mRNA_M-pyrifera_M_contig9360.21620.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9360.21620.1
Unique NamemRNA_M-pyrifera_M_contig9360.21620.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: D7FTR7_ECTSI (Cathepsin L-like proteinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTR7_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 3.570e-88
Identity = 140/169 (82.84%), Postives = 151/169 (89.35%), Query Frame = 2 
Query:    2 QELVDCDSYDMGCNGGLMDNSFHWIQQNHGICSEADYPYKAISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILEQASYPILA 508
            QELVDCD+YDMGCNGGLMD SFHWIQQN GICSE DYPY A  D C+KS+C+VV GT VDKW+DV  D E+ALM AVAQQPVSIAIEAD+MSFQLYSGGVLTA+CGTNLDHGVLLVGYGVSEDG+KYWKVKNSWG +WG  GYILL REA QEGGECGILEQASYP+LA
Sbjct:  307 QELVDCDTYDMGCNGGLMDYSFHWIQQNGGICSEEDYPYTAAGDLCKKSTCDVVEGTMVDKWVDVASDDEQALMEAVAQQPVSIAIEADQMSFQLYSGGVLTAACGTNLDHGVLLVGYGVSEDGVKYWKVKNSWGPEWGAEGYILLKREADQEGGECGILEQASYPVLA 475
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A835ZFS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS5_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.930e-73
Identity = 116/168 (69.05%), Postives = 137/168 (81.55%), Query Frame = 2 
Query:    2 QELVDCDSYDMGCNGGLMDNSFHWIQQNHGICSEADYPYKAISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILEQASYPIL 505
            Q LVDCDSYD GC GGLMD SFHWIQ+N GIC+EADYPY+AI+D+C+  +C VVPGT+V  W+DVD D  ++LM AV +QPVS+AIEADE +FQ YSGGVL   CGT+LDHGVLLVGYG +EDG+ YW +KNSWG  WG  GYI + R APQEGGECGIL+ ASYP+L
Sbjct:  186 QMLVDCDSYDSGCGGGLMDFSFHWIQENGGICAEADYPYEAINDQCKSDACKVVPGTNVASWVDVDQDM-KSLMKAVKKQPVSVAIEADESAFQFYSGGVLMNGCGTSLDHGVLLVGYGTTEDGVDYWTLKNSWGPSWGDAGYIRVLRGAPQEGGECGILQSASYPVL 352
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A7S2XZA5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZA5_9STRA)

HSP 1 Score: 229 bits (584), Expect = 6.570e-65
Identity = 109/168 (64.88%), Postives = 129/168 (76.79%), Query Frame = 2 
Query:    2 QELVDCDSYDMGCNGGLMDNSFHWIQQNHGICSEADYPYKAISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILEQASYPIL 505
            QELVDCD  D+GCNGGLMDN+F +I+ NHG+C+EA YPY A    C K SC+ V G+ V  W+DV+  +E ALM AV +QPV+IAIEAD+ SFQ YS GV T SCGTNLDHGVLLVGYG SEDG  YWKVKNSWG  WG  G+ILL +   QEGG+CG+L Q+SYP+L
Sbjct:  169 QELVDCDQVDLGCNGGLMDNAFDFIKTNHGLCTEAAYPYSAQDSSCNKWSCDSVKGSSVKSWVDVEP-TESALMQAVNRQPVAIAIEADQFSFQFYSSGVFTGSCGTNLDHGVLLVGYG-SEDGQDYWKVKNSWGESWGQNGFILLGKNVEQEGGQCGLLLQSSYPVL 334
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A6T5MXB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MXB9_HETAK)

HSP 1 Score: 210 bits (535), Expect = 8.710e-58
Identity = 101/166 (60.84%), Postives = 120/166 (72.29%), Query Frame = 2 
Query:    2 QELVDCDSYDMGCNGGLMDNSFHWIQQNHGICSEADYPYKAISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILEQASYP 499
            Q LVDCD  D+GCNGGLMDN+F WI+ N G+CSE  YPY A  + C+  SC  V  ++   W+D+D  SE+ALM AVAQ PV+IAIEAD+M+FQ YS GV T SCGT+LDHGVL VGYG  E G +YW VKNSWG  WG  GYI L +   QEGG+CG+  QASYP
Sbjct:  180 QMLVDCDYEDLGCNGGLMDNAFEWIEDNGGLCSEHAYPYIAKKESCRDWSCTPVSHSNPTGWVDIDQ-SEKALMEAVAQTPVAIAIEADQMAFQFYSDGVFTGSCGTSLDHGVLAVGYGKDESGQEYWIVKNSWGDSWGKDGYIYLEKGKDQEGGQCGLYLQASYP 344
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A2R5GUW4_9STRA (Cysteine proteinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUW4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.090e-57
Identity = 105/172 (61.05%), Postives = 124/172 (72.09%), Query Frame = 2 
Query:    2 QELVDCDSYDMGCNGGLMDNSFHWIQQNHGICSEADYPYKAISD----ECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILEQASYPIL 505
            QELV+CD  D GCNGGLMDN+F WI +N G+CSE DYPYK+ S      C+  SC+ V G+    ++DV H SE +L  AVAQQPV+IAIEAD+++FQ Y  GVL  SCG+ LDHGVL VGYG   DG KYWKVKNSWGG WGM GYIL+ R     GGECG+L  ASYP+L
Sbjct:  312 QELVNCDHVDQGCNGGLMDNAFRWIIENGGLCSEEDYPYKSGSGFAPRTCKVDSCSTVEGSAPQSFVDVKH-SEMSLEEAVAQQPVAIAIEADQLAFQFYRKGVLVGSCGSRLDHGVLAVGYGTWTDGKKYWKVKNSWGGTWGMNGYILIQRGKHVRGGECGLLLSASYPVL 482
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A7S2GCU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCU1_9STRA)

HSP 1 Score: 202 bits (513), Expect = 8.110e-55
Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 2 
Query:    2 QELVDCDSYDMGCNGGLMDNSFHWIQQNHGICSEADYPYKA---ISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILEQASYPIL 505
            Q+LV CD+ D GCNGGLMD +F W+  N G+C E+DY Y +    +  C  S C+   GT    + DV+ +SEEALM+AVAQQPVS+AI+A+++SFQLYS GVLT  CGT+LDHGVL  GYG   DG  YWKVKNSWG  WGM GYIL+ R   Q GG+CGIL  ASYP L
Sbjct:  168 QQLVSCDTTDAGCNGGLMDTAFEWVMGNGGLCEESDYAYTSGGGTTGTCV-SGCSPYAGTTPSGYTDVE-ESEEALMSAVAQQPVSVAIQANQLSFQLYSSGVLTGRCGTSLDHGVLAAGYGTYTDGTDYWKVKNSWGSSWGMDGYILIERGNSQTGGQCGILMSASYPTL 336
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A813AYG5_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AYG5_9DINO)

HSP 1 Score: 195 bits (496), Expect = 2.080e-53
Identity = 100/171 (58.48%), Postives = 124/171 (72.51%), Query Frame = 2 
Query:    2 QELVDCD-SY-DMGCNGGLMDNSFHWIQQNHGICSEADYPYKAISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAP-QEGGECGILEQASYPIL 505
            Q+LVDC  SY +MGCNGGLMDN+F +I  N G+CSEADYPY A    C+ SSC   P   +  + D+  ++ +A+MAA+AQQPVSIAI+AD+M FQ YS GVLT SCG+ LDHGVL VGYG S++G  YW+VKNSWG  WGM GYILL R +     G+CG+L  ASYP +
Sbjct:   91 QQLVDCSGSYGNMGCNGGLMDNAFKYIIANGGLCSEADYPYTASDGTCKSSSCK--PAAAISGYYDIPSNNADAMMAAIAQQPVSIAIQADQMCFQFYSSGVLTCSCGSRLDHGVLAVGYG-SDNGQDYWRVKNSWGASWGMSGYILLGRGSNFGPAGQCGLLSVASYPTV 258
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A7R9U8K6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8K6_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.150e-53
Identity = 98/169 (57.99%), Postives = 117/169 (69.23%), Query Frame = 2 
Query:    2 QELVDCDSYDMGCNGGLMDNSFHWIQQNHGICSEADYPYKAISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILEQASYPILA 508
            Q LVDCD+ D GCNGGLMD +F + ++N G+CS   YPY    + C+ S C  VPGT VD W+DV   +E ALM+AV + PVS+AIEAD+ SFQLYS GV   +CG NLDHGV LVGYG +EDG  +WKVKNSWG  WG  GYI +SR+       CGI   ASYPILA
Sbjct:  165 QNLVDCDNVDQGCNGGLMDYAFEYAKENGGLCSLDSYPYIGFEETCESSKCTPVPGTAVDSWVDVQP-TESALMSAVTKTPVSVAIEADQRSFQLYSSGVFDGACGQNLDHGVTLVGYG-TEDGADFWKVKNSWGTSWGEEGYIRISRKENL----CGIQSSASYPILA 327
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A7S3LMX9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LMX9_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.870e-52
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 2 
Query:    2 QELVDCDSYDMGCNGGLMDNSFHWIQQNHGICSEADYPYKA---ISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILEQASYPI 502
            Q+LV CD  D GCNGGLMDN++ +I++N G+CSE DYPY A   +   C+KS C +VP +    + DV+H  E +L +AVA+QPV+IAIEAD+ +FQ YS GVL A CGTNLDHGVLLVGYG ++ G  YW VKNSWG  WG  GYI L+R   QEGGECG+L   SYPI
Sbjct:  308 QDLVSCDHVDQGCNGGLMDNAYKFIEKNGGLCSEDDYPYTAGHGMRGWCRKSKCKIVPNSKPASYSDVEH-KETSLESAVAKQPVAIAIEADQTAFQFYSKGVLNAKCGTNLDHGVLLVGYG-ADQGNDYWLVKNSWGPMWGDKGYIKLARGVSQEGGECGLLLSPSYPI 475
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BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Match: A0A482SGX9_9ARCH (Pept_C1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGX9_9ARCH)

HSP 1 Score: 191 bits (485), Expect = 5.090e-52
Identity = 98/178 (55.06%), Postives = 124/178 (69.66%), Query Frame = 2 
Query:    2 QELVDCDSY-----DMGCNGGLMDNSFHWIQQNHGICSEADYPYKA----ISDECQKSSCNVVPGTDVDKWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLDHGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGILE-QASYPIL 505
            Q LVDCD++     DMGCNGGLMD++F W+Q+N G+C+EA YPY +     +  C  S C+ V       + DV  +S+ A+M+A++QQPVSIAIEAD+ +FQLY  GV TA+CGT LDHGVL VGYG S DG+ Y+KVKNSWG  WGM GYILL+R   Q  G+CG+L    SYP L
Sbjct:   70 QNLVDCDNFKNGGTDMGCNGGLMDHAFKWVQKNGGLCTEASYPYTSGTTKAAGTCADSKCSKVGDVAPKSYTDVVKNSDSAMMSALSQQPVSIAIEADQSAFQLYKSGVFTAACGTKLDHGVLAVGYG-SLDGVDYYKVKNSWGSSWGMNGYILLARGISQAEGQCGMLSGPPSYPNL 246
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9360.21620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTR7_ECTSI3.570e-8882.84Cathepsin L-like proteinase n=2 Tax=Ectocarpus Tax... [more]
A0A835ZFS5_9STRA1.930e-7369.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XZA5_9STRA6.570e-6564.88Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6T5MXB9_HETAK8.710e-5860.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R5GUW4_9STRA2.090e-5761.05Cysteine proteinase n=1 Tax=Hondaea fermentalgiana... [more]
A0A7S2GCU1_9STRA8.110e-5558.48Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A813AYG5_9DINO2.080e-5358.48Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7R9U8K6_9STRA3.150e-5357.99Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3LMX9_9STRA4.870e-5258.82Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A482SGX9_9ARCH5.090e-5255.06Pept_C1 domain-containing protein n=1 Tax=archaeon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9360contigM-pyrifera_M_contig9360:1506..6496 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.3
Seed ortholog evalue8.7e-44
Seed eggNOG ortholog42099.EPrPV00000017722
KEGG koko:K01365
KEGG Pathwayko04140,ko04142,ko04145,ko04210,ko04612,ko05205,ko05323,ko05418,map04140,map04142,map04145,map04210,map04612,map05205,map05323,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0006508,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009057,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0010054,GO:0016020,GO:0016049,GO:0016787,GO:0019538,GO:0021700,GO:0022622,GO:0030154,GO:0030163,GO:0031224,GO:0031225,GO:0032501,GO:0032502,GO:0040007,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0048364,GO:0048468,GO:0048469,GO:0048588,GO:0048589,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0051603,GO:0060560,GO:0070011,GO:0071695,GO:0071704,GO:0080147,GO:0090558,GO:0090627,GO:0099402,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1905392
EggNOG free text desc.Cysteine protease family C01A. Source PGD
EggNOG OGs1MEDP@121069,COG4870@1,KOG1543@2759
EC3.4.22.15
COG Functional cat.O
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00537,ko01000,ko01002,ko03110
Exons5
Model size2382
Cds size480
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816848.8866258-UTR-M-pyrifera_M_contig9360:1505..33761622816848.8866258-UTR-M-pyrifera_M_contig9360:1505..3376Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9360 1506..3376 -
1692278214.311705-UTR-M-pyrifera_M_contig9360:1505..33761692278214.311705-UTR-M-pyrifera_M_contig9360:1505..3376Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9360 1506..3376 -
1622816848.959253-UTR-M-pyrifera_M_contig9360:6465..64961622816848.959253-UTR-M-pyrifera_M_contig9360:6465..6496Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9360 6466..6496 -
1692278214.3860435-UTR-M-pyrifera_M_contig9360:6465..64961692278214.3860435-UTR-M-pyrifera_M_contig9360:6465..6496Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9360 6466..6496 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816848.8974228-CDS-M-pyrifera_M_contig9360:3376..34991622816848.8974228-CDS-M-pyrifera_M_contig9360:3376..3499Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 3377..3499 -
1692278214.3256009-CDS-M-pyrifera_M_contig9360:3376..34991692278214.3256009-CDS-M-pyrifera_M_contig9360:3376..3499Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 3377..3499 -
1622816848.907709-CDS-M-pyrifera_M_contig9360:4335..44521622816848.907709-CDS-M-pyrifera_M_contig9360:4335..4452Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 4336..4452 -
1692278214.3380647-CDS-M-pyrifera_M_contig9360:4335..44521692278214.3380647-CDS-M-pyrifera_M_contig9360:4335..4452Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 4336..4452 -
1622816848.920192-CDS-M-pyrifera_M_contig9360:5276..53331622816848.920192-CDS-M-pyrifera_M_contig9360:5276..5333Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 5277..5333 -
1692278214.3526711-CDS-M-pyrifera_M_contig9360:5276..53331692278214.3526711-CDS-M-pyrifera_M_contig9360:5276..5333Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 5277..5333 -
1622816848.9349196-CDS-M-pyrifera_M_contig9360:5826..59341622816848.9349196-CDS-M-pyrifera_M_contig9360:5826..5934Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 5827..5934 -
1692278214.3637915-CDS-M-pyrifera_M_contig9360:5826..59341692278214.3637915-CDS-M-pyrifera_M_contig9360:5826..5934Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 5827..5934 -
1622816848.9461694-CDS-M-pyrifera_M_contig9360:6390..64651622816848.9461694-CDS-M-pyrifera_M_contig9360:6390..6465Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 6391..6465 -
1692278214.3748431-CDS-M-pyrifera_M_contig9360:6390..64651692278214.3748431-CDS-M-pyrifera_M_contig9360:6390..6465Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9360 6391..6465 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9360.21620.1prot_M-pyrifera_M_contig9360.21620.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9360 3377..6465 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9360.21620.1

>prot_M-pyrifera_M_contig9360.21620.1 ID=prot_M-pyrifera_M_contig9360.21620.1|Name=mRNA_M-pyrifera_M_contig9360.21620.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp
MGCNGGLMDNSFHWIQQNHGICSEADYPYKAISDECQKSSCNVVPGTDVD
KWIDVDHDSEEALMAAVAQQPVSIAIEADEMSFQLYSGGVLTASCGTNLD
HGVLLVGYGVSEDGIKYWKVKNSWGGDWGMGGYILLSREAPQEGGECGIL
EQASYPILA*
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mRNA from alignment at M-pyrifera_M_contig9360:1506..6496-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9360.21620.1 ID=mRNA_M-pyrifera_M_contig9360.21620.1|Name=mRNA_M-pyrifera_M_contig9360.21620.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4991bp|location=Sequence derived from alignment at M-pyrifera_M_contig9360:1506..6496- (Macrocystis pyrifera P11B4 male)
GCAGGAGCTGGTCGACTGCGATTCCTACGACATGGGTTGCAACGGTGGCC
TTATGGACAACTCGTTCCACTGGATCCAGCAAAACCACGGCATCTGCAGT
GAGGCGGTAAGCCAGCCACGTCACCACCACTTCCATGTTTTTTTTTTTAG
TCTTGATATTCCTTTGCCTCGGGTCGGTCGATGGATCCATCGATTGCTTA
GGCGGAAGAAGATAGAAAACGAAGAAAATCCCGGGATTGTGGCGCGTTGT
TTTGAATTCGATGGTACTATGTGGAGGCGTGATGGGTAGGCAGGGGATAG
GGGATGTGTGTGTGTGTGTTTTGAGTAGCACGGGTGAGGTTGTACTCATG
GGAGAAAACAAGAAAACGACGGGACGACGTTATCCCTACGGTGGGTTTCA
AAACTTGTGCAGAAGTGTAAATAAGCACTGCTGCTGAGAGTATAACTGTA
TATGTCCCAGGTATCATGAATGCACCATTCCATCGAGTGTGATCTTGATG
GCTTATCGACCTGGTCCTCTGTGCCCTCGATGTCGACGGACACGAATGCC
TCCATCCCGCAGGACTACCCCTACAAGGCCATCAGCGACGAGTGCCAGAA
GTCCTCTTGCAACGTTGTCCCAGGCACTGATGTGGACAAGTGGATCGATG
TCGACCACGACTCCGAAGAGGTGGGTTGTGTTTTATTAATAGCATCCTTG
CACTCACGGGACGGGTCATGGACGAACGAATTGCTGTAGATATTTCAGGG
AAAAAGACAGACTGATTGCGAGTAGTATATGGAAGGTGCCATAAGGTGGT
GACGGGTGGGAGCAGTAGGATTGATGTGCATGCGTATGACTACTGTAGCG
CTCTTCCGATACACTCTAAAAAGAAGTAATTTCCAACGTATTTTACACAC
ATGCTGTATACACGAGACGGTGTAAATTGTCCAAAGCCTTGTAAGAAAAC
ATCAAAATGTTTGATGGACTGGATAACGGCGTACGACCTGCACGTACCAG
TTTCTTTTTTCAGAATCGTGTCCTTGTGGCTTTCCCACCATGCCTCCTTT
TCCCCTCGGGGCTATCGGAGGGCTTGCCTCCGTCGAGCTTTTGTCATCCC
CTCCGTTCTTCTGATTTTGCTCGTCACTGTTTTGTCCCTCCAATCTTGTA
ATGTGCGGCGCAGGCGCTGATGGCGGCGGTCGCCCAGCAGCCGGTCTCGA
TCGCTATCGAGGCTGACGAGGTGAGGCGTTGCGAGTAATCATTTAAGGAG
TGTTGGATGTTGCTTTGTGTTTTTTTTAGTGCGTGCGATATATACGATGG
CCGTTGAATTGGTCATGTAGCCGTTGACCTCGTTGTAGCTCACGGTAGCC
GTTGAAGGTTATGGGTTATAGTCGTTGAAGGTTATAGTAGGCTGTGAAGG
ATTGTCGTATGTAGCCGTTGAAGATCACGGTAGCCGTCGATTGTCGTGGT
TACCGCGAAACGTTGTGGTAGCCGTTGGAGGTCGCGATATATACCCGTTG
AAGAGGATGGTCGCCTTTGAAGGTTATGATCACCGTGGAAGGGATGTCCA
TGGCGTTAGGGCAGATGTATAATAGATACTGCCTTAAAACATATTCAACT
ATCAACTGTTATTCCAAGCGACACCCCTGTTACCATCGCAGTATGTACTT
GCAGTACGAACTACAGCAGCACGTATTTTCGGGTAGTTTTTGCCAAAAAA
AAATGTGTGCTATTGTGAAGGGGTTGAGACTCTCGCTTTTTTTTGCCGAG
AGTGTGTTGCCCGCCCGTCGCGATTTCATTTTTACCTGAACGAGGGTTCA
AGTATTGTGAATTTTAGGTTTGTATGTCTTGGATGGCGGATGTGTCACGA
CCGTTGTCGTTTTGACCCTCTTTGTCACTGGACCTTCGTGAAGGGGACAA
GACACTTGGAATTAGAGTAGAGACATTTTTGGAGTTGGACGGGGTTAACC
TCGTTGAGTGCGGACAGGACACTCACGCCCGTCTCGCGTTTTGTGTTTGT
GGCGCTAAATCTCCTCACGCTCGCTCGCACTGCACCCTCGGCAGATGAGC
TTCCAGCTGTACTCGGGAGGTGTCTTGACGGCCAGCTGCGGAACCAACCT
CGACCACGGTGTTTTGCTGGTTGGGTACGGCGTTTCCGAGGACGGGATCA
AGTACTGGAAGGTGCGTACCTGTAGTACGTACTGGCTCAACTGTTTCATT
TCTCGGTATTTTTTCGTTCGCTGTACGATAAAACGGTGGAAAAGACACGC
ACTTGTCTTCCTTCACTCTTCGTCGGTAATGTAACACCCGTTTAGGCTCC
GATGTGAGTATCAAACAGTACTTATATTTTTGACCAGAGTGGAAATTTGT
TTGGTCACTCTCCTACCTTCCGTCCCGAAAGGTCTACGTAATCGATCTCT
TTGTTGAGATAAGTCAGGTGAAATTAGTGCCATATTTTGGTTTATGTAGA
GTTAGTATTACGGGTGACCATAGTTAATAGGACCTATGGTATACATAAAA
ACTTACCTAATGACCTGTTTTTACTAGTAATATTTGGTCCTATTTACTAT
GGTCCTCCGTAGTAGTGCACTTGTACTTAGTATACCTGGTACTAGCTAGT
ACCAGGGTAGTAGTTGAAAGGGTCAAGTGCCACGCGACGTTTTATTCCAG
GGCGTGCCGATTGTTCCACCCCACCATGTTGGATGGCGAGGCCTGTTCGT
CACAAGTCGAGTCCACGTGCTGCGTATATGTTTACAGTAGTATCCAAACA
TGCTTTGCGAATACTGCCGTGCACCCGGACTGTTGAACGCAAGTGATACA
GGGTTTACTTTTGTGGACGAAGATCACATCAACCGCCGACGTGAGGGTCA
ACTAGCTGAGGGTTTACTTTTTGTTTTCGAATCGACTCGGTGGAACCTGG
TATAACCTGGTATAGTAAACTCTATTTTTTTTAACACCTTTTTTTTGCGC
GAACCCTGCCCCCGCCTCCCCCCTCCCACTCCTTTCCGCCTGCCCAGGTG
AAGAACTCCTGGGGGGGGGATTGGGGCATGGGCGGGTACATCCTGCTCTC
GCGCGAAGCCCCCCAGGAGGGTGGAGAGTGCGGCATCCTCGAGCAGGCGT
CTTACCCCATCCTCGCCTAAGGAATATGGCACAGGGCCCGGATGGAACAC
GCCCCCTTATTCCCACTCATTTACGGCTAAATGCAGTACCACTATGTCCC
GAATTTTTGGAGGCGTTTTGATTGAAGATCAATATGTAAGCGATTCTTAT
ATTTTCGGCCGTAGTGGTATACATGCAGAGTACCACATCCGAAACGTGGT
TGCGGTTCTGACGGACTTATATATTGTAAAACCCTGTCATATGTCTGAAA
ATACTATTGCCAGTACTGATTCCAAGCAAAGTTTGTCTCGGAAAACGTGG
GTCCGGTTGGTTCTGAAGGAGGTTGGGTTTGGTACTCTATTGGTTCCGGA
GGGGTTTTTCACCCGTTCGCGGCTGGAAACAATGAAGGACACTGATTCCA
AGTAGTTTTGTCCCCCGAAACGCGGCTGTAGGTTGGTTCTGAAGGCGGTG
GTCAAACCTTTTGGTGCAAGCAGTCCCGTTTTGGGGACAAATCACTTGGA
ATTAGACTGGTTTGTGCCCGAATCGGGACTGCGATACTAAAGAGGTTTTA
AGTCGTCAAAAAGAATGGTGGTATGTGTTGAGGACGTGGACGAGCGGACA
TCCTAGGCGCTGCTCATGAGTGCCTCTCTGCCGTCCATGAGTGCCCCCAC
TCTTTTTTCATGGTGTGTTTTAGCGTACGTGCCGATATGCTTGGTCGTGT
GTGCCCCGGTATTGTGATGGGAGGCGTTTTCTTTCGTGTTGATTGCGGTG
GGAAGGAGAGGGGGTGGCGGTGGAGAATCGAGAAGGTGCTCATTTTGACC
GCTTTGATAGCGGACAGGATGGATTGTGGCACGGTGGGTTGTTCATGCGA
GCAACCTGCGGCACAGGATGGCGTATGGTTTTTGGTGTCATTTCATTTAT
CTTGGCGCTTCAGGAGAATCTGAAGGTTGGAGGAGGAAGCGGTATACAGG
GCACGGCGCGGCTTTTTTGCTTGGACGAACGGGATGCCATGAAGGCTACG
CTCTCTGTACAAATTTTGGATTGTGTAAATATACAAACACTGCGTACTGC
TCCTGGCGTGGCGGAGGGGGGGAGAGAGGTATACAGGAAAAGGATCCGTG
CGTACGCCCCGGCAGGAGGGGGGCGGCTGGAACAAATCATGTCCGTCATG
CCCCGGTCCTCTTAGCGATAGGGGAGTGCTTTTGGTGCTGGCTATTATTG
TTGTAGCACCATAATAATGATAGCTGTGCTCTACGATACAGCTCTTCGGC
AGTGCAGGCTGGGAGCCATATAGTTGACGCTCTGCTTTATTTTCTGCGGT
GAGCTATGAAAATGATATACTTCGAAGTATACGTACTGCTCTGTCGAGAG
ATAGAGCATTGCGTGAGTTTAGTGTGCTCGTCTAGTGTAACAATTTCACA
TCGGCGCACCATCTATCTTGCCGTGGGGTATACGGAGGGGACGCTTCACA
TCGTGTCTACATAGGAGGATCTTTTTGCGATTGAAGCCTAAGGGCGGCTA
TTTTTTTGTTTTTTTTTTCTTTCTCCTGTGAAGCAAATCAGTTGCTATTT
TTTTTTACCTTCCATGAAGCTTCAAGTAGTACGGACTTCTCTTCGTAGAG
TCTTGGCGTACATGGTGCGTCACGATCAACCGTTGAATGCGAACTCCGAA
GAGTGTTTTACTTTATGTCTGGTGTTTTTTGTGCATATTATATGAATGGT
GTGTGCTCGAGAACCAGTGCGCCGTACTACTGCATGTACATTGTGCTCGA
GGACTACAGTAGTAGTGCGCACCGTGCTGCCGCAGTGCTCGGAACAAAGC
CAAATAAATGCACAACACAACAACGCATGTAAATTTGCGGCAAGTATGGC
TGTGGCAAATGCAGCGAAGAATGAAACGCCTGAAGTTGGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9360:1506..6496-

>mRNA_M-pyrifera_M_contig9360.21620.1 ID=mRNA_M-pyrifera_M_contig9360.21620.1|Name=mRNA_M-pyrifera_M_contig9360.21620.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig9360:1506..6496- (Macrocystis pyrifera P11B4 male)
ATGGGTTGCAACGGTGGCCTTATGGACAACTCGTTCCACTGGATCCAGCA
AAACCACGGCATCTGCAGTGAGGCGATGGGTTGCAACGGTGGCCTTATGG
ACAACTCGTTCCACTGGATCCAGCAAAACCACGGCATCTGCAGTGAGGCG
GACTACCCCTACAAGGCCATCAGCGACGAGTGCCAGAAGTCCTCTTGCAA
CGTTGTCCCAGGCACTGATGTGGACAAGTGGATCGATGTCGACCACGACT
CCGAAGAGGACTACCCCTACAAGGCCATCAGCGACGAGTGCCAGAAGTCC
TCTTGCAACGTTGTCCCAGGCACTGATGTGGACAAGTGGATCGATGTCGA
CCACGACTCCGAAGAGGCGCTGATGGCGGCGGTCGCCCAGCAGCCGGTCT
CGATCGCTATCGAGGCTGACGAGGCGCTGATGGCGGCGGTCGCCCAGCAG
CCGGTCTCGATCGCTATCGAGGCTGACGAGATGAGCTTCCAGCTGTACTC
GGGAGGTGTCTTGACGGCCAGCTGCGGAACCAACCTCGACCACGGTGTTT
TGCTGGTTGGGTACGGCGTTTCCGAGGACGGGATCAAGTACTGGAAGATG
AGCTTCCAGCTGTACTCGGGAGGTGTCTTGACGGCCAGCTGCGGAACCAA
CCTCGACCACGGTGTTTTGCTGGTTGGGTACGGCGTTTCCGAGGACGGGA
TCAAGTACTGGAAGGTGAAGAACTCCTGGGGGGGGGATTGGGGCATGGGC
GGGTACATCCTGCTCTCGCGCGAAGCCCCCCAGGAGGGTGGAGAGTGCGG
CATCCTCGAGCAGGCGTCTTACCCCATCCTCGCCTAAGTGAAGAACTCCT
GGGGGGGGGATTGGGGCATGGGCGGGTACATCCTGCTCTCGCGCGAAGCC
CCCCAGGAGGGTGGAGAGTGCGGCATCCTCGAGCAGGCGTCTTACCCCAT
CCTCGCCTAA
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