mRNA_M-pyrifera_M_contig935.21597.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig935.21597.1
Unique NamemRNA_M-pyrifera_M_contig935.21597.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig935.21597.1 vs. uniprot
Match: D8LTK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK0_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 3.730e-120
Identity = 208/367 (56.68%), Postives = 244/367 (66.49%), Query Frame = 1 
Query:  289 MVGPSSVREEPQKSVRGPRGAVDVPTGAFSKPGVLGGLSVSPWVVQEEEERAQRAESHAAAISKDPVMFRRKREEGGLLDYAEETHAVKRFLDKIHPLKDESCPPKSGFSYRKVCHDTEPPDVYDTSLDSVRPRTVGFSPGHVRALSPTPPLTWGGRESSRASLEWREGTGGSLGTVKACLGGAKRGGNTHTLLSLTAHRIPLKDEKFSQSWTAEAFPASIELPRQQRWPSNQDAEKDRDTIEVRPMWSRQGLQTT---LGSFSFSSPVLRPYTSPHDHLGRPMSCGVLSRSTSGLKPQQFDTTQRRSEYTCALVTKREARLAKEAEEKLAAKVEEERSRNAAEGREGIEKFERSLKEVLAQKWKYL 1380
            M+ PS VR +P++SVRGPRG  ++  G F KPGVLGGL+VSPWVV+EE ERAQR  SH A IS +PV+FRRKREEGGLLDYAEE HAVKRFLDKIHP++DESCPPKSGFSY                                              ESSR S+EW EGTGGSLGTVKACL G  R G + T  S +   +P +  +F QSW  E F      PR       Q+A++D   IEVRPMWSRQGL+ T     S SF  P LRP++S  D LGRPMS  VLSRST+GLKPQQFDTTQRRSEYTCAL+ +REAR ++EA   +AA++E+ER +NA E REGI+KFE SLKE+LAQKWKYL
Sbjct:    1 MMEPSKVRTKPRRSVRGPRGVPNIEPGTFKKPGVLGGLNVSPWVVEEEVERAQRVLSHKATISTNPVVFRRKREEGGLLDYAEEMHAVKRFLDKIHPIRDESCPPKSGFSYS---------------------------------------------ESSRVSMEWGEGTGGSLGTVKACLRGTSRCGGSATRPSRSCP-LPSQRSRFGQSWETEDF-TDEGSPRNNN--QGQEADRDGSGIEVRPMWSRQGLRATRPGTTSSSFQGPALRPFSSSCDQLGRPMSREVLSRSTAGLKPQQFDTTQRRSEYTCALLGRREARQSREAGRVVAAQLEKERRKNATEEREGIDKFEGSLKEILAQKWKYL 318
[Close]
BLAST of mRNA_M-pyrifera_M_contig935.21597.1 vs. uniprot
Match: A0A6H5KWZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ1_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 8.860e-41
Identity = 82/121 (67.77%), Postives = 96/121 (79.34%), Query Frame = 1 
Query: 1027 MWSRQGLQTT---LGSFSFSSPVLRPYTSPHDHLGRPMSCGVLSRSTSGLKPQQFDTTQRRSEYTCALVTKREARLAKEAEEKLAAKVEEERSRNAAEGREGIEKFERSLKEVLAQKWKYL 1380
            MWSRQGL+ T     S SF  P LRP++S  D LGRPMS  VLSRST+GLKPQQFDTTQRRSEYTCAL+ +REAR ++EA   +A ++E+ER +NA E REGIEKFE SLKE+LAQKWKYL
Sbjct:    1 MWSRQGLRATRPGTTSSSFQGPALRPFSSSRDQLGRPMSRAVLSRSTAGLKPQQFDTTQRRSEYTCALLGRREARRSREAGRIVAEQLEKERRKNATEEREGIEKFEGSLKEILAQKWKYL 121
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig935.21597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTK0_ECTSI3.730e-12056.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWZ1_9PHAE8.860e-4167.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig935contigM-pyrifera_M_contig935:3201..10173 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_005890.1
Exons7
Model size1383
Cds size1383
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816847.7789176-CDS-M-pyrifera_M_contig935:3200..33021622816847.7789176-CDS-M-pyrifera_M_contig935:3200..3302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 3201..3302 -
1692278213.6088116-CDS-M-pyrifera_M_contig935:3200..33021692278213.6088116-CDS-M-pyrifera_M_contig935:3200..3302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 3201..3302 -
1622816847.7916691-CDS-M-pyrifera_M_contig935:4389..46531622816847.7916691-CDS-M-pyrifera_M_contig935:4389..4653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 4390..4653 -
1692278213.6204448-CDS-M-pyrifera_M_contig935:4389..46531692278213.6204448-CDS-M-pyrifera_M_contig935:4389..4653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 4390..4653 -
1622816847.8041632-CDS-M-pyrifera_M_contig935:5892..60541622816847.8041632-CDS-M-pyrifera_M_contig935:5892..6054Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 5893..6054 -
1692278213.632326-CDS-M-pyrifera_M_contig935:5892..60541692278213.632326-CDS-M-pyrifera_M_contig935:5892..6054Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 5893..6054 -
1622816847.818474-CDS-M-pyrifera_M_contig935:6532..67641622816847.818474-CDS-M-pyrifera_M_contig935:6532..6764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 6533..6764 -
1692278213.6464143-CDS-M-pyrifera_M_contig935:6532..67641692278213.6464143-CDS-M-pyrifera_M_contig935:6532..6764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 6533..6764 -
1622816847.83585-CDS-M-pyrifera_M_contig935:7049..71921622816847.83585-CDS-M-pyrifera_M_contig935:7049..7192Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 7050..7192 -
1692278213.6580873-CDS-M-pyrifera_M_contig935:7049..71921692278213.6580873-CDS-M-pyrifera_M_contig935:7049..7192Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 7050..7192 -
1622816847.8512223-CDS-M-pyrifera_M_contig935:7943..82731622816847.8512223-CDS-M-pyrifera_M_contig935:7943..8273Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 7944..8273 -
1692278213.6665568-CDS-M-pyrifera_M_contig935:7943..82731692278213.6665568-CDS-M-pyrifera_M_contig935:7943..8273Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 7944..8273 -
1622816847.8639903-CDS-M-pyrifera_M_contig935:10023..101731622816847.8639903-CDS-M-pyrifera_M_contig935:10023..10173Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 10024..10173 -
1692278213.675791-CDS-M-pyrifera_M_contig935:10023..101731692278213.675791-CDS-M-pyrifera_M_contig935:10023..10173Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig935 10024..10173 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig935.21597.1prot_M-pyrifera_M_contig935.21597.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig935 3201..10173 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig935.21597.1

>prot_M-pyrifera_M_contig935.21597.1 ID=prot_M-pyrifera_M_contig935.21597.1|Name=mRNA_M-pyrifera_M_contig935.21597.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=461bp
RSGSGSTSSTSSSKMSWTRNDEGSEPTELNPSLLSSAISSGMPTFLLTKG
VPIIDRRKKRFVSARALARTQRKKVPPQSLDYPPDRPLCLRGHTPSMVGP
SSVREEPQKSVRGPRGAVDVPTGAFSKPGVLGGLSVSPWVVQEEEERAQR
AESHAAAISKDPVMFRRKREEGGLLDYAEETHAVKRFLDKIHPLKDESCP
PKSGFSYRKVCHDTEPPDVYDTSLDSVRPRTVGFSPGHVRALSPTPPLTW
GGRESSRASLEWREGTGGSLGTVKACLGGAKRGGNTHTLLSLTAHRIPLK
DEKFSQSWTAEAFPASIELPRQQRWPSNQDAEKDRDTIEVRPMWSRQGLQ
TTLGSFSFSSPVLRPYTSPHDHLGRPMSCGVLSRSTSGLKPQQFDTTQRR
SEYTCALVTKREARLAKEAEEKLAAKVEEERSRNAAEGREGIEKFERSLK
EVLAQKWKYL*
back to top

mRNA from alignment at M-pyrifera_M_contig935:3201..10173-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig935.21597.1 ID=mRNA_M-pyrifera_M_contig935.21597.1|Name=mRNA_M-pyrifera_M_contig935.21597.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6973bp|location=Sequence derived from alignment at M-pyrifera_M_contig935:3201..10173- (Macrocystis pyrifera P11B4 male)
AGGAGTGGCAGCGGCAGCACCAGCAGCACCAGCAGCAGCAAGATGAGCTG
GACAAGAAACGATGAGGGTTCAGAGCCTACCGAGTTGAACCCGAGTTTGT
TGAGTAGCGCTATCAGCTCGGGGATGCCGACATTTCTGCTTACCAAAGGG
GTGAGAGGGCGATCCAGGGGGGGGTCGAAGGGGCTCGGTTGGTGCGGTCT
TACGGCACAACGCAGAGAAGAATCGTCTGTTGTCGTAATTGAGCCGCACT
TTGCAGCTTCAACTGTAATTGCGCCGCATATTTCCTGTATCGCAGACTCG
ACAATCGACGACGCGTTCAGCATGATATGCCGAAACATCGCGAACGTTCA
GCAGCACGCGCATCAGTACCCGTGCTTCTCGCCACATGTGCGTGTATATG
TGTTGCTTCGTAATTTGTGGTGCATGATGGATACCTTGAGCTCATCCGCC
ATTCGCATAGTTCGTACGTTCAACTCCGGACATAGACCGCCCAGTGATGA
GCGCATTCATGGTCAAATATCAAACATCAAGTAAAAGTAAAAGGAACACA
GGGACAGCGATACCTTGCGTCTGTTACATTATCCTTATTTCCTAACGGCC
TCATTTTCCCCCGGCGGTCAAGCGGCGTGACACGTCTACGCATATATGAC
ACGGTGCTACAAGCAGCATCAAACATAGCTCGCAGCACGATCAGCGTCAG
GCAATCAACGACCCCTTTTGGGACCCAGAAAAAAAAAAACTTTATTTTTG
ATTTTGTCTCACCAAACGTCTACTGCTGTACCATTACAGCAGTACTACTG
TGAAGGTGTTACCTACTGAGCTAGCTGTACGAAGGGGTAAAATATCGATC
AATTACCCAGCCCAGGGTAATCCTTGTAACGCTCCCCCCTCCCCTCTGAA
CGGCGGGGTCTTTGGGGCGTCGGTACCGCATACGGCCATACGCTGACCTA
CCCGCTTCGTTTCAATACCTGGGGAACCAGGGAGATGTGTTTTTTTGGGA
CGCGCGCGCAAGCGCTTCTATAAAAGAAAACGTTCGAAGTGAGATTCGAA
CCTGTGTCCTGCCGTCGACGCAAAATGTGAAGATGTTACCGACTGAGCCA
CAGGGGCGAAATATCGATCTATTACCCAGCCTATGGTAATCCTTATAACC
GTACAACTCTGACCGGAAACATGACCTCCACTTAATATTCATATCACGAC
TGAACGGATATTATATTCCCGGTCAGAGTGGTACAGCAGTATGGGCCCGT
GGACAAGAAACACCTGCTGCTGTATGCAATGTGAGCAAGTCTCTAAGGCA
TACTGTGACACGATGCTTGAACAACCTTGAGCATACTGATATAAACCACT
CTGGGGGCAAATATAAAGACCGCTTGGTCCTCATATTTATGTCTAAACGG
TCTTATATTTCCACCCACAGCGGTATGATTTAGTTTACCGCTCGTCGCTG
CTTTCTTACGAGTAGTCAAAATTTCTTATCGTCCCACCAGAAGTGAGCCT
TTCGTTCTTATTGTGCTCTTTCTTGTTCATCGGCCTATACTGTAGCAGAA
GTACAAGTAGGGTGACGCTGTCGTACGGCTCCTTGCACTGCTAAGCACAA
AAAGGTATAATTCCCCTACCAAGCGGTGGCCGATGCTGTATATTCGTCAT
TTTTAGTACGCCAGACGTAGTCGTTTTATTCCTCTGGATTACCTGGTACA
CCTATTTCCATCCTTCCTCGACACCAACGTCAACAAAACAGCAGCAACAG
TAATAACAGCAGCAACAACAACAACAACAACAACAACAGCAGCAGCAGCA
ACAACAACAACAGCAACAACAACAACAACAACAGCAACAGCAACAGCAAC
AGCAACAGCAACAGCAACAGCAACAACGACAACAACCGCACAAACGGCAG
GTCCCGATCATCGACCGCCGAAAGAAGAGGTTCGTCTCGGCACGAGCCCT
CGCCCGAACCCAAAGGAAGAAGGTACCCCCTCAAAGTCTTGACTACCCCC
CGGACAGACCTCTGTGCCTCCGTGGACACACACCTTCGATGGTCGGGCCT
TCGAGCGTGAGAGAGGAGCCGCAGAAGTCGGTGAGGGGGCCGCGAGGGGC
AGTGGATGTTCCCACTGGGGCCTTTTCGAAGCCCGGCGTGCTTGGAGGGC
TGAGTGTCAGCCCCTGGGTGGTCCAGGAGGAAGAGGAGCGAGCGCAACGT
GCGGAGTCGCACGCGGCCGCCATTTCGAAGGTTAGAGAGTGTGTATGTGT
TTTTTCGGCGGTTTTGATCGTGCGTTGTAGGGGACGCGTCCTAAGCGCAA
CATTAGGATCTACCACGATGTCCCGAGGCATTAGGTATTAATATGAAAAC
GGTCATTATACTGTGGGATCGAGTGGTGTACGGCACGCGCACAACACGCT
GATATTCGTACTGCCCAGGACCTTTCCTAGACGGTTGATATGAGCGCACT
GCTCATGGGTTTTTGGTCGATACACATCGGTGCCAGGGTAATGGTGCTCC
ACTCCAAGCTGTGACGTCCGTCGTTTTATTTCATTTTATATTACGGCCCC
TTTTCTCGAAACGTTGGCAAGACCCCGATACGTTCATCCGACTGTCAGGT
ATTTACGGCACCGTATAGAATGTTTCGATTTATTGAAATATCAAACTTTC
GATATATCGTATCGAAGGTGTTTTTGCCCCCATTCCCTGAAACCCTGTGT
TTTGTAGACTAACACGTCACCGAAACGAAATGCTTCGACGAATCGTCATC
AACTATCGAAACCGTGTGTGTCGATTTTGTTTTTGGTTCCTCGGTATCGT
ATGTATATCGCCCTCGATTATCGTTCGGTATTATCGAGTTCGTGTCGATT
TGATTTTTTGTTTGTCGGTACCGTATACTGGTGTATCGCATTCCATGCCC
GTTCGATATCCACCATTCTTGTTTTCCCTCGAAATGGTAACTCCCTGACA
ACACTCCGAAACGGTTACTGTTGTTGGAAAGGACCCCGTGATGTTCCGGC
GAAAGCGAGAGGAAGGCGGGCTGTTGGATTACGCCGAGGAGACCCATGCC
GTGAAGCGTTTTCTCGACAAGATACACCCGTTGAAGGACGAGTCATGCCC
GCCCAAGTCAGGCTTTAGCTACAGGTGAGGATTGTCTGTCGACATATCGA
AACATCATGATGTCCTATGCCAGGAACACAATACGCCGCAGAACAAAAAC
TCTACGGGTACGCGCGAGAATATTCACCTCCCTCGTCGAATGAACGTTAA
CAAACGGTTTCAATATACGTGGCTACGATCGTTCCTGTATGTTTTTTGCT
CCTGAGCCAACGTTTTCAACCAATGAGAAGCCGATCCCCGATACACCACT
CGATCGACCGCAAGAACGCAACCACTTTCTACTGCGCGGCCTTTTTTCGG
CGCCACCAGAAAGGTCTGCCATGACACCGAGCCCCCAGACGTCTACGACA
CGAGCCTGGACTCCGTCCGTCCCCGGACGGTAGGCTTTTCACCGGGGCAC
GTTCGAGCCTTGTCACCTACTCCCCCGCTGACGTGGGGGGGGAGGGAGAG
CTCGAGGGCCAGCTTGGAGTGGAGGGAGGGAACCGGCGGATCTTTGGGCA
CCGTAAAGGCTTGCTTAGGAGGCGCAAAGAGGGGTGGAAACGTGGAGGGC
CATCCTTCGTCCCTGGTGAGAGACGGAAGGGTTGCGTGGCGGAGATGAAG
TTTATGGCGAGCATTTTGGATTCTGTGTGTGCGAGCGAAAGGATCAACGA
CATCGCGATTCGCGCGCTCGAGTGGACATCCGTGTTGCGTGCTCCTGTGT
GGTGTTGTGTGTGTTCACGTTTTCGTGCCGGATGTTCCTACACAAGAACG
AAGCTTGCAGAGTGGTACAGAAATACTACCCTGTACTTTCTTTAAACGCC
GTCGAAACAGTTTCTGCGTGAAACCGTAAAAATCCTGGACATGCTCCGTC
GTGGCTGGTTATTAATTCTGCCGAGCTACGGGCGGGTGGTCCGACAAGAA
CCCTGCCCGGTTTGTGATGTTTTGTTCCTCCAGCACTTTTGGTTAAGTAC
CTTCCAGCATTCCACCCCGTCCCGACTCGGAATAACCGTGCCCCCAAATA
AACCATGGCGCATGAAAAGACGCATACACTCCTCTCTCTAACCGCTCATC
GCATTCCTTTGAAGGACGAAAAATTCAGCCAGTCTTGGACGGCCGAAGCG
TTTCCTGCTAGTATCGAACTTCCACGGCAGCAGCGATGGCCGAGTAACCA
AGACGCAGAAAAAGACCGTGACACCATAGAGGTAAGGGGTTCGACGTTGT
ATATATTGATAGGTGAGGGTTTTGATTATATGTGGGTTGAAGGGTATGGG
TGTCTCATGGGGGGTAAGGGTTTCGACAGTATGATAATTGGGAGGTGAGG
TTTTGTACATTGAGTGGATTACGCGGGCCATCTCGATGGTTTTCGGTTGG
GTCTAGTAGCGCGTACTGTAGATGGATATAGGGTGTTTCCTTGCAGGTGA
AGTGAGGCATTGATTGCCTTTTTTGCGCTTGAGGCTTAAGCACTCTGTTG
CGCCCACACGACATGTGACATCATGGCTGCTGCTTTGGGCATCGAACACA
CCCGCTCGGTTCATTCCCCAGTTGTTTTTTGTTCAATCAAGCTCTGTTTT
GATGTAGCGCCTTTGGATACCCTGAGCCGAGGTCACACGTTAGGCCTCCC
CTCTCGCCTGGCCTACCCGGGTGCCTGCCTTCAGTGTTTTGTGTTGCATT
GGGTTCATGGTTATCAATGCAAGTATTTCTCCGAGCGATTCATTTATCGA
CGTGGGTCGCAGTCTTCGACTGGTGCGCGACGTGTACGTTGTGTAGAAGC
AAACCATGTGTTGAGGTAAACCAGATTCTAATATACCAAGAACTGAACAA
AATCTACGCAGATTTCCTTCCGCCGAGAATCCAACACCAAGTACTCCCTT
CTATCAAGGATCGAACTCATCAGGACCACACCACTCAAGAGGGTAAGCGG
CTACCTCCACAATGTCAGGGCGAGCGACCGATAGTAGCGCGTTGCCATAA
GTCCCAGACCTACTGTAACCTCCAGATGAAGGTTCCGTACTATTACGGGG
GATCGTAGTAAATACGACCTAATATTGTTAGTAAAAACAGTTAAATATAT
ACCAGGTAGTTTTGTTGTGTGTACCGTAGGCCCTATTTACTATGTTCCTC
CGCAATAATTATGAATCAAATGTTACTATGATGTACGAGCTAATGAATCG
CAAGACGCGTGCGGTTTTATGCACTCGACCCCCCTCTCTCCCAGCCCCCC
CTAACCCCAGCCCGCCCCTCCTTCTCCAACCATCCTTCCGCCCCCCCTAC
ACCCCCCCTCCTCCACCCACCCCCCCATTCCCCATTCCACCCCCTCCTTC
ACCTCCCCCGCCCCCCTCGCCTGCCCTTCCCCCCAAGCCCTCGCATTTTT
ACTATTTTCTCACCTATCACAACTCGTGTCGTTTCCTCTACATGGTGAAC
TTATTTTTCTCCATCGCCAGGTACGACCGATGTGGAGCCGCCAAGGTTTG
CAAACGACGCTGGGATCGTTTTCCTTCAGCTCTCCTGTGCTGCGCCCCTA
CACCTCCCCGCACGACCACCTTGGAAGGCCGATGTCCTGCGGGGTTCTGT
CCCGGTCCACCTCTGGCCTCAAGCCGCAGCAGTTCGACACCACGCAGCGG
CGATCTGAGTACACGTGCGCCCTCGTGACCAAGCGGGAGGCGCGACTGGC
GAAGGAGGCGGAGGAGAAGTTGGCGGCTAAAGTTGTGAGGGCGGGCGTGG
GTTTGGCGTCTTTTTTCGTTTTTAGTGTTATTTTCCCCGTCGGGAACGGA
GTGGGGGGTGGAGGTGGGTTTCTGGCCAGAAGACGTCGCGCGGGAAGAGC
AAAAGGAAGGCCATAGCCTATTAAACCCTAGCCCGCGTTAGCTGGAGAGC
AGGAGCACCCCGGAAAATTTATGAAGCGTATCAATCACATCACCTATATT
CATGTGACAACTGTGAAATCAATATGTTGATGTCATTCTGCTGTCGAGAC
TCCGCTGACTACCTGTTTTTGGCGATACCTCTCAAGTACCAAGGGCGAGG
TTGCCGACATCCCAAAACTCAGCGGTCTTGGTCCTTACTTGAAGAAAATC
GACTTGTCGGCGACAAAGGGTTACCCCGCCTCGCTGCGCTAGGCTATGTT
CTTCCTTGAAACGGCGAACAAAACGGTTGATAGGACAGCGCTGCTCGCGC
TCAGTCGTTGTGACGCGGGCAAGCTCAGAGGAACCAGGCCTCGCTCGGCG
CGCACAAAAACATGATTTCGACATGCATGGTGGTATTTTCTGGTCGCTCG
AAGTCGTCTGCCGATAACGCGCGATACTATAGGGGCGTCATAAGTTACAG
TTACGTACTACAGTCTACAGTAACTGCTCAAAACACGTAACACCAAGAAC
TATCATCAAGAGAAGTCGGGAGATTCTCTTCCTTACTTCCCATGTGCTTG
CCTACTCCACTCGTTCACCATCGCAGTGGTCGCCGAGGAAGAGTTACTCT
AGAGCTTCTTCTCTTCGGGGTTGTTTCCTGGCGGCGAACGTTATGATCAC
CCCCCCTCAAACAAAAACAACAAAGGCGTCAAATCCGGCACGCCGCCTTT
GGCTTAAACCGCTTCTTACGTAGAAATTCTGCATCACAGCTCTACATGCT
ACCAGCTCGATTTTAATGCAAACCGTAGCCTTGCCATCCTCGTCCATTTT
AGCGGACCGCTACACGTACTCTACAGGAGATTTACTCTGTGAATGGTCTC
AAGCCGTGATACTGTAATAATTGTTTGTTTCCGTGGGCTGTCACCGCATA
CTATTTTGTTTTCTCTGGCAGGAGGAGGAGAGAAGCCGGAACGCCGCCGA
AGGCAGAGAAGGCATCGAAAAGTTCGAGAGGAGCCTAAAGGAGGTCTTGG
CGCAGAAGTGGAAGTACCTCTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig935:3201..10173-

>mRNA_M-pyrifera_M_contig935.21597.1 ID=mRNA_M-pyrifera_M_contig935.21597.1|Name=mRNA_M-pyrifera_M_contig935.21597.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2766bp|location=Sequence derived from alignment at M-pyrifera_M_contig935:3201..10173- (Macrocystis pyrifera P11B4 male)
AGGAGTGGCAGCGGCAGCACCAGCAGCACCAGCAGCAGCAAGATGAGCTG
GACAAGAAACGATGAGGGTTCAGAGCCTACCGAGTTGAACCCGAGTTTGT
TGAGTAGCGCTATCAGCTCGGGGATGCCGACATTTCTGCTTACCAAAGGG
AGGAGTGGCAGCGGCAGCACCAGCAGCACCAGCAGCAGCAAGATGAGCTG
GACAAGAAACGATGAGGGTTCAGAGCCTACCGAGTTGAACCCGAGTTTGT
TGAGTAGCGCTATCAGCTCGGGGATGCCGACATTTCTGCTTACCAAAGGG
GTCCCGATCATCGACCGCCGAAAGAAGAGGTTCGTCTCGGCACGAGCCCT
CGCCCGAACCCAAAGGAAGAAGGTACCCCCTCAAAGTCTTGACTACCCCC
CGGACAGACCTCTGTGCCTCCGTGGACACACACCTTCGATGGTCGGGCCT
TCGAGCGTGAGAGAGGAGCCGCAGAAGTCGGTGAGGGGGCCGCGAGGGGC
AGTGGATGTTCCCACTGGGGCCTTTTCGAAGCCCGGCGTGCTTGGAGGGC
TGAGTGTCAGCCCCTGGGTGGTCCAGGAGGAAGAGGAGCGAGCGCAACGT
GCGGAGTCGCACGCGGCCGCCATTTCGAAGGTCCCGATCATCGACCGCCG
AAAGAAGAGGTTCGTCTCGGCACGAGCCCTCGCCCGAACCCAAAGGAAGA
AGGTACCCCCTCAAAGTCTTGACTACCCCCCGGACAGACCTCTGTGCCTC
CGTGGACACACACCTTCGATGGTCGGGCCTTCGAGCGTGAGAGAGGAGCC
GCAGAAGTCGGTGAGGGGGCCGCGAGGGGCAGTGGATGTTCCCACTGGGG
CCTTTTCGAAGCCCGGCGTGCTTGGAGGGCTGAGTGTCAGCCCCTGGGTG
GTCCAGGAGGAAGAGGAGCGAGCGCAACGTGCGGAGTCGCACGCGGCCGC
CATTTCGAAGGACCCCGTGATGTTCCGGCGAAAGCGAGAGGAAGGCGGGC
TGTTGGATTACGCCGAGGAGACCCATGCCGTGAAGCGTTTTCTCGACAAG
ATACACCCGTTGAAGGACGAGTCATGCCCGCCCAAGTCAGGCTTTAGCTA
CAGGACCCCGTGATGTTCCGGCGAAAGCGAGAGGAAGGCGGGCTGTTGGA
TTACGCCGAGGAGACCCATGCCGTGAAGCGTTTTCTCGACAAGATACACC
CGTTGAAGGACGAGTCATGCCCGCCCAAGTCAGGCTTTAGCTACAGAAAG
GTCTGCCATGACACCGAGCCCCCAGACGTCTACGACACGAGCCTGGACTC
CGTCCGTCCCCGGACGGTAGGCTTTTCACCGGGGCACGTTCGAGCCTTGT
CACCTACTCCCCCGCTGACGTGGGGGGGGAGGGAGAGCTCGAGGGCCAGC
TTGGAGTGGAGGGAGGGAACCGGCGGATCTTTGGGCACCGTAAAGGCTTG
CTTAGGAGGCGCAAAGAGGGGTGGAAACAAAGGTCTGCCATGACACCGAG
CCCCCAGACGTCTACGACACGAGCCTGGACTCCGTCCGTCCCCGGACGGT
AGGCTTTTCACCGGGGCACGTTCGAGCCTTGTCACCTACTCCCCCGCTGA
CGTGGGGGGGGAGGGAGAGCTCGAGGGCCAGCTTGGAGTGGAGGGAGGGA
ACCGGCGGATCTTTGGGCACCGTAAAGGCTTGCTTAGGAGGCGCAAAGAG
GGGTGGAAACACGCATACACTCCTCTCTCTAACCGCTCATCGCATTCCTT
TGAAGGACGAAAAATTCAGCCAGTCTTGGACGGCCGAAGCGTTTCCTGCT
AGTATCGAACTTCCACGGCAGCAGCGATGGCCGAGTAACCAAGACGCAGA
AAAAGACCGTGACACCATAGAGACGCATACACTCCTCTCTCTAACCGCTC
ATCGCATTCCTTTGAAGGACGAAAAATTCAGCCAGTCTTGGACGGCCGAA
GCGTTTCCTGCTAGTATCGAACTTCCACGGCAGCAGCGATGGCCGAGTAA
CCAAGACGCAGAAAAAGACCGTGACACCATAGAGGTACGACCGATGTGGA
GCCGCCAAGGTTTGCAAACGACGCTGGGATCGTTTTCCTTCAGCTCTCCT
GTGCTGCGCCCCTACACCTCCCCGCACGACCACCTTGGAAGGCCGATGTC
CTGCGGGGTTCTGTCCCGGTCCACCTCTGGCCTCAAGCCGCAGCAGTTCG
ACACCACGCAGCGGCGATCTGAGTACACGTGCGCCCTCGTGACCAAGCGG
GAGGCGCGACTGGCGAAGGAGGCGGAGGAGAAGTTGGCGGCTAAAGTTGT
ACGACCGATGTGGAGCCGCCAAGGTTTGCAAACGACGCTGGGATCGTTTT
CCTTCAGCTCTCCTGTGCTGCGCCCCTACACCTCCCCGCACGACCACCTT
GGAAGGCCGATGTCCTGCGGGGTTCTGTCCCGGTCCACCTCTGGCCTCAA
GCCGCAGCAGTTCGACACCACGCAGCGGCGATCTGAGTACACGTGCGCCC
TCGTGACCAAGCGGGAGGCGCGACTGGCGAAGGAGGCGGAGGAGAAGTTG
GCGGCTAAAGTTGAGGAGGAGAGAAGCCGGAACGCCGCCGAAGGCAGAGA
AGGCATCGAAAAGTTCGAGAGGAGCCTAAAGGAGGTCTTGGCGCAGAAGT
GGAAGTACCTCTAGGAGGAGGAGAGAAGCCGGAACGCCGCCGAAGGCAGA
GAAGGCATCGAAAAGTTCGAGAGGAGCCTAAAGGAGGTCTTGGCGCAGAA
GTGGAAGTACCTCTAG
back to top