mRNA_M-pyrifera_M_contig93573.21615.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93573.21615.1
Unique NamemRNA_M-pyrifera_M_contig93573.21615.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: A0A0D5M145_9GAMM (Proline racemase n=70 Tax=root TaxID=1 RepID=A0A0D5M145_9GAMM)

HSP 1 Score: 490 bits (1262), Expect = 1.820e-173
Identity = 239/250 (95.60%), Postives = 245/250 (98.00%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRD I VPG+G+VTYSIAYSGGFYALVDATELGFKL+RDEERALSECAYKIVEAIKA+RGFSHYTLGDVGPLPFLHFMGPEEQ+ EGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRL +GDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHIL D
Sbjct:   94 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDTINVPGIGDVTYSIAYSGGFYALVDATELGFKLTRDEERALSECAYKIVEAIKAKRGFSHYTLGDVGPLPFLHFMGPEEQVTEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLKIGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILSD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: A0A1R4HSL1_9GAMM (2-methylaconitate racemase n=7 Tax=Halomonas TaxID=2745 RepID=A0A1R4HSL1_9GAMM)

HSP 1 Score: 465 bits (1197), Expect = 1.540e-163
Identity = 224/250 (89.60%), Postives = 237/250 (94.80%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLE GIVPKQEGIQ F LEAPAGLV IEA+VHNGVVESVTC GLPSYIDTYRD IQVPG+G VTYS+AYSGGFYALVDA ELGFKL R+EE+ALS CA+KIVEA++AQRGFSHYTLGDVGPLPFLHFMGPEEQ+GEGY+RSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLN+GDKLETVSLRETGFIGTF GTHQEGAYQVVENTITGRSYVLA SDIVINCDDP+V+CGELHHIL D
Sbjct:   94 NTLCTATAVLECGIVPKQEGIQHFSLEAPAGLVHIEARVHNGVVESVTCEGLPSYIDTYRDTIQVPGIGTVTYSVAYSGGFYALVDAAELGFKLIREEEQALSACAHKIVEALQAQRGFSHYTLGDVGPLPFLHFMGPEEQVGEGYVRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNIGDKLETVSLRETGFIGTFTGTHQEGAYQVVENTITGRSYVLAQSDIVINCDDPLVSCGELHHILSD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: A0A0P8CNS1_9GAMM (Uncharacterized protein n=9 Tax=Halomonas TaxID=2745 RepID=A0A0P8CNS1_9GAMM)

HSP 1 Score: 455 bits (1171), Expect = 1.450e-159
Identity = 221/250 (88.40%), Postives = 234/250 (93.60%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQ+EA+VHNGVVESVTCGGLPSYIDTYR+ IQVP +G VTYSIAYSGGFYALVDA ELGFKL+ +EE AL+ CA+KIVEAIKA+RGFSHYTLGDVGPLPFLHFMGPEE +  GY+RSRSTTYVHPGVICRSTTGTGTSARLALM+YEGRLN GDKLETVSLR TGFIGTFI THQEGAYQVVENTITGRSYVLAHSDIVINCDDP+V CG LHHIL D
Sbjct:   94 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQVEARVHNGVVESVTCGGLPSYIDTYRETIQVPDIGPVTYSIAYSGGFYALVDAAELGFKLTLEEEPALALCAHKIVEAIKAERGFSHYTLGDVGPLPFLHFMGPEENVAAGYVRSRSTTYVHPGVICRSTTGTGTSARLALMHYEGRLNQGDKLETVSLRNTGFIGTFIDTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPLVRCGALHHILLD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: H0J4L3_9GAMM (Proline racemase n=16 Tax=Halomonas TaxID=2745 RepID=H0J4L3_9GAMM)

HSP 1 Score: 454 bits (1167), Expect = 4.590e-159
Identity = 222/250 (88.80%), Postives = 232/250 (92.80%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLE+GIVPKQEGIQRFKLEAPAGLVQ+EA V +GVVE VTC GLPSYIDTYRD IQVPG+G VTYSIAYSGGFYALVDA  LGFKL RDEE+AL+ CAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEE + EGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRL +GDKLETVSLRETGFIGTF GTHQEGAYQVVEN+ITGRSYVL  S IVINCDDP+VACGELHHIL D
Sbjct:   94 NTLCTATAVLETGIVPKQEGIQRFKLEAPAGLVQVEASVRDGVVEWVTCEGLPSYIDTYRDTIQVPGIGPVTYSIAYSGGFYALVDAEALGFKLVRDEEQALAACAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEPVAEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLTVGDKLETVSLRETGFIGTFTGTHQEGAYQVVENSITGRSYVLTESKIVINCDDPLVACGELHHILSD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: UPI001D0AA4C4 (proline racemase family protein n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0AA4C4)

HSP 1 Score: 450 bits (1157), Expect = 1.580e-157
Identity = 220/250 (88.00%), Postives = 229/250 (91.60%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLE G+VPKQEGIQRFKLEAPAGLVQIEA+VH+GVVESVTC GLPSYIDTYRD + VPG+GEVTYSIAYSGGFYALVDA  LGFKL+ DEE  LS CAYKIVEAIKA+RGFSHYTLGDVGPLPFLHFMGPEE +GEGY RSRS TYVHPGVICRSTTGTGTSARLALM YEGRL L DKLETVSLRETGFIGTF GTHQEGAYQVVENTITGRSYVLA S IVINC+DPMV CGELHHIL D
Sbjct:   94 NTLCTATAVLEMGLVPKQEGIQRFKLEAPAGLVQIEARVHDGVVESVTCEGLPSYIDTYRDSLMVPGVGEVTYSIAYSGGFYALVDAEALGFKLTLDEEAELSACAYKIVEAIKAKRGFSHYTLGDVGPLPFLHFMGPEEAVGEGYTRSRSATYVHPGVICRSTTGTGTSARLALMRYEGRLELNDKLETVSLRETGFIGTFTGTHQEGAYQVVENTITGRSYVLAESTIVINCEDPMVRCGELHHILSD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: A0A1U9RB98_9GAMM (Proline racemase n=4 Tax=Halomonas TaxID=2745 RepID=A0A1U9RB98_9GAMM)

HSP 1 Score: 441 bits (1135), Expect = 3.170e-154
Identity = 216/250 (86.40%), Postives = 230/250 (92.00%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLE+GIVPKQEGIQRFKLEAPAGLVQIEA V NGVVESVTC GLPSYIDT+RD I VPG+G VTYSIAYSGGFYALVDA  LGFKL R+EE AL+ CA+KIVEAI+AQRGFSHYTLGDVGPLPFLHFMGPEEQI +GY+RSRSTTYVHPGVICRSTTGTGTSARLALM+YEGRL +GDKLETVSLR TGFIGTF GTH+EGAYQV ENTITGRSYVLA S IVINCDDP+VACGELH +L D
Sbjct:   94 NTLCTATAVLETGIVPKQEGIQRFKLEAPAGLVQIEASVRNGVVESVTCEGLPSYIDTHRDTIDVPGIGPVTYSIAYSGGFYALVDAEALGFKLVREEELALAVCAHKIVEAIQAQRGFSHYTLGDVGPLPFLHFMGPEEQIAKGYVRSRSTTYVHPGVICRSTTGTGTSARLALMHYEGRLKVGDKLETVSLRNTGFIGTFTGTHKEGAYQVAENTITGRSYVLAESKIVINCDDPLVACGELHRLLSD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: A0A2M9TCD0_9GAMM (Proline racemase n=7 Tax=Halomonas TaxID=2745 RepID=A0A2M9TCD0_9GAMM)

HSP 1 Score: 441 bits (1135), Expect = 3.780e-154
Identity = 214/250 (85.60%), Postives = 230/250 (92.00%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLE GIVPKQEG+QRFKLEAPAGLVQIEA+V NGVVESVTC GLPSYID+YRD + VPG+G+VTYS+AYSGGFYALVDA  LGFKL RDEE AL+ CA+KI+EAI+A RGFSHYTLGDVGPLPFLHFMGPEE + +GY+RSRS TYVHPGVICRSTTGTGTSARLALM++EGRL  GDKLETVSLRETGFIGTF GTHQEGAYQVVENTITGRSYVLA S IVINCDDPMVACGELHHIL D
Sbjct:   94 NTLCTATAVLEMGIVPKQEGLQRFKLEAPAGLVQIEARVRNGVVESVTCEGLPSYIDSYRDTLLVPGIGDVTYSVAYSGGFYALVDAEALGFKLVRDEEAALAACAHKIIEAIQAHRGFSHYTLGDVGPLPFLHFMGPEEPVAQGYVRSRSATYVHPGVICRSTTGTGTSARLALMHHEGRLAPGDKLETVSLRETGFIGTFTGTHQEGAYQVVENTITGRSYVLADSTIVINCDDPMVACGELHHILSD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: A0A7Y3XAW2_9GAMM (Proline racemase n=2 Tax=Halomonas TaxID=2745 RepID=A0A7Y3XAW2_9GAMM)

HSP 1 Score: 434 bits (1116), Expect = 2.150e-151
Identity = 209/250 (83.60%), Postives = 230/250 (92.00%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLE+GIV K+EG+Q FKLEAPAGLV IEA V +GVVE +TC GLPSYIDTY   I VPG+G+VTYS+AYSGGFYALVDA +LGFKL R+EERAL+E AYKIVEAIKA+RGFSHYTLGDVGPLPFLHFMGPEEQ+ +GYIRSRSTTYVHPGVICRSTTGTGTSARLALMN+EGRLN+GDKLETVSLRETGFIGTF G HQ+G +QVVENTITGRSYVLA+S+IVINCDDPMV CG+LHHIL D
Sbjct:   94 NTLCTATAVLEAGIVEKREGVQHFKLEAPAGLVNIEATVKDGVVEPITCEGLPSYIDTYHASIHVPGIGDVTYSVAYSGGFYALVDAEQLGFKLVREEERALAESAYKIVEAIKAERGFSHYTLGDVGPLPFLHFMGPEEQVADGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNHEGRLNIGDKLETVSLRETGFIGTFTGRHQQGNFQVVENTITGRSYVLANSEIVINCDDPMVNCGKLHHILTD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: A0A7X4JWM3_9GAMM (Proline racemase n=2 Tax=Halomonas TaxID=2745 RepID=A0A7X4JWM3_9GAMM)

HSP 1 Score: 432 bits (1112), Expect = 1.190e-150
Identity = 212/250 (84.80%), Postives = 224/250 (89.60%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD 750
            NTLCTATAVLE GIV KQEG+Q FKLE+PAGLV I A V NGVVESVTC GLPSYIDTYR  I VPG+G VTYSIAYSGGFYALVDA  LGFKL R+EERAL++CAYKIVEAIKA+RGFSHYTLGDVGPLPFLHFMGPEE+I EGY+RSRSTTYVHPGVICRSTTGTGTSARLALM YEGRLN+GDKLETVSLRETGFIGTF  THQEG YQVVEN ITGRSYVLA S+IVINC DP+V CG LHHIL D
Sbjct:   94 NTLCTATAVLEHGIVKKQEGVQHFKLESPAGLVNITATVKNGVVESVTCEGLPSYIDTYRATINVPGIGNVTYSIAYSGGFYALVDAEALGFKLIREEERALADCAYKIVEAIKAERGFSHYTLGDVGPLPFLHFMGPEERIAEGYVRSRSTTYVHPGVICRSTTGTGTSARLALMQYEGRLNIGDKLETVSLRETGFIGTFTATHQEGEYQVVENNITGRSYVLATSNIVINCADPLVYCGNLHHILSD 343          
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Match: A0A1J0VC08_9GAMM (Proline racemase n=1 Tax=Halomonas aestuarii TaxID=1897729 RepID=A0A1J0VC08_9GAMM)

HSP 1 Score: 422 bits (1084), Expect = 1.890e-146
Identity = 199/248 (80.24%), Postives = 227/248 (91.53%), Query Frame = 1
Query:    1 NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCGGLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEERALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSRSTTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIGTFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHIL 744
            NT+CTATAVLESG+VPKQEG Q FKLE+PAGLVQIEA V NGVVE++TC GLPSYIDTYRD I VP LG+VTYS+AYSGGFYALVDA+ELGF L R+EERAL++CA++IVEAI+A+RGFSHYTLGDVGPLPFLHFMGP EQ+ +GY RSRSTTYVHPGVICRSTTGTGTSARLALM++EGR+  GD+LET+SLRETGFIG F G+HQEG ++VVENTITG+SYVLAHSDIV+NC+DPMV C  LHHIL
Sbjct:   94 NTICTATAVLESGLVPKQEGRQNFKLESPAGLVQIEALVENGVVEAITCAGLPSYIDTYRDSIHVPTLGDVTYSVAYSGGFYALVDASELGFSLVREEERALADCAHRIVEAIQAERGFSHYTLGDVGPLPFLHFMGPVEQVADGYYRSRSTTYVHPGVICRSTTGTGTSARLALMHHEGRIQPGDRLETISLRETGFIGEFTGSHQEGPHRVVENTITGKSYVLAHSDIVVNCEDPMVECAGLHHIL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93573.21615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D5M145_9GAMM1.820e-17395.60Proline racemase n=70 Tax=root TaxID=1 RepID=A0A0D... [more]
A0A1R4HSL1_9GAMM1.540e-16389.602-methylaconitate racemase n=7 Tax=Halomonas TaxID... [more]
A0A0P8CNS1_9GAMM1.450e-15988.40Uncharacterized protein n=9 Tax=Halomonas TaxID=27... [more]
H0J4L3_9GAMM4.590e-15988.80Proline racemase n=16 Tax=Halomonas TaxID=2745 Rep... [more]
UPI001D0AA4C41.580e-15788.00proline racemase family protein n=1 Tax=Halomonas ... [more]
A0A1U9RB98_9GAMM3.170e-15486.40Proline racemase n=4 Tax=Halomonas TaxID=2745 RepI... [more]
A0A2M9TCD0_9GAMM3.780e-15485.60Proline racemase n=7 Tax=Halomonas TaxID=2745 RepI... [more]
A0A7Y3XAW2_9GAMM2.150e-15183.60Proline racemase n=2 Tax=Halomonas TaxID=2745 RepI... [more]
A0A7X4JWM3_9GAMM1.190e-15084.80Proline racemase n=2 Tax=Halomonas TaxID=2745 RepI... [more]
A0A1J0VC08_9GAMM1.890e-14680.24Proline racemase n=1 Tax=Halomonas aestuarii TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93573contigM-pyrifera_M_contig93573:2..751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score501.5
Seed ortholog evalue2.2e-139
Seed eggNOG ortholog1380358.JADJ01000024_gene2275
KEGG rclassRC00479
KEGG koko:K01777
KEGG ReactionR01255
KEGG Pathwayko00330,ko01100,map00330,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the proline racemase family
EggNOG OGs1N02K@1224,1RYRX@1236,1XJ3C@135619,COG3938@1,COG3938@2
EC5.1.1.4
COG Functional cat.E
Best tax levelOceanospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size750
Cds size750
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816848.6362526-CDS-M-pyrifera_M_contig93573:1..7511622816848.6362526-CDS-M-pyrifera_M_contig93573:1..751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93573 2..751 -
1692278214.1467853-CDS-M-pyrifera_M_contig93573:1..7511692278214.1467853-CDS-M-pyrifera_M_contig93573:1..751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93573 2..751 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93573.21615.1prot_M-pyrifera_M_contig93573.21615.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93573 2..751 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93573.21615.1

>prot_M-pyrifera_M_contig93573.21615.1 ID=prot_M-pyrifera_M_contig93573.21615.1|Name=mRNA_M-pyrifera_M_contig93573.21615.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp
NTLCTATAVLESGIVPKQEGIQRFKLEAPAGLVQIEAKVHNGVVESVTCG
GLPSYIDTYRDKIQVPGLGEVTYSIAYSGGFYALVDATELGFKLSRDEER
ALSECAYKIVEAIKAQRGFSHYTLGDVGPLPFLHFMGPEEQIGEGYIRSR
STTYVHPGVICRSTTGTGTSARLALMNYEGRLNLGDKLETVSLRETGFIG
TFIGTHQEGAYQVVENTITGRSYVLAHSDIVINCDDPMVACGELHHILRD
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mRNA from alignment at M-pyrifera_M_contig93573:2..751-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93573.21615.1 ID=mRNA_M-pyrifera_M_contig93573.21615.1|Name=mRNA_M-pyrifera_M_contig93573.21615.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig93573:2..751- (Macrocystis pyrifera P11B4 male)
AACACGCTGTGTACTGCCACAGCGGTGCTTGAGAGCGGTATTGTTCCCAA GCAGGAAGGCATACAGCGATTTAAGTTGGAAGCGCCGGCGGGGTTAGTAC AGATCGAAGCGAAAGTGCATAACGGCGTAGTGGAATCGGTGACCTGTGGC GGCCTGCCCAGCTATATCGATACCTATCGCGACAAGATTCAGGTTCCTGG ACTGGGTGAGGTGACTTATTCCATCGCCTATAGCGGTGGCTTTTACGCTT TGGTCGACGCCACTGAGCTGGGCTTTAAGCTTTCCCGTGATGAGGAGCGT GCGCTTTCGGAGTGCGCCTACAAAATTGTCGAAGCGATAAAAGCGCAGCG GGGCTTTTCCCACTACACACTGGGCGATGTGGGGCCGCTGCCATTTTTGC ACTTTATGGGGCCTGAAGAGCAGATAGGGGAGGGCTATATACGTTCACGT TCAACGACGTACGTCCATCCTGGCGTTATTTGCCGCAGTACCACGGGCAC CGGTACTTCGGCGCGCTTGGCGCTGATGAACTATGAAGGACGGCTAAATC TGGGTGACAAGTTAGAGACGGTGTCACTGCGGGAGACCGGCTTTATTGGT ACCTTCATTGGCACCCATCAGGAAGGGGCTTACCAGGTAGTGGAAAACAC CATTACCGGCCGCAGCTATGTACTGGCCCACTCGGATATCGTTATTAACT GTGATGACCCGATGGTCGCATGTGGCGAGCTACACCATATCTTGCGTGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93573:2..751-

>mRNA_M-pyrifera_M_contig93573.21615.1 ID=mRNA_M-pyrifera_M_contig93573.21615.1|Name=mRNA_M-pyrifera_M_contig93573.21615.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig93573:2..751- (Macrocystis pyrifera P11B4 male)
AACACGCTGTGTACTGCCACAGCGGTGCTTGAGAGCGGTATTGTTCCCAA
GCAGGAAGGCATACAGCGATTTAAGTTGGAAGCGCCGGCGGGGTTAGTAC
AGATCGAAGCGAAAGTGCATAACGGCGTAGTGGAATCGGTGACCTGTGGC
GGCCTGCCCAGCTATATCGATACCTATCGCGACAAGATTCAGGTTCCTGG
ACTGGGTGAGGTGACTTATTCCATCGCCTATAGCGGTGGCTTTTACGCTT
TGGTCGACGCCACTGAGCTGGGCTTTAAGCTTTCCCGTGATGAGGAGCGT
GCGCTTTCGGAGTGCGCCTACAAAATTGTCGAAGCGATAAAAGCGCAGCG
GGGCTTTTCCCACTACACACTGGGCGATGTGGGGCCGCTGCCATTTTTGC
ACTTTATGGGGCCTGAAGAGCAGATAGGGGAGGGCTATATACGTTCACGT
TCAACGACGTACGTCCATCCTGGCGTTATTTGCCGCAGTACCACGGGCAC
CGGTACTTCGGCGCGCTTGGCGCTGATGAACTATGAAGGACGGCTAAATC
TGGGTGACAAGTTAGAGACGGTGTCACTGCGGGAGACCGGCTTTATTGGT
ACCTTCATTGGCACCCATCAGGAAGGGGCTTACCAGGTAGTGGAAAACAC
CATTACCGGCCGCAGCTATGTACTGGCCCACTCGGATATCGTTATTAACT
GTGATGACCCGATGGTCGCATGTGGCGAGCTACACCATATCTTGCGTGAC
AACACGCTGTGTACTGCCACAGCGGTGCTTGAGAGCGGTATTGTTCCCAA
GCAGGAAGGCATACAGCGATTTAAGTTGGAAGCGCCGGCGGGGTTAGTAC
AGATCGAAGCGAAAGTGCATAACGGCGTAGTGGAATCGGTGACCTGTGGC
GGCCTGCCCAGCTATATCGATACCTATCGCGACAAGATTCAGGTTCCTGG
ACTGGGTGAGGTGACTTATTCCATCGCCTATAGCGGTGGCTTTTACGCTT
TGGTCGACGCCACTGAGCTGGGCTTTAAGCTTTCCCGTGATGAGGAGCGT
GCGCTTTCGGAGTGCGCCTACAAAATTGTCGAAGCGATAAAAGCGCAGCG
GGGCTTTTCCCACTACACACTGGGCGATGTGGGGCCGCTGCCATTTTTGC
ACTTTATGGGGCCTGAAGAGCAGATAGGGGAGGGCTATATACGTTCACGT
TCAACGACGTACGTCCATCCTGGCGTTATTTGCCGCAGTACCACGGGCAC
CGGTACTTCGGCGCGCTTGGCGCTGATGAACTATGAAGGACGGCTAAATC
TGGGTGACAAGTTAGAGACGGTGTCACTGCGGGAGACCGGCTTTATTGGT
ACCTTCATTGGCACCCATCAGGAAGGGGCTTACCAGGTAGTGGAAAACAC
CATTACCGGCCGCAGCTATGTACTGGCCCACTCGGATATCGTTATTAACT
GTGATGACCCGATGGTCGCATGTGGCGAGCTACACCATATCTTGCGTGAC
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