mRNA_M-pyrifera_M_contig93631.21626.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93631.21626.1
Unique NamemRNA_M-pyrifera_M_contig93631.21626.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: A0A388KSK6_CHABU (Calreticulin n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KSK6_CHABU)

HSP 1 Score: 152 bits (383), Expect = 9.930e-42
Identity = 74/122 (60.66%), Postives = 94/122 (77.05%), Query Frame = 1
Query:   25 VLILALVAMVSATVYFEETFDGSYADRWVNSNNKGAE--AGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            V +L   ++V+ATV FEE FD ++  RWV S+ K +E  AG W H+AG+++ DP++DKGIQTT D RF+  SA FPEFSN+G+TLVLQFSVKHEQ++DCGGGY+KLLP G D   F GDTPY
Sbjct:    8 VALLGCFSVVAATVAFEERFDDTWDKRWVVSSWKKSEGTAGQWKHTAGKWYGDPEEDKGIQTTPDARFFAISAGFPEFSNKGKTLVLQFSVKHEQDIDCGGGYVKLLPDGGDMASFGGDTPY 129          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: A0A7J9CV67_GOSGO (Uncharacterized protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J9CV67_GOSGO)

HSP 1 Score: 140 bits (353), Expect = 2.300e-40
Identity = 70/121 (57.85%), Postives = 91/121 (75.21%), Query Frame = 1
Query:   28 LILALVAMVSATVYFEETFDGSYADRWVNSNNKGAE--AGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            ++L+LVA+ SA V+FEE F+  +  RWV S+ K  E  AG W++++G++  DP+ DKGIQT+ DYRFY  SA FPE +N+G+TLV QFSVKHEQ LDCGGGY+KLL    DQ+ F GDTPY
Sbjct:   18 ILLSLVAIASAEVFFEERFEDGWESRWVKSDWKKDENMAGEWNYTSGKWNGDPN-DKGIQTSEDYRFYAISAEFPEVNNKGKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPY 137          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: A0A1S3IFM4_LINUN (Calreticulin n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IFM4_LINUN)

HSP 1 Score: 146 bits (369), Expect = 4.050e-40
Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = 1
Query:   46 AMVSATVYFEETFDGSYADRWVNSNNKGAEAGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            A+   T+YFEE F   +  RWV S +KGAE G + HSAG+F+ D + DKGIQT+ D RFY  SA F +FSNEG+TLV+QF+VKHEQN+DCGGGY+K+ P+  DQ D  GD+PY
Sbjct:   14 ALSEPTIYFEERFGDGWEKRWVESTHKGAEQGKFVHSAGKFYGDAELDKGIQTSQDARFYGLSAAFDKFSNEGKTLVIQFTVKHEQNIDCGGGYVKVFPSTLDQGDMHGDSPY 126          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: D8R5B2_SELML (Calreticulin n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5B2_SELML)

HSP 1 Score: 147 bits (370), Expect = 4.340e-40
Identity = 73/121 (60.33%), Postives = 90/121 (74.38%), Query Frame = 1
Query:   28 LILALVAMVSATVYFEETFDGSYADRWVNSNNKGAE--AGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            L+L L ++  A V+FEE FD S+  RWV S+ K +E  AG W H+AG++F D + DKGIQT+ D RFY  SA FPEFSN+ +TLV+QFSVKHEQNLDCGGGYIK+L    DQ+ F GDTPY
Sbjct:   11 LLLLLSSLCHAKVFFEERFDDSWESRWVKSDWKKSEDAAGEWIHTAGKWFGDAEADKGIQTSPDARFYAISAEFPEFSNKDKTLVVQFSVKHEQNLDCGGGYIKILGGDVDQKTFGGDTPY 131          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: C6TBV7_SOYBN (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=C6TBV7_SOYBN)

HSP 1 Score: 142 bits (357), Expect = 4.980e-40
Identity = 70/120 (58.33%), Postives = 91/120 (75.83%), Query Frame = 1
Query:   31 ILALVAMVSATVYFEETFDGSYADRWVNSNNKGAE--AGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            +L+L+++ SA V+FEE FD  + +RWV S+ K  E  AG W+H++G++  D + DKGIQT+ DYRFY  SA +PEFSN+G+TLV QFSVKHEQ LDCGGGY+KLL    DQ+ F GDTPY
Sbjct:   15 LLSLLSIASANVFFEERFDDGWENRWVKSDWKKDENVAGEWNHTSGQWSGDAN-DKGIQTSEDYRFYAISAEYPEFSNKGKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPY 133          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: Q9FYV2_PINTA (Calreticulin n=2 Tax=Pinaceae TaxID=3318 RepID=Q9FYV2_PINTA)

HSP 1 Score: 147 bits (371), Expect = 4.990e-40
Identity = 75/123 (60.98%), Postives = 93/123 (75.61%), Query Frame = 1
Query:   22 AVLILALVAMVSATVYFEETFDGSYADRWVNSNNKGAE--AGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            AV +L  V +VSA V+FEE FD S+  RWV S+ K  E  AG W H++G++  DP+ DKGIQT TDYRF+  SA +PEFSN+ +TLVLQFSVKHEQ LDCGGGY+KLL    DQ++FSG+TPY
Sbjct:   10 AVFLLLFVTLVSAEVFFEERFDDSWESRWVQSDWKKDESLAGDWVHTSGKWNGDPN-DKGIQTHTDYRFFAISAAYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLSGEIDQKNFSGETPY 131          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: Q9U6S0_STRPU (Calreticulin n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=Q9U6S0_STRPU)

HSP 1 Score: 147 bits (370), Expect = 6.290e-40
Identity = 72/125 (57.60%), Postives = 92/125 (73.60%), Query Frame = 1
Query:   13 TVAAVLILALVAMVSATVYFEETF-DGSYADRWVNSNNKGAEAGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            T+ A L L LVA  +A VYFE+ F D S+  RWV S +KG++AG +  SAG+F+ D +QDKGIQT+ D +FY  SA F +FSNEG+ LV+QF+VKHEQ +DCGGGY K+ PA  DQED  GD+PY
Sbjct:    3 TILACLCLMLVAFTNAEVYFEDQFADASWESRWVESVHKGSDAGKFKWSAGKFYGDAEQDKGIQTSQDAKFYGLSAKFTDFSNEGKDLVIQFTVKHEQKIDCGGGYAKIFPADLDQEDMHGDSPY 127          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: A0A7S1DQC2_HEMAN (Calreticulin n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DQC2_HEMAN)

HSP 1 Score: 146 bits (369), Expect = 7.770e-40
Identity = 71/123 (57.72%), Postives = 93/123 (75.61%), Query Frame = 1
Query:   19 AAVLILALVAM-VSATVYFEETFDGSYADRWVNSNNKGAEAGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            AA+ + AL+A+ VS  V+FEE FD  + DRWV S  K  + GAW ++AG+++ DPD +KG+QTTTDYR+Y  SA   +F+N+G+TLVLQ++VKHEQNLDCGGGYIKL P G DQ  F GD+ Y
Sbjct:   15 AALALTALMAVAVSGEVFFEENFDAGWEDRWVKSTFKAGDEGAWGNTAGKYYGDPD-NKGLQTTTDYRWYDISAKTKDFNNKGKTLVLQYTVKHEQNLDCGGGYIKLAPKGVDQSKFGGDSDY 136          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: A0A8B7ZEW8_ACAPL (Calreticulin n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZEW8_ACAPL)

HSP 1 Score: 146 bits (369), Expect = 9.640e-40
Identity = 65/116 (56.03%), Postives = 89/116 (76.72%), Query Frame = 1
Query:   37 ALVAMVSATVYFEETFDGSYADRWVNSNNKGAEAGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            AL+++ SATVYF++ FDG +A+RWVNS +K  + G +  SAG+F+ DP++DKG+QT+ D +FY  S+ F  FSNEG+ LV+QFSVKHEQ +DCGGGY+K+ P   DQ D  GD+PY
Sbjct:   10 ALISLCSATVYFQDQFDGDWAERWVNSEHKD-DLGKFKLSAGKFYNDPEKDKGLQTSQDAKFYAISSKFDSFSNEGKDLVIQFSVKHEQKIDCGGGYVKVFPGDLDQSDMHGDSPY 124          
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Match: A0A2I4EA27_JUGRE (Calreticulin n=20 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4EA27_JUGRE)

HSP 1 Score: 146 bits (368), Expect = 1.300e-39
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 1
Query:   31 ILALVAMVSATVYFEETFDGSYADRWVNSNNKGAE--AGAWSHSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHEQNLDCGGGYIKLLPAGFDQEDFSGDTPY 384
            +L+L+A+ SA V+FEE FD  +  RWV S+ K  E  AG W+++AG++  DP+ DKGIQT+ DYRFY  SA FPEFSN+ + LV QFSVKHEQ LDCGGGY+KLL AG DQ+ F GDTPY
Sbjct:   15 LLSLLAITSAKVFFEERFDDGWESRWVTSDWKKDENVAGEWNYTAGKWHGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKVLVFQFSVKHEQKLDCGGGYMKLLSAGIDQKKFGGDTPY 133          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93631.21626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A388KSK6_CHABU9.930e-4260.66Calreticulin n=1 Tax=Chara braunii TaxID=69332 Rep... [more]
A0A7J9CV67_GOSGO2.300e-4057.85Uncharacterized protein n=4 Tax=Gossypium TaxID=36... [more]
A0A1S3IFM4_LINUN4.050e-4058.41Calreticulin n=1 Tax=Lingula unguis TaxID=7574 Rep... [more]
D8R5B2_SELML4.340e-4060.33Calreticulin n=3 Tax=Selaginella moellendorffii Ta... [more]
C6TBV7_SOYBN4.980e-4058.33Uncharacterized protein n=2 Tax=cellular organisms... [more]
Q9FYV2_PINTA4.990e-4060.98Calreticulin n=2 Tax=Pinaceae TaxID=3318 RepID=Q9F... [more]
Q9U6S0_STRPU6.290e-4057.60Calreticulin n=2 Tax=Strongylocentrotus purpuratus... [more]
A0A7S1DQC2_HEMAN7.770e-4057.72Calreticulin n=2 Tax=Hemiselmis andersenii TaxID=4... [more]
A0A8B7ZEW8_ACAPL9.640e-4056.03Calreticulin n=1 Tax=Acanthaster planci TaxID=1334... [more]
A0A2I4EA27_JUGRE1.300e-3960.83Calreticulin n=20 Tax=Juglandaceae TaxID=16714 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93631contigM-pyrifera_M_contig93631:29..493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score148.3
Seed ortholog evalue2.5e-33
Seed eggNOG ortholog7668.SPU_004887-tr
Preferred nameCALR
KEGG koko:K08057
KEGG Pathwayko04141,ko04145,ko04612,ko05142,ko05166,map04141,map04145,map04612,map05142,map05166
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000122,GO:0001669,GO:0001846,GO:0001848,GO:0001849,GO:0002376,GO:0002396,GO:0002397,GO:0002474,GO:0002478,GO:0002479,GO:0002501,GO:0002502,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0005102,GO:0005178,GO:0005488,GO:0005506,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005790,GO:0005793,GO:0005794,GO:0005829,GO:0005844,GO:0005886,GO:0006355,GO:0006357,GO:0006417,GO:0006457,GO:0006611,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006897,GO:0006898,GO:0006906,GO:0006913,GO:0006950,GO:0006984,GO:0006986,GO:0006996,GO:0007010,GO:0007044,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007422,GO:0007507,GO:0007568,GO:0007569,GO:0007588,GO:0007610,GO:0007635,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008284,GO:0009266,GO:0009408,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009755,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009897,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010226,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010594,GO:0010595,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010632,GO:0010634,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010770,GO:0010810,GO:0010811,GO:0010941,GO:0010948,GO:0012501,GO:0012505,GO:0012506,GO:0014070,GO:0014706,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016528,GO:0016529,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019884,GO:0019899,GO:0019953,GO:0022008,GO:0022414,GO:0022417,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030003,GO:0030029,GO:0030036,GO:0030100,GO:0030139,GO:0030141,GO:0030154,GO:0030155,GO:0030176,GO:0030246,GO:0030334,GO:0030335,GO:0030336,GO:0030421,GO:0030431,GO:0030496,GO:0030518,GO:0030522,GO:0030659,GO:0030666,GO:0030670,GO:0030865,GO:0030866,GO:0030968,GO:0031012,GO:0031090,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031581,GO:0031625,GO:0031647,GO:0031958,GO:0031967,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0031984,GO:0032101,GO:0032103,GO:0032268,GO:0032269,GO:0032355,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033143,GO:0033144,GO:0033218,GO:0033365,GO:0033554,GO:0033574,GO:0033993,GO:0034248,GO:0034249,GO:0034329,GO:0034330,GO:0034504,GO:0034613,GO:0034620,GO:0034622,GO:0034975,GO:0034976,GO:0035051,GO:0035257,GO:0035258,GO:0035966,GO:0035967,GO:0036500,GO:0040012,GO:0040013,GO:0040017,GO:0040020,GO:0042048,GO:0042127,GO:0042175,GO:0042221,GO:0042277,GO:0042493,GO:0042562,GO:0042590,GO:0042592,GO:0042692,GO:0042824,GO:0042886,GO:0042921,GO:0042981,GO:0043067,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044183,GO:0044238,GO:0044322,GO:0044389,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044877,GO:0045169,GO:0045184,GO:0045335,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045785,GO:0045786,GO:0045787,GO:0045807,GO:0045892,GO:0045934,GO:0046677,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048232,GO:0048284,GO:0048385,GO:0048387,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048699,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0048878,GO:0050681,GO:0050764,GO:0050766,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050821,GO:0050839,GO:0050896,GO:0050920,GO:0050921,GO:0051049,GO:0051050,GO:0051082,GO:0051087,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051146,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051208,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051270,GO:0051271,GO:0051272,GO:0051427,GO:0051445,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051961,GO:0055007,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060205,GO:0060255,GO:0060284,GO:0060537,GO:0060627,GO:0061024,GO:0061025,GO:0061061,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070887,GO:0071156,GO:0071157,GO:0071241,GO:0071248,GO:0071285,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071556,GO:0071682,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0080090,GO:0090174,GO:0090398,GO:0097159,GO:0097223,GO:0097305,GO:0097708,GO:0098552,GO:0098553,GO:0098588,GO:0098657,GO:0098771,GO:0098796,GO:0098805,GO:0098827,GO:0099503,GO:1900024,GO:1900026,GO:1901163,GO:1901164,GO:1901222,GO:1901224,GO:1901363,GO:1901564,GO:1901654,GO:1901700,GO:1902531,GO:1902533,GO:1902679,GO:1903506,GO:1903507,GO:1990668,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2000147,GO:2000241,GO:2000242,GO:2000508,GO:2000510,GO:2001141
EggNOG free text desc.peptide antigen assembly with MHC class I protein complex
EggNOG OGs38DI3@33154,3BFR1@33208,3CX8Y@33213,KOG0674@1,KOG0674@2759
COG Functional cat.O
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110,ko04091
Exons2
Model size384
Cds size384
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816849.2534435-CDS-M-pyrifera_M_contig93631:28..3241622816849.2534435-CDS-M-pyrifera_M_contig93631:28..324Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93631 29..324 -
1692278214.5887804-CDS-M-pyrifera_M_contig93631:28..3241692278214.5887804-CDS-M-pyrifera_M_contig93631:28..324Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93631 29..324 -
1622816849.2654371-CDS-M-pyrifera_M_contig93631:405..4931622816849.2654371-CDS-M-pyrifera_M_contig93631:405..493Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93631 406..493 -
1692278214.6078224-CDS-M-pyrifera_M_contig93631:405..4931692278214.6078224-CDS-M-pyrifera_M_contig93631:405..493Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93631 406..493 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93631.21626.1prot_M-pyrifera_M_contig93631.21626.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93631 29..493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93631.21626.1

>prot_M-pyrifera_M_contig93631.21626.1 ID=prot_M-pyrifera_M_contig93631.21626.1|Name=mRNA_M-pyrifera_M_contig93631.21626.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp
MARFTVAAVLILALVAMVSATVYFEETFDGSYADRWVNSNNKGAEAGAWS
HSAGRFFRDPDQDKGIQTTTDYRFYQTSAVFPEFSNEGETLVLQFSVKHE
QNLDCGGGYIKLLPAGFDQEDFSGDTPY
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mRNA from alignment at M-pyrifera_M_contig93631:29..493-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93631.21626.1 ID=mRNA_M-pyrifera_M_contig93631.21626.1|Name=mRNA_M-pyrifera_M_contig93631.21626.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig93631:29..493- (Macrocystis pyrifera P11B4 male)
ATGGCTCGTTTCACCGTTGCAGCTGTGCTCATCCTTGCCCTTGTGGCAAT GGTGAGTGCCACTGTCTACTTCGAGGAGACCTTCGATGGTGAGTTAGTTC TCCCTGGATGGCCAGCGCGCCAACACGCACACAAATGGGCACAGCACTGA CAAAAGTTTGTGGCTGTAGGCTCTTACGCTGACCGCTGGGTCAACTCCAA CAACAAGGGAGCTGAGGCTGGCGCGTGGTCCCACTCTGCCGGCCGCTTCT TCCGCGACCCCGACCAGGACAAGGGCATCCAGACAACCACTGACTACCGC TTCTACCAGACCTCTGCAGTTTTCCCCGAGTTCTCCAACGAGGGTGAGAC TCTCGTCCTTCAGTTCTCCGTCAAGCACGAGCAGAACCTCGACTGCGGCG GCGGCTACATCAAGCTTCTCCCCGCTGGATTCGACCAGGAGGACTTCAGT GGAGACACTCCCTAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93631:29..493-

>mRNA_M-pyrifera_M_contig93631.21626.1 ID=mRNA_M-pyrifera_M_contig93631.21626.1|Name=mRNA_M-pyrifera_M_contig93631.21626.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig93631:29..493- (Macrocystis pyrifera P11B4 male)
ATGGCTCGTTTCACCGTTGCAGCTGTGCTCATCCTTGCCCTTGTGGCAAT
GGTGAGTGCCACTGTCTACTTCGAGGAGACCTTCGATGATGGCTCGTTTC
ACCGTTGCAGCTGTGCTCATCCTTGCCCTTGTGGCAATGGTGAGTGCCAC
TGTCTACTTCGAGGAGACCTTCGATGGCTCTTACGCTGACCGCTGGGTCA
ACTCCAACAACAAGGGAGCTGAGGCTGGCGCGTGGTCCCACTCTGCCGGC
CGCTTCTTCCGCGACCCCGACCAGGACAAGGGCATCCAGACAACCACTGA
CTACCGCTTCTACCAGACCTCTGCAGTTTTCCCCGAGTTCTCCAACGAGG
GTGAGACTCTCGTCCTTCAGTTCTCCGTCAAGCACGAGCAGAACCTCGAC
TGCGGCGGCGGCTACATCAAGCTTCTCCCCGCTGGATTCGACCAGGAGGA
CTTCAGTGGAGACACTCCCTACGCTCTTACGCTGACCGCTGGGTCAACTC
CAACAACAAGGGAGCTGAGGCTGGCGCGTGGTCCCACTCTGCCGGCCGCT
TCTTCCGCGACCCCGACCAGGACAAGGGCATCCAGACAACCACTGACTAC
CGCTTCTACCAGACCTCTGCAGTTTTCCCCGAGTTCTCCAACGAGGGTGA
GACTCTCGTCCTTCAGTTCTCCGTCAAGCACGAGCAGAACCTCGACTGCG
GCGGCGGCTACATCAAGCTTCTCCCCGCTGGATTCGACCAGGAGGACTTC
AGTGGAGACACTCCCTAC
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