mRNA_M-pyrifera_M_contig93535.21602.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93535.21602.1
Unique NamemRNA_M-pyrifera_M_contig93535.21602.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: A0A3M2G2Z8_ACTSX (Dihydroxy-acid dehydratase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G2Z8_ACTSX)

HSP 1 Score: 371 bits (952), Expect = 7.270e-123
Identity = 190/240 (79.17%), Postives = 210/240 (87.50%), Query Frame = 1
Query:    4 QLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVVAGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPLR 723
            + + AGPAGIPTQ AFSQS RWPSLDTDRE GCI SVEHAYT++GGLAVL GN+A DGCIVK AGV E  F FSGPARVYESQDDAVAGILGEEV AGE VIVRYEGPKGGPGMQEMLYPT+YIKSRGLG +CALLTDGRFSGGTSGLSIGH SPEAA GG IGLVETGD I+IDIP R I + +D++EL RRR A+E+RGA+AWTP +R+R VSQAL+AYAAMTT+AARGAVRD+  LR
Sbjct:  377 EFYRAGPAGIPTQQAFSQSERWPSLDTDRERGCIRSVEHAYTADGGLAVLYGNLAPDGCIVKTAGVDESIFRFSGPARVYESQDDAVAGILGEEVRAGEVVIVRYEGPKGGPGMQEMLYPTSYIKSRGLGRECALLTDGRFSGGTSGLSIGHVSPEAAEGGTIGLVETGDTIEIDIPARRIHLAVDEAELERRRAAQEARGAEAWTPVARDRRVSQALQAYAAMTTSAARGAVRDLRQLR 616          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: UPI001D0F827A (dihydroxy-acid dehydratase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0F827A)

HSP 1 Score: 370 bits (951), Expect = 1.190e-122
Identity = 187/240 (77.92%), Postives = 209/240 (87.08%), Query Frame = 1
Query:    1 KQLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVVAGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPL 720
            K+ + AGPAGIPTQVAFSQSTRW SLDTDR HGCI  VEHAY++EGGLAVL GN+A DGCIVK AGV EE + FSGPARVYESQDDAV GILGEEVVAG+ V++RYEGPKGGPGMQEMLYPTTY+KSRGLG +CALLTDGRFSGGTSGL IGHASPEAA GG IGLV TGD I+IDIPNRTI++ +DD+ELARR  AE  RGA AWTP  R+R VS AL+AYAA+TT+A+RGAVRDIS +
Sbjct:  376 KEFWRAGPAGIPTQVAFSQSTRWDSLDTDRAHGCIRDVEHAYSAEGGLAVLFGNLAPDGCIVKTAGVDEEIWTFSGPARVYESQDDAVEGILGEEVVAGDVVVIRYEGPKGGPGMQEMLYPTTYLKSRGLGKECALLTDGRFSGGTSGLCIGHASPEAAEGGLIGLVRTGDTIEIDIPNRTINLAVDDAELARRHAAELERGAAAWTPHDRDRQVSVALQAYAALTTSASRGAVRDISQI 615          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: A0A7Y2DL69_9ACTN (Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DL69_9ACTN)

HSP 1 Score: 363 bits (931), Expect = 7.130e-121
Identity = 184/238 (77.31%), Postives = 206/238 (86.55%), Query Frame = 1
Query:    1 KQLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVVAGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDIS 714
            K LFSAGPAGIPTQ AFSQ TRWPSLD DR  GCI  ++HAYTSEGGLAVL GN+A +GCIVK AGV E NF F+G ARVYESQDDAV GILGEEVV+GE V+VRYEGPKGGPGMQEMLYPTTYIKSRGLGT+CALLTDGRFSGGTSGLSIGHASPEAAAGG I LVETGD+I IDIPNR+I + +D++ L  RR AEE+RGA A+TP++RER VSQALRAYA+M T+A  GAVR ++
Sbjct:  288 KALFSAGPAGIPTQEAFSQDTRWPSLDLDRADGCIRDIDHAYTSEGGLAVLYGNLAENGCIVKTAGVDEGNFTFTGTARVYESQDDAVEGILGEEVVSGEVVVVRYEGPKGGPGMQEMLYPTTYIKSRGLGTECALLTDGRFSGGTSGLSIGHASPEAAAGGFIALVETGDVISIDIPNRSITLEVDEAVLTERRTAEEARGASAYTPKNRERQVSQALRAYASMVTSADTGAVRQLA 525          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: A0A7C1YYK5_9ACTN (Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YYK5_9ACTN)

HSP 1 Score: 365 bits (938), Expect = 9.590e-121
Identity = 188/241 (78.01%), Postives = 214/241 (88.80%), Query Frame = 1
Query:    1 KQLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILG-EEVVAGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPL 720
            ++++ AGPAGIP+Q AFSQ TRWPSLDTDR +GC+HSV++AYTSEGGLAVL GNIA DGCIVK AGV E  F FSGPARV+ESQ+ A+AG+L  E+V +G+ VIVRYEGPKGGPGMQEMLYPTTYIKSRGLG +CALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLV  GDIIDIDIPNRTI+VR+D +EL RRR AEE+RGA+AWTPR R+R VS+AL+AYA MTT+A RGAVRDIS L
Sbjct:  376 RRMYLAGPAGIPSQEAFSQDTRWPSLDTDRANGCVHSVDNAYTSEGGLAVLYGNIAEDGCIVKTAGVDESIFSFSGPARVFESQEAAMAGVLDPEQVNSGDVVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGAECALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVRDGDIIDIDIPNRTINVRLDRAELDRRRAAEEARGAEAWTPRDRDRQVSRALQAYALMTTSADRGAVRDISQL 616          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: UPI001A0B2086 (Dihydroxy-acid dehydratase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0B2086)

HSP 1 Score: 351 bits (901), Expect = 3.390e-119
Identity = 175/240 (72.92%), Postives = 203/240 (84.58%), Query Frame = 1
Query:    1 KQLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVVAGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPL 720
            K  F AGP  +PTQ AFSQ  RWP LD DRE+GCIHS+EHA+++EGGLAVL GNIA DGC+VK AGV E  F FSGPAR++ESQD AVAGILG+++ AG+ VI+RYEGP+GGPGMQEMLYPT+YIKS+GLG  CALLTDGRFSGGTSGLSIGHASPEAA GGAIGLVE GDII+IDIPNR+I V I D ELA RR A E++GA AW P +RER VS ALRAYAA+TT+A++GAVRD++ L
Sbjct:   79 KNFFLAGPGNVPTQTAFSQDKRWPDLDVDRENGCIHSIEHAFSTEGGLAVLYGNIAEDGCVVKTAGVDESIFKFSGPARIFESQDTAVAGILGDQIKAGDVVIIRYEGPRGGPGMQEMLYPTSYIKSKGLGKACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVEEGDIIEIDIPNRSIRVAISDQELAARRTAMEAKGAQAWKPVNRERQVSAALRAYAALTTSASKGAVRDVTQL 318          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: A0A6J6N6E6_9ZZZZ (Unannotated protein n=2 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6N6E6_9ZZZZ)

HSP 1 Score: 345 bits (884), Expect = 1.170e-115
Identity = 179/241 (74.27%), Postives = 201/241 (83.40%), Query Frame = 1
Query:    1 KQLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVVAGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPLR 723
            +  +SAGPAGIPTQVAFSQ TRWPSLD DRE+GCI SVEHAY++EGGLAVL GN+A DGCIVK AGV E  F F+G ARVYESQD AV GIL EEVVAGE VIVRYEGPKGGPGMQEMLYPTTYIKSRGLG +CALLTDGRFSGGT+GLSIGH SPEAA GG IGLV TGD I IDIP R+I + +  +ELA R   E +RG DAWTP +R+R VS AL+AYAAMTT+A+RGA+RD+  L+
Sbjct:  144 RHFWSAGPAGIPTQVAFSQDTRWPSLDDDRENGCIRSVEHAYSTEGGLAVLFGNLAADGCIVKTAGVDESIFKFTGTARVYESQDAAVEGILSEEVVAGEVVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGEKCALLTDGRFSGGTAGLSIGHVSPEAAEGGLIGLVRTGDSIIIDIPARSITLDVSPAELADRHAHEIARGDDAWTPTNRDRSVSLALQAYAAMTTSASRGAIRDLFQLQ 384          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: A0A6B1B187_9ACTN (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B187_9ACTN)

HSP 1 Score: 336 bits (862), Expect = 7.080e-114
Identity = 174/240 (72.50%), Postives = 198/240 (82.50%), Query Frame = 1
Query:    4 QLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVV-AGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPL 720
            + + AGPAGIPTQVAFSQ+ RWP+LD DR  GCI +V   YT EGGLAVL GNIA  GCIVK AGV E  F FSGPA V+ESQD A  GIL E V+ AG+ VIVRYEGPKGGPGMQEMLYPT+YIKSRGLG +CAL+TDGRFSGGTSGLSIGHASPE A GGAI L+ETGD+IDIDIPNR++++RI D+ELA RR A E++GADAW P  R+R VS ALRAYAAMTT+A RGAVRD+S +
Sbjct:   38 EFYRAGPAGIPTQVAFSQAERWPTLDLDRTDGCIRTVAEPYTREGGLAVLFGNIAERGCIVKTAGVDESIFKFSGPAVVFESQDSACEGILDESVIKAGDVVIVRYEGPKGGPGMQEMLYPTSYIKSRGLGKECALVTDGRFSGGTSGLSIGHASPEGAEGGAIALIETGDMIDIDIPNRSVNLRISDAELAERRRAMEAKGADAWRPLERQRTVSAALRAYAAMTTSADRGAVRDVSQI 277          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: A0A351EYB9_9ACTN (Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EYB9_9ACTN)

HSP 1 Score: 348 bits (892), Expect = 7.750e-114
Identity = 182/241 (75.52%), Postives = 203/241 (84.23%), Query Frame = 1
Query:    1 KQLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVV-AGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPL 720
            K+ F AGPAGIPTQVAFSQSTRW +LD DRE+GCI SVE+AY+++GGL VL GNIAVDGCIVK AGV E    FSGPARV+ESQD AV GIL E++V AG+ +IVRYEGPKGGPGMQEMLYPTTYIKSRGLG +CALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLV  GD I IDIPNRTI+V + D ELA RR  EE+ G +AW  R RER V+QAL AYAA+TT+A RGA+RDIS L
Sbjct:  376 KEFFRAGPAGIPTQVAFSQSTRWDTLDDDRENGCIRSVENAYSTDGGLGVLYGNIAVDGCIVKTAGVDESILTFSGPARVFESQDAAVEGILDEDMVNAGDVIIVRYEGPKGGPGMQEMLYPTTYIKSRGLGKECALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVRDGDTIMIDIPNRTINVDLSDEELAGRRAEEEAHGKEAWKARGRERSVTQALMAYAALTTSADRGAIRDISQL 616          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: A0A7Y2IGG1_9ACTN (Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IGG1_9ACTN)

HSP 1 Score: 346 bits (888), Expect = 2.770e-113
Identity = 180/237 (75.95%), Postives = 200/237 (84.39%), Query Frame = 1
Query:    1 KQLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVVAGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDI 711
            K+LFSAGPAGIPTQVAFSQSTRWPSLDTDR  GCI  +EHAY+SEGGLAVL GNIA  GCIVK AGV  EN+ FSG ARVYESQDDAV GILGEEV +G+ VIVRYEGPKGGPGMQEMLYPTTYIKSRGLG +CALLTDGRFSGGTSGLSIGH SPEAAAGGAI L+  GD + IDIP R+I++ + D+ELA RR AEE+RG  A+TP  R+R VS ALRAYA+M T+A  GAVR +
Sbjct:  376 KRLFSAGPAGIPTQVAFSQSTRWPSLDTDRADGCIRDLEHAYSSEGGLAVLYGNIAEKGCIVKTAGVDPENYHFSGTARVYESQDDAVEGILGEEVQSGDVVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGKECALLTDGRFSGGTSGLSIGHVSPEAAAGGAIALIRNGDTVKIDIPARSINLDVPDAELAERRSAEEARGDKAFTPIDRDRQVSLALRAYASMVTSADTGAVRQL 612          
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Match: UPI000E30CB39 (dihydroxy-acid dehydratase n=1 Tax=Euzebya tangerina TaxID=591198 RepID=UPI000E30CB39)

HSP 1 Score: 345 bits (886), Expect = 8.580e-113
Identity = 177/240 (73.75%), Postives = 202/240 (84.17%), Query Frame = 1
Query:    4 QLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAVLSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILG-EEVVAGECVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEESRGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPL 720
            + F AGPAGIPTQ AFSQSTRW SLDTDRE GCI SVEHAY+++GGLAVL GNIA DGCIVK AGV E   VFSG ARV+ESQDD + G+L  ++V AG+ V++RYEGPKGGPGMQEMLYPTTYIKSRGLG +CALLTDGRFSGGTSGLSIGHASPEAAAGGAI L+  GD IDI+IP R+I++ I D ELA+RR  E+ RG DAWTPR R+R VS AL+AYAA+TT+A RGAVRD+S L
Sbjct:  388 EFFRAGPAGIPTQQAFSQSTRWDSLDTDRESGCIRSVEHAYSADGGLAVLYGNIAEDGCIVKTAGVDESIHVFSGTARVFESQDDGMTGVLDPKQVNAGDVVVIRYEGPKGGPGMQEMLYPTTYIKSRGLGKECALLTDGRFSGGTSGLSIGHASPEAAAGGAIALIRDGDTIDINIPERSINLAISDEELAQRRAEEDERGEDAWTPRERDRTVSTALQAYAALTTSADRGAVRDLSQL 627          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93535.21602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M2G2Z8_ACTSX7.270e-12379.17Dihydroxy-acid dehydratase n=1 Tax=Actinomyces sp.... [more]
UPI001D0F827A1.190e-12277.92dihydroxy-acid dehydratase n=1 Tax=Aquihabitans sp... [more]
A0A7Y2DL69_9ACTN7.130e-12177.31Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiale... [more]
A0A7C1YYK5_9ACTN9.590e-12178.01Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiale... [more]
UPI001A0B20863.390e-11972.92Dihydroxy-acid dehydratase n=1 Tax=Proteobacteria ... [more]
A0A6J6N6E6_9ZZZZ1.170e-11574.27Unannotated protein n=2 Tax=freshwater metagenome ... [more]
A0A6B1B187_9ACTN7.080e-11472.50Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Acid... [more]
A0A351EYB9_9ACTN7.750e-11475.52Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiace... [more]
A0A7Y2IGG1_9ACTN2.770e-11375.95Dihydroxy-acid dehydratase n=1 Tax=Acidimicrobiale... [more]
UPI000E30CB398.580e-11373.75dihydroxy-acid dehydratase n=1 Tax=Euzebya tangeri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93535contigM-pyrifera_M_contig93535:25..750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score344.0
Seed ortholog evalue5.8e-92
Seed eggNOG ortholog555778.Hneap_1151
Preferred nameilvD
KEGG rclassRC00468,RC01714
KEGG koko:K01687
KEGG ReactionR01209,R04441,R05070
KEGG Pathwayko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00570
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the IlvD Edd family
EggNOG OGs1MUTQ@1224,1RMP2@1236,1WW0Q@135613,COG0129@1,COG0129@2
EC4.2.1.9
COG Functional cat.EG
BiGG ReactioniAF987.Gmet_1259
Best tax levelChromatiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size726
Cds size726
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816848.1232488-CDS-M-pyrifera_M_contig93535:24..7501622816848.1232488-CDS-M-pyrifera_M_contig93535:24..750Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93535 25..750 -
1692278213.8550262-CDS-M-pyrifera_M_contig93535:24..7501692278213.8550262-CDS-M-pyrifera_M_contig93535:24..750Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93535 25..750 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93535.21602.1prot_M-pyrifera_M_contig93535.21602.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93535 25..750 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93535.21602.1

>prot_M-pyrifera_M_contig93535.21602.1 ID=prot_M-pyrifera_M_contig93535.21602.1|Name=mRNA_M-pyrifera_M_contig93535.21602.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
KQLFSAGPAGIPTQVAFSQSTRWPSLDTDREHGCIHSVEHAYTSEGGLAV
LSGNIAVDGCIVKPAGVAEENFVFSGPARVYESQDDAVAGILGEEVVAGE
CVIVRYEGPKGGPGMQEMLYPTTYIKSRGLGTQCALLTDGRFSGGTSGLS
IGHASPEAAAGGAIGLVETGDIIDIDIPNRTIDVRIDDSELARRRVAEES
RGADAWTPRSRERVVSQALRAYAAMTTAAARGAVRDISPLR*
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mRNA from alignment at M-pyrifera_M_contig93535:25..750-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93535.21602.1 ID=mRNA_M-pyrifera_M_contig93535.21602.1|Name=mRNA_M-pyrifera_M_contig93535.21602.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig93535:25..750- (Macrocystis pyrifera P11B4 male)
AAGCAACTCTTCAGTGCCGGCCCGGCCGGGATCCCCACGCAGGTCGCCTT CAGCCAGTCGACCCGCTGGCCGTCGCTCGACACCGACCGTGAGCATGGCT GCATCCACTCGGTCGAACACGCCTACACCTCCGAAGGCGGCCTGGCCGTG CTTTCCGGCAACATCGCCGTCGACGGCTGCATCGTCAAGCCCGCAGGCGT CGCCGAGGAGAACTTCGTCTTCTCCGGCCCGGCACGCGTGTACGAAAGCC AAGACGACGCCGTCGCCGGCATCCTCGGCGAAGAAGTCGTCGCCGGTGAG TGCGTGATCGTTCGCTACGAGGGCCCCAAGGGCGGCCCGGGTATGCAGGA GATGCTCTACCCGACCACCTACATCAAGAGCCGTGGGCTCGGCACCCAGT GTGCGCTGCTCACCGACGGCCGTTTCTCCGGTGGCACCTCCGGGCTGTCG ATCGGTCACGCCTCACCCGAGGCCGCAGCGGGCGGAGCGATCGGCCTGGT CGAGACCGGCGACATCATCGACATCGACATCCCGAACCGCACCATCGACG TCCGGATCGACGACTCCGAACTCGCCCGCCGCCGGGTGGCCGAGGAATCA CGGGGGGCCGATGCCTGGACCCCTCGGAGCCGTGAACGGGTCGTGAGCCA GGCACTGCGGGCCTATGCCGCCATGACCACCGCGGCCGCTCGCGGAGCGG TGCGAGACATCAGCCCGCTGCGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93535:25..750-

>mRNA_M-pyrifera_M_contig93535.21602.1 ID=mRNA_M-pyrifera_M_contig93535.21602.1|Name=mRNA_M-pyrifera_M_contig93535.21602.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig93535:25..750- (Macrocystis pyrifera P11B4 male)
AAGCAACTCTTCAGTGCCGGCCCGGCCGGGATCCCCACGCAGGTCGCCTT
CAGCCAGTCGACCCGCTGGCCGTCGCTCGACACCGACCGTGAGCATGGCT
GCATCCACTCGGTCGAACACGCCTACACCTCCGAAGGCGGCCTGGCCGTG
CTTTCCGGCAACATCGCCGTCGACGGCTGCATCGTCAAGCCCGCAGGCGT
CGCCGAGGAGAACTTCGTCTTCTCCGGCCCGGCACGCGTGTACGAAAGCC
AAGACGACGCCGTCGCCGGCATCCTCGGCGAAGAAGTCGTCGCCGGTGAG
TGCGTGATCGTTCGCTACGAGGGCCCCAAGGGCGGCCCGGGTATGCAGGA
GATGCTCTACCCGACCACCTACATCAAGAGCCGTGGGCTCGGCACCCAGT
GTGCGCTGCTCACCGACGGCCGTTTCTCCGGTGGCACCTCCGGGCTGTCG
ATCGGTCACGCCTCACCCGAGGCCGCAGCGGGCGGAGCGATCGGCCTGGT
CGAGACCGGCGACATCATCGACATCGACATCCCGAACCGCACCATCGACG
TCCGGATCGACGACTCCGAACTCGCCCGCCGCCGGGTGGCCGAGGAATCA
CGGGGGGCCGATGCCTGGACCCCTCGGAGCCGTGAACGGGTCGTGAGCCA
GGCACTGCGGGCCTATGCCGCCATGACCACCGCGGCCGCTCGCGGAGCGG
TGCGAGACATCAGCCCGCTGCGCTGAAAGCAACTCTTCAGTGCCGGCCCG
GCCGGGATCCCCACGCAGGTCGCCTTCAGCCAGTCGACCCGCTGGCCGTC
GCTCGACACCGACCGTGAGCATGGCTGCATCCACTCGGTCGAACACGCCT
ACACCTCCGAAGGCGGCCTGGCCGTGCTTTCCGGCAACATCGCCGTCGAC
GGCTGCATCGTCAAGCCCGCAGGCGTCGCCGAGGAGAACTTCGTCTTCTC
CGGCCCGGCACGCGTGTACGAAAGCCAAGACGACGCCGTCGCCGGCATCC
TCGGCGAAGAAGTCGTCGCCGGTGAGTGCGTGATCGTTCGCTACGAGGGC
CCCAAGGGCGGCCCGGGTATGCAGGAGATGCTCTACCCGACCACCTACAT
CAAGAGCCGTGGGCTCGGCACCCAGTGTGCGCTGCTCACCGACGGCCGTT
TCTCCGGTGGCACCTCCGGGCTGTCGATCGGTCACGCCTCACCCGAGGCC
GCAGCGGGCGGAGCGATCGGCCTGGTCGAGACCGGCGACATCATCGACAT
CGACATCCCGAACCGCACCATCGACGTCCGGATCGACGACTCCGAACTCG
CCCGCCGCCGGGTGGCCGAGGAATCACGGGGGGCCGATGCCTGGACCCCT
CGGAGCCGTGAACGGGTCGTGAGCCAGGCACTGCGGGCCTATGCCGCCAT
GACCACCGCGGCCGCTCGCGGAGCGGTGCGAGACATCAGCCCGCTGCGCT
GA
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