 ID=mRNA_M-pyrifera_M_contig938.21658.1|Name=mRNA_M-pyrifera_M_contig938.21658.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=12987bp|location=Sequence derived from alignment at M-pyrifera_M_contig938:16335..29321- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig938:16335..29321- >mRNA_M-pyrifera_M_contig938.21658.1 ID=mRNA_M-pyrifera_M_contig938.21658.1|Name=mRNA_M-pyrifera_M_contig938.21658.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4788bp|location=Sequence derived from alignment at M-pyrifera_M_contig938:16335..29321- (Macrocystis pyrifera P11B4 male)back to top |